RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 AHSPQ9NZD4 102 aa18.23■□□□□ 0.51
CAPN1-226ENST00000533820 TCF20Q9UGU0 1960 aaKnown RBP18.23■□□□□ 0.51
CAPN1-226ENST00000533820 A0A1W2PS29 197 aa18.23■□□□□ 0.51
CAPN1-226ENST00000533820 C6P13671 934 aa18.23■□□□□ 0.51
CAPN1-226ENST00000533820 ZNF250P15622 560 aa18.23■□□□□ 0.51
CAPN1-226ENST00000533820 MLLT11Q13015 90 aaPredicted RBP18.23■□□□□ 0.51
CAPN1-226ENST00000533820 LASP1Q14847 261 aaKnown RBP18.23■□□□□ 0.51
CAPN1-226ENST00000533820 TCEA2Q15560 299 aa18.23■□□□□ 0.51
CAPN1-226ENST00000533820 C12orf40Q86WS4 652 aa18.23■□□□□ 0.51
CAPN1-226ENST00000533820 SLAIN1Q8ND83 568 aa18.23■□□□□ 0.51
CAPN1-226ENST00000533820 PXYLP1Q8TE99 480 aa18.23■□□□□ 0.51
CAPN1-226ENST00000533820 TTC9Q92623 222 aa18.23■□□□□ 0.51
CAPN1-226ENST00000533820 WDR34Q96EX3 536 aa18.23■□□□□ 0.51
CAPN1-226ENST00000533820 TEFMQ96QE5 360 aaKnown RBP18.23■□□□□ 0.51
CAPN1-226ENST00000533820 DCLRE1CQ96SD1 692 aaKnown RBP18.23■□□□□ 0.51
CAPN1-226ENST00000533820 TMED9Q9BVK6 235 aa18.23■□□□□ 0.51
CAPN1-226ENST00000533820 HDHD5Q9BXW7 423 aa18.23■□□□□ 0.51
CAPN1-226ENST00000533820 KCNN2Q9H2S1 579 aa18.23■□□□□ 0.51
CAPN1-226ENST00000533820 ERVMER34-1Q9H9K5 563 aa18.23■□□□□ 0.51
CAPN1-226ENST00000533820 A4GALTQ9NPC4 353 aa18.23■□□□□ 0.51
CAPN1-226ENST00000533820 FBXW2Q9UKT8 454 aa18.23■□□□□ 0.51
CAPN1-226ENST00000533820 SLC35F4A4IF30 521 aa18.22■□□□□ 0.51
CAPN1-226ENST00000533820 OR5K3A6NET4 321 aa18.22■□□□□ 0.51
CAPN1-226ENST00000533820 HIDE1A8MVS5 230 aa18.22■□□□□ 0.51
CAPN1-226ENST00000533820 LAG3P18627 525 aa18.22■□□□□ 0.51
CAPN1-226ENST00000533820 BSGP35613 385 aa18.22■□□□□ 0.51
CAPN1-226ENST00000533820 SOX9P48436 509 aa18.22■□□□□ 0.51
CAPN1-226ENST00000533820 TOR1AIP1Q5JTV8 583 aa18.22■□□□□ 0.51
CAPN1-226ENST00000533820 MAMSTRQ6ZN01 415 aa18.22■□□□□ 0.51
CAPN1-226ENST00000533820 TMEM151BQ8IW70 566 aa18.22■□□□□ 0.51
CAPN1-226ENST00000533820 KLHDC8AQ8IYD2 350 aa18.22■□□□□ 0.51
CAPN1-226ENST00000533820 VWCEQ96DN2 955 aa18.22■□□□□ 0.51
CAPN1-226ENST00000533820 MSANTD3Q96H12 275 aa18.22■□□□□ 0.51
CAPN1-226ENST00000533820 TRMT61BQ9BVS5 477 aaKnown RBP18.22■□□□□ 0.51
CAPN1-226ENST00000533820 XKR8Q9H6D3 395 aa18.22■□□□□ 0.51
CAPN1-226ENST00000533820 A0A0B4J293 547 aa18.22■□□□□ 0.51
CAPN1-226ENST00000533820 I3L521 148 aa18.22■□□□□ 0.51
CAPN1-226ENST00000533820 SPINT1O43278 529 aa18.22■□□□□ 0.51
CAPN1-226ENST00000533820 AKR7A2O43488 359 aa18.22■□□□□ 0.51
CAPN1-226ENST00000533820 ZNF254O75437 659 aa18.22■□□□□ 0.51
CAPN1-226ENST00000533820 RAB36O95755 333 aa18.22■□□□□ 0.51
CAPN1-226ENST00000533820 YES1P07947 543 aa18.22■□□□□ 0.51
CAPN1-226ENST00000533820 MYL9P24844 172 aa18.22■□□□□ 0.51
CAPN1-226ENST00000533820 MAN2A2P49641 1150 aa18.22■□□□□ 0.51
CAPN1-226ENST00000533820 FAM129CQ86XR2 697 aa18.22■□□□□ 0.51
CAPN1-226ENST00000533820 ENKURQ8TC29 256 aa18.22■□□□□ 0.51
CAPN1-226ENST00000533820 RNF31Q96EP0 1072 aa18.22■□□□□ 0.51
CAPN1-226ENST00000533820 RNFT2Q96EX2 444 aa18.22■□□□□ 0.51
CAPN1-226ENST00000533820 SLC22A4Q9H015 551 aa18.22■□□□□ 0.51
CAPN1-226ENST00000533820 SNX7Q9UNH6 387 aa18.22■□□□□ 0.51
CAPN1-226ENST00000533820 PRR23AA6NEV1 266 aa18.21■□□□□ 0.51
CAPN1-226ENST00000533820 GALNT11Q8NCW6 608 aa18.21■□□□□ 0.51
CAPN1-226ENST00000533820 UBE2E3Q969T4 207 aa18.21■□□□□ 0.51
CAPN1-226ENST00000533820 RAD51AP1Q96B01 352 aa18.21■□□□□ 0.51
CAPN1-226ENST00000533820 ART5Q96L15 291 aa18.21■□□□□ 0.51
CAPN1-226ENST00000533820 KCTD7Q96MP8 289 aa18.21■□□□□ 0.51
CAPN1-226ENST00000533820 SMAD5Q99717 465 aaKnown RBP18.21■□□□□ 0.51
CAPN1-226ENST00000533820 TMEM39AQ9NV64 488 aa18.21■□□□□ 0.51
CAPN1-226ENST00000533820 NDRG2Q9UN36 371 aaKnown RBP18.21■□□□□ 0.51
CAPN1-226ENST00000533820 DOCK9Q9BZ29 2069 aa18.21■□□□□ 0.51
CAPN1-226ENST00000533820 NOTCH4Q99466 2003 aa18.21■□□□□ 0.51
CAPN1-226ENST00000533820 ARRDC5A6NEK1 342 aa18.21■□□□□ 0.51
CAPN1-226ENST00000533820 CASKO14936 926 aa18.21■□□□□ 0.51
CAPN1-226ENST00000533820 TSC22D2O75157 780 aa18.21■□□□□ 0.51
CAPN1-226ENST00000533820 ZNF780AO75290 641 aaPredicted RBP18.21■□□□□ 0.51
CAPN1-226ENST00000533820 POU3F3P20264 500 aaPredicted RBP18.21■□□□□ 0.51
CAPN1-226ENST00000533820 KIR2DL3P43628 341 aa18.21■□□□□ 0.51
CAPN1-226ENST00000533820 ST8SIA6P61647 398 aa18.21■□□□□ 0.51
CAPN1-226ENST00000533820 P2RY14Q15391 338 aa18.21■□□□□ 0.51
CAPN1-226ENST00000533820 GPAT3Q53EU6 434 aa18.21■□□□□ 0.51
CAPN1-226ENST00000533820 DDI2Q5TDH0 399 aa18.21■□□□□ 0.51
CAPN1-226ENST00000533820 PLPP4Q5VZY2 271 aa18.21■□□□□ 0.51
CAPN1-226ENST00000533820 ARMC5Q96C12 935 aa18.21■□□□□ 0.51
CAPN1-226ENST00000533820 ZG16BQ96DA0 208 aa18.21■□□□□ 0.51
CAPN1-226ENST00000533820 SLC35G5Q96KT7 338 aa18.21■□□□□ 0.51
CAPN1-226ENST00000533820 KATNB1Q9BVA0 655 aa18.21■□□□□ 0.51
CAPN1-226ENST00000533820 LHX9Q9NQ69 397 aa18.21■□□□□ 0.51
CAPN1-226ENST00000533820 GRIP1Q9Y3R0 1128 aa18.21■□□□□ 0.51
CAPN1-226ENST00000533820 SCN3AQ9NY46 2000 aa18.21■□□□□ 0.51
CAPN1-226ENST00000533820 PLXNA2O75051 1894 aa18.21■□□□□ 0.51
CAPN1-226ENST00000533820 B4DXG7 233 aa18.21■□□□□ 0.51
CAPN1-226ENST00000533820 LCMT2O60294 686 aaKnown RBP18.21■□□□□ 0.51
CAPN1-226ENST00000533820 NR2F6P10588 404 aa18.21■□□□□ 0.51
CAPN1-226ENST00000533820 ACADLP28330 430 aa18.21■□□□□ 0.51
CAPN1-226ENST00000533820 ZNF658BQ4V348 819 aaPredicted RBP18.21■□□□□ 0.51
CAPN1-226ENST00000533820 KIAA1161Q6NSJ0 714 aa18.21■□□□□ 0.51
CAPN1-226ENST00000533820 IKBIPQ70UQ0 350 aa18.21■□□□□ 0.51
CAPN1-226ENST00000533820 NXPE3Q969Y0 559 aa18.21■□□□□ 0.51
CAPN1-226ENST00000533820 ARRDC3Q96B67 414 aa18.21■□□□□ 0.51
CAPN1-226ENST00000533820 C16orf58Q96GQ5 468 aa18.21■□□□□ 0.51
CAPN1-226ENST00000533820 GFM1Q96RP9 751 aaKnown RBP18.21■□□□□ 0.51
CAPN1-226ENST00000533820 ZCCHC2Q9C0B9 1178 aaKnown RBP18.21■□□□□ 0.51
CAPN1-226ENST00000533820 ICKQ9UPZ9 632 aa18.21■□□□□ 0.51
CAPN1-226ENST00000533820 NTNG1Q9Y2I2 539 aa18.21■□□□□ 0.51
CAPN1-226ENST00000533820 KCNE3Q9Y6H6 103 aa18.21■□□□□ 0.51
CAPN1-226ENST00000533820 LILRB3O75022 631 aa18.2■□□□□ 0.5
CAPN1-226ENST00000533820 PDE9AO76083 593 aa18.2■□□□□ 0.5
CAPN1-226ENST00000533820 PDGFAP04085 211 aa18.2■□□□□ 0.5
CAPN1-226ENST00000533820 NCBP2P52298 156 aaKnown RBP eCLIP18.2■□□□□ 0.52e-8■□□□□ 10.4
CAPN1-226ENST00000533820 FABP5Q01469 135 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms