RNA–Protein interactions for RNA: ENST00000535601.5

HTATSF1-204, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 3,019 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-204ENST00000535601 ZNF311Q5JNZ3 666 aa17.1■□□□□ 0.33
HTATSF1-204ENST00000535601 C19orf47Q8N9M1 422 aaKnown RBP17.1■□□□□ 0.33
HTATSF1-204ENST00000535601 DRAXINQ8NBI3 349 aaPredicted RBP17.1■□□□□ 0.33
HTATSF1-204ENST00000535601 ADAMTS16Q8TE57 1224 aa17.1■□□□□ 0.33
HTATSF1-204ENST00000535601 POP5Q969H6 163 aaKnown RBP17.1■□□□□ 0.33
HTATSF1-204ENST00000535601 ZNF764Q96H86 408 aaPredicted RBP17.1■□□□□ 0.33
HTATSF1-204ENST00000535601 PEX11GQ96HA9 241 aa17.1■□□□□ 0.33
HTATSF1-204ENST00000535601 PTTG2Q9NZH5 202 aa17.1■□□□□ 0.33
HTATSF1-204ENST00000535601 GALR3O60755 368 aaPredicted RBP17.1■□□□□ 0.33
HTATSF1-204ENST00000535601 GSTM5P46439 218 aa17.1■□□□□ 0.33
HTATSF1-204ENST00000535601 MLLT1Q03111 559 aaPredicted RBP17.1■□□□□ 0.33
HTATSF1-204ENST00000535601 PTGES3Q15185 160 aaKnown RBP17.1■□□□□ 0.33
HTATSF1-204ENST00000535601 COLEC12Q5KU26 742 aa17.1■□□□□ 0.33
HTATSF1-204ENST00000535601 FIGNL1Q6PIW4 674 aa17.1■□□□□ 0.33
HTATSF1-204ENST00000535601 RNF44Q7L0R7 432 aa17.1■□□□□ 0.33
HTATSF1-204ENST00000535601 CA13Q8N1Q1 262 aa17.1■□□□□ 0.33
HTATSF1-204ENST00000535601 HRASLS5Q96KN8 279 aa17.1■□□□□ 0.33
HTATSF1-204ENST00000535601 ZNF556Q9HAH1 456 aa17.1■□□□□ 0.33
HTATSF1-204ENST00000535601 SOHLH2Q9NX45 425 aa17.1■□□□□ 0.33
HTATSF1-204ENST00000535601 MAU2Q9Y6X3 613 aa17.1■□□□□ 0.33
HTATSF1-204ENST00000535601 IGHV5-51A0A0C4DH38 117 aa17.1■□□□□ 0.33
HTATSF1-204ENST00000535601 H1F0P07305 194 aaKnown RBP17.1■□□□□ 0.33
HTATSF1-204ENST00000535601 NME1P15531 152 aaKnown RBP17.1■□□□□ 0.33
HTATSF1-204ENST00000535601 HOXB6P17509 224 aaKnown RBP17.1■□□□□ 0.33
HTATSF1-204ENST00000535601 CBLP22681 906 aa17.1■□□□□ 0.33
HTATSF1-204ENST00000535601 TLX1P31314 330 aaPredicted RBP17.1■□□□□ 0.33
HTATSF1-204ENST00000535601 MFSD12Q6NUT3 480 aa17.1■□□□□ 0.33
HTATSF1-204ENST00000535601 TMEM64Q6YI46 380 aa17.1■□□□□ 0.33
HTATSF1-204ENST00000535601 KRT73Q86Y46 540 aa17.1■□□□□ 0.33
HTATSF1-204ENST00000535601 MCATQ8IVS2 390 aaKnown RBP17.1■□□□□ 0.33
HTATSF1-204ENST00000535601 SETD9Q8NE22 299 aa17.1■□□□□ 0.33
HTATSF1-204ENST00000535601 GPA33Q99795 319 aa17.1■□□□□ 0.33
HTATSF1-204ENST00000535601 OR5K4A6NMS3 321 aa17.09■□□□□ 0.33
HTATSF1-204ENST00000535601 CYR61O00622 381 aa17.09■□□□□ 0.33
HTATSF1-204ENST00000535601 PDE9AO76083 593 aa17.09■□□□□ 0.33
HTATSF1-204ENST00000535601 ACP2P11117 423 aa17.09■□□□□ 0.33
HTATSF1-204ENST00000535601 CHMP24386 653 aa17.09■□□□□ 0.33
HTATSF1-204ENST00000535601 TSFMP43897 325 aaKnown RBP17.09■□□□□ 0.33
HTATSF1-204ENST00000535601 TARDBPQ13148 414 aaKnown RBP eCLIP17.09■□□□□ 0.33
HTATSF1-204ENST00000535601 ZNF770Q6IQ21 691 aaPredicted RBP17.09■□□□□ 0.33
HTATSF1-204ENST00000535601 PODNL1Q6PEZ8 512 aa17.09■□□□□ 0.33
HTATSF1-204ENST00000535601 BORAQ6PGQ7 559 aa17.09■□□□□ 0.33
HTATSF1-204ENST00000535601 USP53Q70EK8 1073 aa17.09■□□□□ 0.33
HTATSF1-204ENST00000535601 GABARAPL3Q9BY60 117 aa17.09■□□□□ 0.33
HTATSF1-204ENST00000535601 GPR83Q9NYM4 423 aa17.09■□□□□ 0.33
HTATSF1-204ENST00000535601 ZNF226Q9NYT6 803 aa17.09■□□□□ 0.33
HTATSF1-204ENST00000535601 PHF11Q9UIL8 331 aa17.09■□□□□ 0.33
HTATSF1-204ENST00000535601 PCDHGA10Q9Y5H3 936 aa17.09■□□□□ 0.33
HTATSF1-204ENST00000535601 ENTPD2Q9Y5L3 495 aa17.09■□□□□ 0.33
HTATSF1-204ENST00000535601 SNX5Q9Y5X3 404 aa17.09■□□□□ 0.33
HTATSF1-204ENST00000535601 URADA6NGE7 173 aa17.09■□□□□ 0.33
HTATSF1-204ENST00000535601 H3BN98 237 aa17.09■□□□□ 0.33
HTATSF1-204ENST00000535601 TGFBR3LH3BV60 316 aa17.09■□□□□ 0.33
HTATSF1-204ENST00000535601 PDGFBP01127 241 aaPredicted RBP17.09■□□□□ 0.33
HTATSF1-204ENST00000535601 PORP16435 677 aaPredicted RBP17.09■□□□□ 0.33
HTATSF1-204ENST00000535601 TNNI3P19429 210 aa17.09■□□□□ 0.33
HTATSF1-204ENST00000535601 CTSKP43235 329 aa17.09■□□□□ 0.33
HTATSF1-204ENST00000535601 GP2P55259 537 aaKnown RBP17.09■□□□□ 0.33
HTATSF1-204ENST00000535601 BTG2P78543 158 aa17.09■□□□□ 0.33
HTATSF1-204ENST00000535601 DCST1Q5T197 706 aa17.09■□□□□ 0.33
HTATSF1-204ENST00000535601 IQCHQ86VS3 1027 aa17.09■□□□□ 0.33
HTATSF1-204ENST00000535601 Q8N9G6 341 aaPredicted RBP17.09■□□□□ 0.33
HTATSF1-204ENST00000535601 OR13F1Q8NGS4 319 aa17.09■□□□□ 0.33
HTATSF1-204ENST00000535601 FBLIM1Q8WUP2 373 aa17.09■□□□□ 0.33
HTATSF1-204ENST00000535601 YTHDF1Q9BYJ9 559 aaKnown RBP17.09■□□□□ 0.33
HTATSF1-204ENST00000535601 SEMA6CQ9H3T2 930 aa17.09■□□□□ 0.33
HTATSF1-204ENST00000535601 TMEM184BQ9Y519 407 aaPredicted RBP17.09■□□□□ 0.33
HTATSF1-204ENST00000535601 A8MU76 341 aa17.08■□□□□ 0.33
HTATSF1-204ENST00000535601 A8MVJ9 347 aa17.08■□□□□ 0.33
HTATSF1-204ENST00000535601 CHST10O43529 356 aa17.08■□□□□ 0.33
HTATSF1-204ENST00000535601 UGT2B17O75795 530 aa17.08■□□□□ 0.33
HTATSF1-204ENST00000535601 CPNE6O95741 557 aa17.08■□□□□ 0.33
HTATSF1-204ENST00000535601 LCKP06239 509 aa17.08■□□□□ 0.33
HTATSF1-204ENST00000535601 PROS1P07225 676 aa17.08■□□□□ 0.33
HTATSF1-204ENST00000535601 PCMT1P22061 227 aa17.08■□□□□ 0.33
HTATSF1-204ENST00000535601 CNR2P34972 360 aa17.08■□□□□ 0.33
HTATSF1-204ENST00000535601 TRHRP34981 398 aaPredicted RBP17.08■□□□□ 0.33
HTATSF1-204ENST00000535601 TGFBR1P36897 503 aa17.08■□□□□ 0.33
HTATSF1-204ENST00000535601 ELOCQ15369 112 aa17.08■□□□□ 0.33
HTATSF1-204ENST00000535601 SFXN5Q8TD22 340 aa17.08■□□□□ 0.33
HTATSF1-204ENST00000535601 MSANTD3Q96H12 275 aa17.08■□□□□ 0.33
HTATSF1-204ENST00000535601 GUCD1Q96NT3 240 aa17.08■□□□□ 0.33
HTATSF1-204ENST00000535601 ACTRT3Q9BYD9 372 aa17.08■□□□□ 0.33
HTATSF1-204ENST00000535601 TWSG1Q9GZX9 223 aa17.08■□□□□ 0.33
HTATSF1-204ENST00000535601 MAN2C1Q9NTJ4 1040 aa17.08■□□□□ 0.33
HTATSF1-204ENST00000535601 TMEM9Q9P0T7 183 aa17.08■□□□□ 0.33
HTATSF1-204ENST00000535601 KCND3Q9UK17 655 aa17.08■□□□□ 0.33
HTATSF1-204ENST00000535601 SYNDIG1LA6NDD5 238 aa17.08■□□□□ 0.32
HTATSF1-204ENST00000535601 AQP9O43315 295 aa17.08■□□□□ 0.32
HTATSF1-204ENST00000535601 BCAS1O75363 584 aaPredicted RBP17.08■□□□□ 0.32
HTATSF1-204ENST00000535601 ANXA8P13928 327 aa17.08■□□□□ 0.32
HTATSF1-204ENST00000535601 GGT2P36268 569 aa17.08■□□□□ 0.32
HTATSF1-204ENST00000535601 STT3AP46977 705 aa17.08■□□□□ 0.32
HTATSF1-204ENST00000535601 SLC35A2P78381 396 aa17.08■□□□□ 0.32
HTATSF1-204ENST00000535601 MAP4K2Q12851 820 aa17.08■□□□□ 0.32
HTATSF1-204ENST00000535601 CEBPEQ15744 281 aa17.08■□□□□ 0.32
HTATSF1-204ENST00000535601 BHLHB9Q6PI77 547 aa17.08■□□□□ 0.32
HTATSF1-204ENST00000535601 ZAR1Q86SH2 424 aa17.08■□□□□ 0.32
HTATSF1-204ENST00000535601 DTNBP1Q96EV8 351 aa17.08■□□□□ 0.32
HTATSF1-204ENST00000535601 BLOC1S6Q9UL45 172 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms