RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 SLC1A3P43003 542 aa8.89□□□□□ -0.99
BDNF-216ENST00000532997 CLDN20P56880 219 aa8.89□□□□□ -0.99
BDNF-216ENST00000532997 TRA2BP62995 288 aaKnown RBP8.89□□□□□ -0.99
BDNF-216ENST00000532997 TSPAN31Q12999 210 aa8.89□□□□□ -0.99
BDNF-216ENST00000532997 TCTN3Q6NUS6 607 aa8.89□□□□□ -0.99
BDNF-216ENST00000532997 ZNF782Q6ZMW2 699 aaPredicted RBP8.89□□□□□ -0.99
BDNF-216ENST00000532997 MEIOBQ8N635 442 aa8.89□□□□□ -0.99
BDNF-216ENST00000532997 TM9SF4Q92544 642 aa8.89□□□□□ -0.99
BDNF-216ENST00000532997 FERD3LQ96RJ6 166 aa8.89□□□□□ -0.99
BDNF-216ENST00000532997 C7orf50Q9BRJ6 194 aaKnown RBP8.89□□□□□ -0.99
BDNF-216ENST00000532997 LRRN3Q9H3W5 708 aa8.89□□□□□ -0.99
BDNF-216ENST00000532997 DPEP2Q9H4A9 486 aa8.89□□□□□ -0.99
BDNF-216ENST00000532997 PLSCR3Q9NRY6 295 aa8.89□□□□□ -0.99
BDNF-216ENST00000532997 ICKQ9UPZ9 632 aa8.89□□□□□ -0.99
BDNF-216ENST00000532997 MAB21L2Q9Y586 359 aa8.89□□□□□ -0.99
BDNF-216ENST00000532997 TRAV6A0A075B6T7 132 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 LOC102723532A0A0G2JNH3 316 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 A0A1W2PQ45 241 aaPredicted RBP8.88□□□□□ -0.99
BDNF-216ENST00000532997 A0A1W2PQY0 241 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 CPSF4LA6NMK7 179 aaKnown RBP8.88□□□□□ -0.99
BDNF-216ENST00000532997 GABRPO00591 440 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 EEF1E1O43324 174 aaKnown RBP8.88□□□□□ -0.99
BDNF-216ENST00000532997 VEGFDO43915 354 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 ICMTO60725 284 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 NPPBP16860 134 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 ZNF10P21506 573 aaPredicted RBP8.88□□□□□ -0.99
BDNF-216ENST00000532997 ALAS2P22557 587 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 DNASE1P24855 282 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 UQCRC1P31930 480 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 ETV5P41161 510 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 KIR2DL3P43628 341 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 RFX2P48378 723 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 PITPNBP48739 271 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 ETV1P50549 477 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 CCL23P55773 120 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 SP3Q02447 781 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 HYAL2Q12891 473 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 NDUFAF6Q330K2 333 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 KIF18BQ86Y91 864 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 OR51G2Q8NGK0 314 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.88□□□□□ -0.99
BDNF-216ENST00000532997 SLC7A13Q8TCU3 470 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 ZFP3Q96NJ6 502 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 HHIPQ96QV1 700 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 OR2M2Q96R28 347 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 SMAD5Q99717 465 aaKnown RBP8.88□□□□□ -0.99
BDNF-216ENST00000532997 YIPF4Q9BSR8 244 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 TMEM43Q9BTV4 400 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 RRAGCQ9HB90 399 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 ACOXLQ9NUZ1 547 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 KCND3Q9UK17 655 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 FBXW2Q9UKT8 454 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 MGAT4AQ9UM21 535 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 CACNG2Q9Y698 323 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 GBF1Q92538 1859 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 RTCAO00442 366 aaKnown RBP8.88□□□□□ -0.99
BDNF-216ENST00000532997 C8AP07357 584 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 ALPPL2P10696 532 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 LAMP2P13473 410 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 TYRP14679 529 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 NDUFV2P19404 249 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 P2RX3P56373 397 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 CDKN3Q16667 212 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 ZNF791Q3KP31 576 aaPredicted RBP8.88□□□□□ -0.99
BDNF-216ENST00000532997 HSD17B12Q53GQ0 312 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 RPL13AP3Q6NVV1 102 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 Q6ZNB5 142 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 RASSF6Q6ZTQ3 369 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 TIGD4Q8IY51 512 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 OR52N1Q8NH53 320 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 GANCQ8TET4 914 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 IRF7Q92985 503 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 MCHR1Q99705 422 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 SLC28A3Q9HAS3 691 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 NKIRAS2Q9NYR9 191 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 PFDN2Q9UHV9 154 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 ADAM29Q9UKF5 820 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 GPR52Q9Y2T5 361 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 CDH10Q9Y6N8 788 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 B8ZZF3 427 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 YY2O15391 372 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 KHDRBS3O75525 346 aaKnown RBP8.88□□□□□ -0.99
BDNF-216ENST00000532997 RBMS1P29558 406 aaKnown RBP8.88□□□□□ -0.99
BDNF-216ENST00000532997 PDHA2P29803 388 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 FGF9P31371 208 aaPredicted RBP8.88□□□□□ -0.99
BDNF-216ENST00000532997 FAUP35544 74 aaKnown RBP8.88□□□□□ -0.99
BDNF-216ENST00000532997 ZNF81P51508 661 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 TAS2R38P59533 333 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 CCSMST1Q4G0I0 132 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 TMEM35AQ53FP2 167 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 BCL2L15Q5TBC7 163 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 TMEM145Q8NBT3 493 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 RPLP0P6Q8NHW5 317 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 SFXN5Q8TD22 340 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 SLC22A12Q96S37 553 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 CD180Q99467 661 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 THAP7Q9BT49 309 aaPredicted RBP8.88□□□□□ -0.99
BDNF-216ENST00000532997 KCNK12Q9HB15 430 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 SLC35C2Q9NQQ7 365 aa8.88□□□□□ -0.99
BDNF-216ENST00000532997 TAAR2Q9P1P5 351 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms