RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 DIRAS3O95661 229 aa2.75□□□□□ -1.97
VBP1-203ENST00000535916 MT-ATP6P00846 226 aa2.75□□□□□ -1.97
VBP1-203ENST00000535916 MAGEB1P43366 347 aa2.75□□□□□ -1.97
VBP1-203ENST00000535916 GNB2P62879 340 aa2.75□□□□□ -1.97
VBP1-203ENST00000535916 AKAP17AQ02040 695 aaKnown RBP2.75□□□□□ -1.97
VBP1-203ENST00000535916 FOLH1Q04609 750 aa2.75□□□□□ -1.97
VBP1-203ENST00000535916 CETN1Q12798 172 aa2.75□□□□□ -1.97
VBP1-203ENST00000535916 ABRQ12979 859 aa2.75□□□□□ -1.97
VBP1-203ENST00000535916 LCP2Q13094 533 aa2.75□□□□□ -1.97
VBP1-203ENST00000535916 ANKRD55Q3KP44 614 aa2.75□□□□□ -1.97
VBP1-203ENST00000535916 WDR25Q64LD2 544 aaPredicted RBP2.75□□□□□ -1.97
VBP1-203ENST00000535916 OR6B2Q6IFH4 312 aa2.75□□□□□ -1.97
VBP1-203ENST00000535916 SLC25A24Q6NUK1 477 aa2.75□□□□□ -1.97
VBP1-203ENST00000535916 CASC1Q6TDU7 716 aa2.75□□□□□ -1.97
VBP1-203ENST00000535916 TOM1L2Q6ZVM7 507 aa2.75□□□□□ -1.97
VBP1-203ENST00000535916 ADAMTSL2Q86TH1 951 aa2.75□□□□□ -1.97
VBP1-203ENST00000535916 SYVN1Q86TM6 617 aa2.75□□□□□ -1.97
VBP1-203ENST00000535916 MEX3DQ86XN8 651 aaKnown RBP2.75□□□□□ -1.97
VBP1-203ENST00000535916 KDM8Q8N371 416 aa2.75□□□□□ -1.97
VBP1-203ENST00000535916 CCNYQ8ND76 341 aa2.75□□□□□ -1.97
VBP1-203ENST00000535916 OR1K1Q8NGR3 316 aa2.75□□□□□ -1.97
VBP1-203ENST00000535916 CCDC110Q8TBZ0 833 aa2.75□□□□□ -1.97
VBP1-203ENST00000535916 UBLCP1Q8WVY7 318 aaPredicted RBP2.75□□□□□ -1.97
VBP1-203ENST00000535916 RAB7BQ96AH8 199 aa2.75□□□□□ -1.97
VBP1-203ENST00000535916 C14orf79Q96F83 325 aa2.75□□□□□ -1.97
VBP1-203ENST00000535916 DTD2Q96FN9 168 aa2.75□□□□□ -1.97
VBP1-203ENST00000535916 CDKN2AIPNLQ96HQ2 116 aa2.75□□□□□ -1.97
VBP1-203ENST00000535916 TXN2Q99757 166 aa2.75□□□□□ -1.97
VBP1-203ENST00000535916 CTRCQ99895 268 aa2.75□□□□□ -1.97
VBP1-203ENST00000535916 ATG101Q9BSB4 218 aa2.75□□□□□ -1.97
VBP1-203ENST00000535916 TEX13AQ9BXU3 409 aaPredicted RBP2.75□□□□□ -1.97
VBP1-203ENST00000535916 CCSER1Q9C0I3 900 aa2.75□□□□□ -1.97
VBP1-203ENST00000535916 TSPYL1Q9H0U9 437 aa2.75□□□□□ -1.97
VBP1-203ENST00000535916 CUEDC2Q9H467 287 aa2.75□□□□□ -1.97
VBP1-203ENST00000535916 SOHLH2Q9NX45 425 aa2.75□□□□□ -1.97
VBP1-203ENST00000535916 FOXA2Q9Y261 457 aaPredicted RBP2.75□□□□□ -1.97
VBP1-203ENST00000535916 ZNFX1Q9P2E3 1918 aaKnown RBP2.74□□□□□ -1.97
VBP1-203ENST00000535916 A0A1B0GWJ7 208 aa2.74□□□□□ -1.97
VBP1-203ENST00000535916 ILVBLA1L0T0 632 aa2.74□□□□□ -1.97
VBP1-203ENST00000535916 CCDC162PA2VCL2 907 aa2.74□□□□□ -1.97
VBP1-203ENST00000535916 CFAP73A6NFT4 308 aa2.74□□□□□ -1.97
VBP1-203ENST00000535916 EFCAB7A8K855 629 aa2.74□□□□□ -1.97
VBP1-203ENST00000535916 RNF212BA8MTL3 300 aa2.74□□□□□ -1.97
VBP1-203ENST00000535916 F8WDY8 70 aa2.74□□□□□ -1.97
VBP1-203ENST00000535916 RIPK2O43353 540 aa2.74□□□□□ -1.97
VBP1-203ENST00000535916 RAD51DO75771 328 aa2.74□□□□□ -1.97
VBP1-203ENST00000535916 SNX4O95219 450 aa2.74□□□□□ -1.97
VBP1-203ENST00000535916 PRAMEF12O95522 483 aa2.74□□□□□ -1.97
VBP1-203ENST00000535916 CXCL10P02778 98 aa2.74□□□□□ -1.97
VBP1-203ENST00000535916 OPN1MWP04001 364 aa2.74□□□□□ -1.97
VBP1-203ENST00000535916 OPN1MW2P0DN77 364 aa2.74□□□□□ -1.97
VBP1-203ENST00000535916 OPN1MW3P0DN78 364 aa2.74□□□□□ -1.97
VBP1-203ENST00000535916 HSPA5P11021 654 aaKnown RBP2.74□□□□□ -1.97
VBP1-203ENST00000535916 FUT1P19526 365 aa2.74□□□□□ -1.97
VBP1-203ENST00000535916 PRPHP41219 470 aa2.74□□□□□ -1.97
VBP1-203ENST00000535916 HNMTP50135 292 aa2.74□□□□□ -1.97
VBP1-203ENST00000535916 SMSP52788 366 aa2.74□□□□□ -1.97
VBP1-203ENST00000535916 OVGP1Q12889 678 aa2.74□□□□□ -1.97
VBP1-203ENST00000535916 PSG7Q13046 419 aa2.74□□□□□ -1.97
VBP1-203ENST00000535916 TSTA3Q13630 321 aaPredicted RBP2.74□□□□□ -1.97
VBP1-203ENST00000535916 STXBP2Q15833 593 aa2.74□□□□□ -1.97
VBP1-203ENST00000535916 LRRC38Q5VT99 294 aa2.74□□□□□ -1.97
VBP1-203ENST00000535916 LYPLAL1Q5VWZ2 237 aa2.74□□□□□ -1.97
VBP1-203ENST00000535916 PHLDB2Q86SQ0 1253 aa2.74□□□□□ -1.97
VBP1-203ENST00000535916 AMZ2Q86W34 360 aa2.74□□□□□ -1.97
VBP1-203ENST00000535916 ANKRD46Q86W74 232 aa2.74□□□□□ -1.97
VBP1-203ENST00000535916 ZNF677Q86XU0 584 aa2.74□□□□□ -1.97
VBP1-203ENST00000535916 APOBEC3FQ8IUX4 373 aaKnown RBP2.74□□□□□ -1.97
VBP1-203ENST00000535916 BATF2Q8N1L9 274 aa2.74□□□□□ -1.97
VBP1-203ENST00000535916 ARL14Q8N4G2 192 aa2.74□□□□□ -1.97
VBP1-203ENST00000535916 TMEM185AQ8NFB2 350 aa2.74□□□□□ -1.97
VBP1-203ENST00000535916 SAP25Q8TEE9 199 aa2.74□□□□□ -1.97
VBP1-203ENST00000535916 CKAP2Q8WWK9 683 aa2.74□□□□□ -1.97
VBP1-203ENST00000535916 SLC5A11Q8WWX8 675 aa2.74□□□□□ -1.97
VBP1-203ENST00000535916 SEPT8Q92599 483 aa2.74□□□□□ -1.97
VBP1-203ENST00000535916 AP2M1Q96CW1 435 aa2.74□□□□□ -1.97
VBP1-203ENST00000535916 ERGIC2Q96RQ1 377 aa2.74□□□□□ -1.97
VBP1-203ENST00000535916 RASL10BQ96S79 203 aa2.74□□□□□ -1.97
VBP1-203ENST00000535916 RTBDNQ9BSG5 229 aaPredicted RBP2.74□□□□□ -1.97
VBP1-203ENST00000535916 CARD9Q9H257 536 aa2.74□□□□□ -1.97
VBP1-203ENST00000535916 DPH5Q9H2P9 285 aa2.74□□□□□ -1.97
VBP1-203ENST00000535916 TMEM245Q9H330 911 aa2.74□□□□□ -1.97
VBP1-203ENST00000535916 DPEP3Q9H4B8 488 aa2.74□□□□□ -1.97
VBP1-203ENST00000535916 COQ10BQ9H8M1 238 aa2.74□□□□□ -1.97
VBP1-203ENST00000535916 ECT2Q9H8V3 914 aa2.74□□□□□ -1.97
VBP1-203ENST00000535916 NGBQ9NPG2 151 aa2.74□□□□□ -1.97
VBP1-203ENST00000535916 FAM212BQ9NTI7 297 aaPredicted RBP2.74□□□□□ -1.97
VBP1-203ENST00000535916 KLHL21Q9UJP4 597 aa2.74□□□□□ -1.97
VBP1-203ENST00000535916 KLK12Q9UKR0 248 aa2.74□□□□□ -1.97
VBP1-203ENST00000535916 KCNK6Q9Y257 313 aa2.74□□□□□ -1.97
VBP1-203ENST00000535916 NUDCQ9Y266 331 aa2.74□□□□□ -1.97
VBP1-203ENST00000535916 CLRN2A0PK11 232 aa2.73□□□□□ -1.97
VBP1-203ENST00000535916 FAM149AA5PLN7 773 aa2.73□□□□□ -1.97
VBP1-203ENST00000535916 PDXKO00764 312 aa2.73□□□□□ -1.97
VBP1-203ENST00000535916 SPAG6O75602 509 aa2.73□□□□□ -1.97
VBP1-203ENST00000535916 PALMO75781 387 aa2.73□□□□□ -1.97
VBP1-203ENST00000535916 AKR7A3O95154 331 aa2.73□□□□□ -1.97
VBP1-203ENST00000535916 OR6A2O95222 327 aa2.73□□□□□ -1.97
VBP1-203ENST00000535916 PGK2P07205 417 aa2.73□□□□□ -1.97
VBP1-203ENST00000535916 MMP10P09238 476 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms