RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 RD3Q7Z3Z2 195 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 KMT5CQ86Y97 462 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 OR7G2Q8NG99 324 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 ZNF420Q8TAQ5 688 aaPredicted RBP7.48□□□□□ -1.21
COL21A1-212ENST00000535941 PNPT1Q8TCS8 783 aaKnown RBP7.48□□□□□ -1.21
COL21A1-212ENST00000535941 SAP25Q8TEE9 199 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 SNX19Q92543 992 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 EDAQ92838 391 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 TANKQ92844 425 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 TMEM19Q96HH6 336 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 TRNT1Q96Q11 434 aaKnown RBP7.48□□□□□ -1.21
COL21A1-212ENST00000535941 ZNF347Q96SE7 839 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 STACQ99469 402 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 WFDC6Q9BQY6 131 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 NLNQ9BYT8 704 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 HMG20AQ9NP66 347 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 MAN2C1Q9NTJ4 1040 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 FAM118AQ9NWS6 357 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 CRNNQ9UBG3 495 aaPredicted RBP7.48□□□□□ -1.21
COL21A1-212ENST00000535941 MUTYHQ9UIF7 546 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 SPEF1Q9Y4P9 236 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 CENPBD1B2RD01 187 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 CLDN25C9JDP6 229 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 IDH3BO43837 385 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 CPMP14384 443 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 PVRP15151 417 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 CBLP22681 906 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 FNTBP49356 437 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 KHKP50053 298 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 MANFP55145 182 aaKnown RBP7.48□□□□□ -1.21
COL21A1-212ENST00000535941 ISL1P61371 349 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 COPZ1P61923 177 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 BTN3A2P78410 334 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 MRPS15P82914 257 aaKnown RBP7.48□□□□□ -1.21
COL21A1-212ENST00000535941 MAP4K2Q12851 820 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 SELENBP1Q13228 472 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 ZNF750Q32MQ0 723 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 ARHGAP11BQ3KRB8 267 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 IGSF11Q5DX21 431 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 ANKRD34AQ69YU3 496 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 MFSD12Q6NUT3 480 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 CEACAM20Q6UY09 585 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 GALNT10Q86SR1 603 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 TSPYL5Q86VY4 417 aaPredicted RBP7.48□□□□□ -1.21
COL21A1-212ENST00000535941 CCDC71Q8IV32 467 aaPredicted RBP7.48□□□□□ -1.21
COL21A1-212ENST00000535941 PARP8Q8N3A8 854 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 OR5AK3PQ8NH89 298 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 GEMIN6Q8WXD5 167 aaKnown RBP7.48□□□□□ -1.21
COL21A1-212ENST00000535941 ZNF354BQ96LW1 612 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 MROQ9BYG7 248 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 SLC38A1Q9H2H9 487 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 OR51I1Q9H343 314 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 ZNF768Q9H5H4 540 aaKnown RBP7.48□□□□□ -1.21
COL21A1-212ENST00000535941 ANGPT4Q9Y264 503 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 SPAG17Q6Q759 2223 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 A0A1B0GTQ1 180 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 H0YIG0 161 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 CASC3O15234 703 aaKnown RBP7.48□□□□□ -1.21
COL21A1-212ENST00000535941 CLPXO76031 633 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 LYPD3O95274 346 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 CPNE6O95741 557 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 KRT8P05787 483 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 PROS1P07225 676 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 THRBP10828 461 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 EEF1B2P24534 225 aaKnown RBP7.48□□□□□ -1.21
COL21A1-212ENST00000535941 CD1CP29017 333 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 EPHA8P29322 1005 aaPredicted RBP7.48□□□□□ -1.21
COL21A1-212ENST00000535941 RORAP35398 523 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 NCBP2P52298 156 aaKnown RBP eCLIP7.48□□□□□ -1.21
COL21A1-212ENST00000535941 EFNA3P52797 238 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 GABARAPL2P60520 117 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 TSTA3Q13630 321 aaPredicted RBP7.48□□□□□ -1.21
COL21A1-212ENST00000535941 ZNF846Q147U1 533 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 DUSP7Q16829 419 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 RFX4Q33E94 735 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 CACTIN-AS1Q8N1I8 211 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 LRRC25Q8N386 305 aaPredicted RBP7.48□□□□□ -1.21
COL21A1-212ENST00000535941 CSNK1A1LQ8N752 337 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 PSD4Q8NDX1 1056 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 OIT3Q8WWZ8 545 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 DACT3Q96B18 629 aaPredicted RBP7.48□□□□□ -1.21
COL21A1-212ENST00000535941 EXOSC8Q96B26 276 aaKnown RBP7.48□□□□□ -1.21
COL21A1-212ENST00000535941 ZNF486Q96H40 463 aaPredicted RBP7.48□□□□□ -1.21
COL21A1-212ENST00000535941 MS4A4EQ96PG1 132 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 ALPK1Q96QP1 1244 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 ZNF350Q9GZX5 532 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 NAA50Q9GZZ1 169 aaKnown RBP7.48□□□□□ -1.21
COL21A1-212ENST00000535941 LANCL2Q9NS86 450 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 SEMA3GQ9NS98 782 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 MAT2BQ9NZL9 334 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 RAPGEFL1Q9UHV5 662 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 FBXO4Q9UKT5 387 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 A4GNTQ9UNA3 340 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 IGHV5-51A0A0C4DH38 117 aa7.47□□□□□ -1.21
COL21A1-212ENST00000535941 A0A0G2JPF8 293 aa7.47□□□□□ -1.21
COL21A1-212ENST00000535941 HNRNPCL2B2RXH8 293 aa7.47□□□□□ -1.21
COL21A1-212ENST00000535941 HNRNPCL3B7ZW38 293 aa7.47□□□□□ -1.21
COL21A1-212ENST00000535941 SUV39H1O43463 412 aa7.47□□□□□ -1.21
COL21A1-212ENST00000535941 B3GALT2O43825 422 aa7.47□□□□□ -1.21
COL21A1-212ENST00000535941 LGI1O95970 557 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms