RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 MAPRE3Q9UPY8 281 aa20.92■□□□□ 0.94
SFSWAP-204ENST00000535399 A0A1W2PRB8 838 aa20.91■□□□□ 0.94
SFSWAP-204ENST00000535399 G3V3Y1 287 aa20.91■□□□□ 0.94
SFSWAP-204ENST00000535399 ERN1O75460 977 aaKnown RBP20.91■□□□□ 0.94
SFSWAP-204ENST00000535399 P04436 131 aa20.91■□□□□ 0.94
SFSWAP-204ENST00000535399 NAGAP17050 411 aa20.91■□□□□ 0.94
SFSWAP-204ENST00000535399 RELNP78509 3460 aa20.91■□□□□ 0.94
SFSWAP-204ENST00000535399 ZNF155Q12901 538 aaPredicted RBP20.91■□□□□ 0.94
SFSWAP-204ENST00000535399 RGS9BPQ6ZS82 235 aa20.91■□□□□ 0.94
SFSWAP-204ENST00000535399 SIAH3Q8IW03 269 aa20.91■□□□□ 0.94
SFSWAP-204ENST00000535399 FAM13CQ8NE31 585 aa20.91■□□□□ 0.94
SFSWAP-204ENST00000535399 OR2M7Q8NG81 312 aa20.91■□□□□ 0.94
SFSWAP-204ENST00000535399 OR5M3Q8NGP4 307 aa20.91■□□□□ 0.94
SFSWAP-204ENST00000535399 OR5P2Q8WZ92 322 aa20.91■□□□□ 0.94
SFSWAP-204ENST00000535399 OMA1Q96E52 524 aa20.91■□□□□ 0.94
SFSWAP-204ENST00000535399 BHLHE41Q9C0J9 482 aaPredicted RBP20.91■□□□□ 0.94
SFSWAP-204ENST00000535399 PROK2Q9HC23 129 aa20.91■□□□□ 0.94
SFSWAP-204ENST00000535399 UBR5O95071 2799 aaPredicted RBP20.91■□□□□ 0.94
SFSWAP-204ENST00000535399 PPM1BO75688 479 aa20.9■□□□□ 0.94
SFSWAP-204ENST00000535399 ABCB1P08183 1280 aaPredicted RBP20.9■□□□□ 0.94
SFSWAP-204ENST00000535399 PIGAP37287 484 aa20.9■□□□□ 0.94
SFSWAP-204ENST00000535399 RFC3P40938 356 aa20.9■□□□□ 0.94
SFSWAP-204ENST00000535399 TMED10P49755 219 aaKnown RBP20.9■□□□□ 0.94
SFSWAP-204ENST00000535399 WNT3P56703 355 aa20.9■□□□□ 0.94
SFSWAP-204ENST00000535399 ALDH6A1Q02252 535 aaKnown RBP20.9■□□□□ 0.94
SFSWAP-204ENST00000535399 RPS6KA2Q15349 733 aa20.9■□□□□ 0.94
SFSWAP-204ENST00000535399 EPGNQ6UW88 154 aa20.9■□□□□ 0.94
SFSWAP-204ENST00000535399 SLC34A3Q8N130 599 aa20.9■□□□□ 0.94
SFSWAP-204ENST00000535399 FBXW8Q8N3Y1 598 aa20.9■□□□□ 0.94
SFSWAP-204ENST00000535399 SPPL2AQ8TCT8 520 aa20.9■□□□□ 0.94
SFSWAP-204ENST00000535399 OR52B2Q96RD2 323 aa20.9■□□□□ 0.94
SFSWAP-204ENST00000535399 FAM173AQ9BQD7 235 aa20.9■□□□□ 0.94
SFSWAP-204ENST00000535399 DUSP26Q9BV47 211 aa20.9■□□□□ 0.94
SFSWAP-204ENST00000535399 GPR45Q9Y5Y3 372 aa20.9■□□□□ 0.94
SFSWAP-204ENST00000535399 ANKUB1A6NFN9 424 aa20.89■□□□□ 0.93
SFSWAP-204ENST00000535399 ATP8B1O43520 1251 aa20.89■□□□□ 0.93
SFSWAP-204ENST00000535399 C6orf47O95873 294 aa20.89■□□□□ 0.93
SFSWAP-204ENST00000535399 PSG6Q00889 435 aa20.89■□□□□ 0.93
SFSWAP-204ENST00000535399 KCNC4Q03721 635 aa20.89■□□□□ 0.93
SFSWAP-204ENST00000535399 PLCXD2Q0VAA5 305 aa20.89■□□□□ 0.93
SFSWAP-204ENST00000535399 FOXO1Q12778 655 aa20.89■□□□□ 0.93
SFSWAP-204ENST00000535399 PGS1Q32NB8 556 aa20.89■□□□□ 0.93
SFSWAP-204ENST00000535399 NXNQ6DKJ4 435 aa20.89■□□□□ 0.93
SFSWAP-204ENST00000535399 FAM47EQ6ZV65 393 aa20.89■□□□□ 0.93
SFSWAP-204ENST00000535399 SLC44A2Q8IWA5 706 aaPredicted RBP20.89■□□□□ 0.93
SFSWAP-204ENST00000535399 PSMA8Q8TAA3 256 aa20.89■□□□□ 0.93
SFSWAP-204ENST00000535399 HOXB13Q92826 284 aaPredicted RBP20.89■□□□□ 0.93
SFSWAP-204ENST00000535399 TMBIM1Q969X1 311 aa20.89■□□□□ 0.93
SFSWAP-204ENST00000535399 TESCQ96BS2 214 aa20.89■□□□□ 0.93
SFSWAP-204ENST00000535399 TEX37Q96LM6 180 aa20.89■□□□□ 0.93
SFSWAP-204ENST00000535399 CNIH4Q9P003 139 aa20.89■□□□□ 0.93
SFSWAP-204ENST00000535399 POLEQ07864 2286 aa20.88■□□□□ 0.93
SFSWAP-204ENST00000535399 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.88■□□□□ 0.93
SFSWAP-204ENST00000535399 TP53I11O14683 189 aa20.88■□□□□ 0.93
SFSWAP-204ENST00000535399 DIAPH2O60879 1101 aa20.88■□□□□ 0.93
SFSWAP-204ENST00000535399 TGDSO95455 350 aa20.88■□□□□ 0.93
SFSWAP-204ENST00000535399 ZNF24P17028 368 aa20.88■□□□□ 0.93
SFSWAP-204ENST00000535399 DNASE1L1P49184 302 aa20.88■□□□□ 0.93
SFSWAP-204ENST00000535399 UFM1P61960 85 aa20.88■□□□□ 0.93
SFSWAP-204ENST00000535399 PRAMEF20Q5VT98 475 aa20.88■□□□□ 0.93
SFSWAP-204ENST00000535399 TMEM198Q66K66 360 aa20.88■□□□□ 0.93
SFSWAP-204ENST00000535399 DESI1Q6ICB0 168 aa20.88■□□□□ 0.93
SFSWAP-204ENST00000535399 OR4F3Q6IEY1 312 aa20.88■□□□□ 0.93
SFSWAP-204ENST00000535399 GK5Q6ZS86 529 aa20.88■□□□□ 0.93
SFSWAP-204ENST00000535399 WDR53Q7Z5U6 358 aaPredicted RBP20.88■□□□□ 0.93
SFSWAP-204ENST00000535399 NUP43Q8NFH3 380 aa20.88■□□□□ 0.93
SFSWAP-204ENST00000535399 OR8J2Q8NGG1 315 aa20.88■□□□□ 0.93
SFSWAP-204ENST00000535399 CEP70Q8NHQ1 597 aa20.88■□□□□ 0.93
SFSWAP-204ENST00000535399 HGDQ93099 445 aa20.88■□□□□ 0.93
SFSWAP-204ENST00000535399 GIMAP5Q96F15 307 aa20.88■□□□□ 0.93
SFSWAP-204ENST00000535399 SECISBP2Q96T21 854 aaKnown RBP20.88■□□□□ 0.93
SFSWAP-204ENST00000535399 LMF2Q9BU23 707 aaKnown RBP20.88■□□□□ 0.93
SFSWAP-204ENST00000535399 TSPAN10Q9H1Z9 355 aaPredicted RBP20.88■□□□□ 0.93
SFSWAP-204ENST00000535399 CLMPQ9H6B4 373 aa20.88■□□□□ 0.93
SFSWAP-204ENST00000535399 C3orf14Q9HBI5 128 aa20.88■□□□□ 0.93
SFSWAP-204ENST00000535399 MED4Q9NPJ6 270 aa20.88■□□□□ 0.93
SFSWAP-204ENST00000535399 NPIPA5E9PKD4 350 aa20.87■□□□□ 0.93
SFSWAP-204ENST00000535399 EMC8O43402 210 aa20.87■□□□□ 0.93
SFSWAP-204ENST00000535399 UGT2B11O75310 529 aa20.87■□□□□ 0.93
SFSWAP-204ENST00000535399 GLSO94925 669 aaPredicted RBP20.87■□□□□ 0.93
SFSWAP-204ENST00000535399 IL12AP29459 219 aa20.87■□□□□ 0.93
SFSWAP-204ENST00000535399 MAP3K8P41279 467 aa20.87■□□□□ 0.93
SFSWAP-204ENST00000535399 IDH3AP50213 366 aa20.87■□□□□ 0.93
SFSWAP-204ENST00000535399 CLNS1AP54105 237 aaKnown RBP20.87■□□□□ 0.93
SFSWAP-204ENST00000535399 PRKAG1P54619 331 aa20.87■□□□□ 0.93
SFSWAP-204ENST00000535399 NME5P56597 212 aa20.87■□□□□ 0.93
SFSWAP-204ENST00000535399 PSPHP78330 225 aa20.87■□□□□ 0.93
SFSWAP-204ENST00000535399 PHC1P78364 1004 aa20.87■□□□□ 0.93
SFSWAP-204ENST00000535399 LSM12Q3MHD2 195 aaKnown RBP20.87■□□□□ 0.93
SFSWAP-204ENST00000535399 NUP54Q7Z3B4 507 aa20.87■□□□□ 0.93
SFSWAP-204ENST00000535399 OR4N2Q8NGD1 307 aa20.87■□□□□ 0.93
SFSWAP-204ENST00000535399 NTNG2Q96CW9 530 aa20.87■□□□□ 0.93
SFSWAP-204ENST00000535399 FAM120BQ96EK7 910 aaKnown RBP20.87■□□□□ 0.93
SFSWAP-204ENST00000535399 GPR137Q96N19 417 aa20.87■□□□□ 0.93
SFSWAP-204ENST00000535399 CXorf36Q9H7Y0 433 aa20.87■□□□□ 0.93
SFSWAP-204ENST00000535399 EQTNQ9NQ60 294 aa20.87■□□□□ 0.93
SFSWAP-204ENST00000535399 TUBA8Q9NY65 449 aaPredicted RBP20.87■□□□□ 0.93
SFSWAP-204ENST00000535399 NPIPA1Q9UND3 350 aa20.87■□□□□ 0.93
SFSWAP-204ENST00000535399 TENM4Q6N022 2769 aa20.87■□□□□ 0.93
SFSWAP-204ENST00000535399 SVILO95425 2214 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms