RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 STARP49675 285 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 AGTR2P50052 363 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 CLCN2P51788 898 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 HNRNPFP52597 415 aaKnown RBP2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 TUBA4AP68366 448 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 MPP1Q00013 466 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 SORDQ00796 357 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 PRDX1Q06830 199 aaKnown RBP2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 CRYZQ08257 329 aaKnown RBP2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 FHL1Q13642 323 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 POU6F1Q14863 301 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 STX1AQ16623 288 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 NDUFA9Q16795 377 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 HADHQ16836 314 aaKnown RBP2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 TMEM249Q2WGJ8 235 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 GPR33Q49SQ1 333 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 DEFB134Q4QY38 66 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 EIPR1Q53HC9 387 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 EEF1AKMT2Q5JPI9 291 aaKnown RBP2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 FAM120AOSQ5T036 256 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 NDUFAF5Q5TEU4 345 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 PRAMEF20Q5VT98 475 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 GARNL3Q5VVW2 1013 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 NSUN5P2Q63ZY6 315 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 ICE2Q659A1 982 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 ZNF626Q68DY1 528 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 SLC9A4Q6AI14 798 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 VWA1Q6PCB0 445 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 DARS2Q6PI48 645 aaKnown RBP2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 MFSD7Q6UXD7 560 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 TMEM64Q6YI46 380 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 ZNF704Q6ZNC4 412 aaPredicted RBP2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 RGS9BPQ6ZS82 235 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 CLNKQ7Z7G1 428 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 MAP7D3Q8IWC1 876 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 DCUN1D3Q8IWE4 304 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 GCNT2Q8N0V5 402 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 RASGEF1CQ8N431 466 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 C3orf56Q8N813 242 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 NIPA2Q8N8Q9 360 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 ZNF441Q8N8Z8 693 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 MLKLQ8NB16 471 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 SVIPQ8NHG7 77 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 RAB3IL1Q8TBN0 382 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 MAGEC3Q8TD91 643 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 HEXDCQ8WVB3 486 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 TMEM171Q8WVE6 324 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 SLC13A3Q8WWT9 602 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 AKAP1Q92667 903 aaKnown RBP eCLIP2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 SYN2Q92777 582 aaPredicted RBP2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 RERGQ96A58 199 aaPredicted RBP2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 RAD51AP1Q96B01 352 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 TBC1D20Q96BZ9 403 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 TM4SF19Q96DZ7 209 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 WDYHV1Q96HA8 205 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 ART5Q96L15 291 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 FAM111AQ96PZ2 611 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 TUBA1CQ9BQE3 449 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 ZNF670Q9BS34 389 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 MED18Q9BUE0 208 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 RAB11FIP5Q9BXF6 653 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 FSD1LQ9BXM9 530 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 PACSIN1Q9BY11 444 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 UGT2B28Q9BY64 529 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 ANGPTL4Q9BY76 406 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 KRTAP1-5Q9BYS1 174 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 SHARPINQ9H0F6 387 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 ISCUQ9H1K1 167 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 OPN3Q9H1Y3 402 aaPredicted RBP2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 KLHL31Q9H511 634 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 VPS37BQ9H9H4 285 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 MRPL47Q9HD33 250 aaKnown RBP2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 HOMER3Q9NSC5 361 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 NLE1Q9NVX2 485 aaPredicted RBP2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 FAM30AQ9NZY2 134 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 NIPSNAP3AQ9UFN0 247 aaPredicted RBP2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 NDRG3Q9UGV2 375 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 RSPH14Q9UHP6 348 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 YARS2Q9Y2Z4 477 aaKnown RBP2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 ATG4BQ9Y4P1 393 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 CLDN16Q9Y5I7 305 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 COMMD10Q9Y6G5 202 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 IGKV3D-11A0A0A0MRZ8 115 aa2.67□□□□□ -1.98
CHMP4A-208ENST00000534106 TNFSF12-TNFSF13A0A0A6YY99 330 aa2.67□□□□□ -1.98
CHMP4A-208ENST00000534106 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.67□□□□□ -1.98
CHMP4A-208ENST00000534106 MBD3L3A6NE82 208 aaPredicted RBP2.67□□□□□ -1.98
CHMP4A-208ENST00000534106 LINC00473A8K010 186 aa2.67□□□□□ -1.98
CHMP4A-208ENST00000534106 SMTNL1A8MU46 457 aa2.67□□□□□ -1.98
CHMP4A-208ENST00000534106 C4orf51C9J302 202 aa2.67□□□□□ -1.98
CHMP4A-208ENST00000534106 UBFD1O14562 309 aaKnown RBP2.67□□□□□ -1.98
CHMP4A-208ENST00000534106 KPNA5O15131 536 aa2.67□□□□□ -1.98
CHMP4A-208ENST00000534106 TP73O15350 636 aa2.67□□□□□ -1.98
CHMP4A-208ENST00000534106 LMX1BO60663 402 aa2.67□□□□□ -1.98
CHMP4A-208ENST00000534106 CST8O60676 142 aa2.67□□□□□ -1.98
CHMP4A-208ENST00000534106 GALR3O60755 368 aaPredicted RBP2.67□□□□□ -1.98
CHMP4A-208ENST00000534106 VPS26AO75436 327 aa2.67□□□□□ -1.98
CHMP4A-208ENST00000534106 SNRNP200O75643 2136 aaKnown RBP2.67□□□□□ -1.98
CHMP4A-208ENST00000534106 TNFSF13O75888 250 aa2.67□□□□□ -1.98
CHMP4A-208ENST00000534106 TUSC2O75896 110 aa2.67□□□□□ -1.98
CHMP4A-208ENST00000534106 PROSCO94903 275 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms