RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 EMC8O43402 210 aa11.04□□□□□ -0.64
SSBP3-214ENST00000533209 RASAL1O95294 804 aa11.04□□□□□ -0.64
SSBP3-214ENST00000533209 CCL3P10147 92 aa11.04□□□□□ -0.64
SSBP3-214ENST00000533209 PLA2G2AP14555 144 aa11.04□□□□□ -0.64
SSBP3-214ENST00000533209 S100A3P33764 101 aa11.04□□□□□ -0.64
SSBP3-214ENST00000533209 MAP3K8P41279 467 aa11.04□□□□□ -0.64
SSBP3-214ENST00000533209 MRPL19P49406 292 aaKnown RBP11.04□□□□□ -0.64
SSBP3-214ENST00000533209 DGKQP52824 942 aa11.04□□□□□ -0.64
SSBP3-214ENST00000533209 FBXW4P57775 412 aa11.04□□□□□ -0.64
SSBP3-214ENST00000533209 HBA1P69905 142 aa11.04□□□□□ -0.64
SSBP3-214ENST00000533209 PSG6Q00889 435 aa11.04□□□□□ -0.64
SSBP3-214ENST00000533209 PMP22Q01453 160 aa11.04□□□□□ -0.64
SSBP3-214ENST00000533209 NTRK2Q16620 822 aa11.04□□□□□ -0.64
SSBP3-214ENST00000533209 CGB2Q6NT52 195 aa11.04□□□□□ -0.64
SSBP3-214ENST00000533209 WDR53Q7Z5U6 358 aaPredicted RBP11.04□□□□□ -0.64
SSBP3-214ENST00000533209 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.04□□□□□ -0.64
SSBP3-214ENST00000533209 SLC44A2Q8IWA5 706 aaPredicted RBP11.04□□□□□ -0.64
SSBP3-214ENST00000533209 DND1Q8IYX4 353 aaKnown RBP11.04□□□□□ -0.64
SSBP3-214ENST00000533209 PRR22Q8IZ63 422 aa11.04□□□□□ -0.64
SSBP3-214ENST00000533209 CLECL1Q8IZS7 167 aa11.04□□□□□ -0.64
SSBP3-214ENST00000533209 SLC34A3Q8N130 599 aa11.04□□□□□ -0.64
SSBP3-214ENST00000533209 FAM13CQ8NE31 585 aa11.04□□□□□ -0.64
SSBP3-214ENST00000533209 NUP43Q8NFH3 380 aa11.04□□□□□ -0.64
SSBP3-214ENST00000533209 OR10G3Q8NGC4 313 aa11.04□□□□□ -0.64
SSBP3-214ENST00000533209 GRHL3Q8TE85 626 aa11.04□□□□□ -0.64
SSBP3-214ENST00000533209 PAQR8Q8TEZ7 354 aa11.04□□□□□ -0.64
SSBP3-214ENST00000533209 MIB2Q96AX9 1013 aa11.04□□□□□ -0.64
SSBP3-214ENST00000533209 FAM120BQ96EK7 910 aaKnown RBP11.04□□□□□ -0.64
SSBP3-214ENST00000533209 GIMAP5Q96F15 307 aa11.04□□□□□ -0.64
SSBP3-214ENST00000533209 C3orf14Q9HBI5 128 aa11.04□□□□□ -0.64
SSBP3-214ENST00000533209 FGFR1OP2Q9NVK5 253 aa11.04□□□□□ -0.64
SSBP3-214ENST00000533209 ZIM2Q9NZV7 527 aa11.04□□□□□ -0.64
SSBP3-214ENST00000533209 CHCHD2Q9Y6H1 151 aaPredicted RBP11.04□□□□□ -0.64
SSBP3-214ENST00000533209 NBASA2RRP1 2371 aa11.04□□□□□ -0.64
SSBP3-214ENST00000533209 SPENQ96T58 3664 aaKnown RBP11.03□□□□□ -0.64
SSBP3-214ENST00000533209 A0A0G2JMM0 328 aa11.03□□□□□ -0.64
SSBP3-214ENST00000533209 PRSS51A0A1B0GVH4 220 aa11.03□□□□□ -0.64
SSBP3-214ENST00000533209 A0A1W2PPB8 328 aa11.03□□□□□ -0.64
SSBP3-214ENST00000533209 A0A1W2PRS3 328 aa11.03□□□□□ -0.64
SSBP3-214ENST00000533209 ASPDHA6ND91 283 aa11.03□□□□□ -0.64
SSBP3-214ENST00000533209 KIR3DP1A8MWS1 328 aa11.03□□□□□ -0.64
SSBP3-214ENST00000533209 CAPN14A8MX76 684 aa11.03□□□□□ -0.64
SSBP3-214ENST00000533209 CFLARO15519 480 aa11.03□□□□□ -0.64
SSBP3-214ENST00000533209 PEX1O43933 1283 aa11.03□□□□□ -0.64
SSBP3-214ENST00000533209 PPM1BO75688 479 aa11.03□□□□□ -0.64
SSBP3-214ENST00000533209 SLC22A3O75751 556 aa11.03□□□□□ -0.64
SSBP3-214ENST00000533209 ABCB1P08183 1280 aaPredicted RBP11.03□□□□□ -0.64
SSBP3-214ENST00000533209 VIMP08670 466 aaKnown RBP11.03□□□□□ -0.64
SSBP3-214ENST00000533209 NAGAP17050 411 aa11.03□□□□□ -0.64
SSBP3-214ENST00000533209 CCT3P49368 545 aaKnown RBP11.03□□□□□ -0.64
SSBP3-214ENST00000533209 TMED10P49755 219 aaKnown RBP11.03□□□□□ -0.64
SSBP3-214ENST00000533209 PRKAG1P54619 331 aa11.03□□□□□ -0.64
SSBP3-214ENST00000533209 GPR85P60893 370 aa11.03□□□□□ -0.64
SSBP3-214ENST00000533209 FOXK1P85037 733 aa11.03□□□□□ -0.64
SSBP3-214ENST00000533209 PLCXD2Q0VAA5 305 aa11.03□□□□□ -0.64
SSBP3-214ENST00000533209 IGFBP7Q16270 282 aa11.03□□□□□ -0.64
SSBP3-214ENST00000533209 EXOSC6Q5RKV6 272 aaKnown RBP11.03□□□□□ -0.64
SSBP3-214ENST00000533209 ANXA8L1Q5VT79 327 aa11.03□□□□□ -0.64
SSBP3-214ENST00000533209 ZNF324BQ6AW86 544 aaPredicted RBP11.03□□□□□ -0.64
SSBP3-214ENST00000533209 DESI1Q6ICB0 168 aa11.03□□□□□ -0.64
SSBP3-214ENST00000533209 PAOXQ6QHF9 649 aa11.03□□□□□ -0.64
SSBP3-214ENST00000533209 SULF2Q8IWU5 870 aa11.03□□□□□ -0.64
SSBP3-214ENST00000533209 GLB1L3Q8NCI6 653 aaPredicted RBP11.03□□□□□ -0.64
SSBP3-214ENST00000533209 OR4N2Q8NGD1 307 aa11.03□□□□□ -0.64
SSBP3-214ENST00000533209 OR5M3Q8NGP4 307 aa11.03□□□□□ -0.64
SSBP3-214ENST00000533209 OR9I1Q8NGQ6 314 aa11.03□□□□□ -0.64
SSBP3-214ENST00000533209 DNAJB8Q8NHS0 232 aa11.03□□□□□ -0.64
SSBP3-214ENST00000533209 SFXN5Q8TD22 340 aa11.03□□□□□ -0.64
SSBP3-214ENST00000533209 HOXB13Q92826 284 aaPredicted RBP11.03□□□□□ -0.64
SSBP3-214ENST00000533209 TMBIM1Q969X1 311 aa11.03□□□□□ -0.64
SSBP3-214ENST00000533209 OMA1Q96E52 524 aa11.03□□□□□ -0.64
SSBP3-214ENST00000533209 FRMD6Q96NE9 622 aa11.03□□□□□ -0.64
SSBP3-214ENST00000533209 MS4A4EQ96PG1 132 aa11.03□□□□□ -0.64
SSBP3-214ENST00000533209 ZNF317Q96PQ6 595 aaPredicted RBP11.03□□□□□ -0.64
SSBP3-214ENST00000533209 ZBTB18Q99592 522 aa11.03□□□□□ -0.64
SSBP3-214ENST00000533209 SIKE1Q9BRV8 207 aa11.03□□□□□ -0.64
SSBP3-214ENST00000533209 LMF2Q9BU23 707 aaKnown RBP11.03□□□□□ -0.64
SSBP3-214ENST00000533209 PROK2Q9HC23 129 aa11.03□□□□□ -0.64
SSBP3-214ENST00000533209 NEUROD4Q9HD90 331 aa11.03□□□□□ -0.64
SSBP3-214ENST00000533209 EQTNQ9NQ60 294 aa11.03□□□□□ -0.64
SSBP3-214ENST00000533209 ZCCHC3Q9NUD5 404 aaKnown RBP11.03□□□□□ -0.64
SSBP3-214ENST00000533209 FAM120CQ9NX05 1096 aaKnown RBP11.03□□□□□ -0.64
SSBP3-214ENST00000533209 CNOT11Q9UKZ1 510 aaKnown RBP11.03□□□□□ -0.64
SSBP3-214ENST00000533209 SNX8Q9Y5X2 465 aa11.03□□□□□ -0.64
SSBP3-214ENST00000533209 A0A0G2JND7 137 aa11.02□□□□□ -0.65
SSBP3-214ENST00000533209 PINLYPA6NC86 204 aa11.02□□□□□ -0.65
SSBP3-214ENST00000533209 TTC36A6NLP5 189 aa11.02□□□□□ -0.65
SSBP3-214ENST00000533209 G3V3Y1 287 aa11.02□□□□□ -0.65
SSBP3-214ENST00000533209 KLRC4-KLRK1H3BQV0 150 aa11.02□□□□□ -0.65
SSBP3-214ENST00000533209 TP53I11O14683 189 aa11.02□□□□□ -0.65
SSBP3-214ENST00000533209 TSPAN2O60636 221 aa11.02□□□□□ -0.65
SSBP3-214ENST00000533209 NKX2-2O95096 273 aa11.02□□□□□ -0.65
SSBP3-214ENST00000533209 CPSF4O95639 269 aaKnown RBP11.02□□□□□ -0.65
SSBP3-214ENST00000533209 P04436 131 aa11.02□□□□□ -0.65
SSBP3-214ENST00000533209 PGRP06401 933 aa11.02□□□□□ -0.65
SSBP3-214ENST00000533209 ACP2P11117 423 aa11.02□□□□□ -0.65
SSBP3-214ENST00000533209 CNR1P21554 472 aa11.02□□□□□ -0.65
SSBP3-214ENST00000533209 PIGAP37287 484 aa11.02□□□□□ -0.65
SSBP3-214ENST00000533209 MEOX1P50221 254 aa11.02□□□□□ -0.65
SSBP3-214ENST00000533209 PSPHP78330 225 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms