RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 MCM8Q9UJA3 840 aa17.36■□□□□ 0.37
SSH3-209ENST00000532600 PTGDR2Q9Y5Y4 395 aa17.36■□□□□ 0.37
SSH3-209ENST00000532600 FAM90A27PA6NNH2 459 aa17.35■□□□□ 0.37
SSH3-209ENST00000532600 GUCY1B2O75343 617 aa17.35■□□□□ 0.37
SSH3-209ENST00000532600 ULK1O75385 1050 aa17.35■□□□□ 0.37
SSH3-209ENST00000532600 NME6O75414 186 aaPredicted RBP17.35■□□□□ 0.37
SSH3-209ENST00000532600 KRT6AP02538 564 aa17.35■□□□□ 0.37
SSH3-209ENST00000532600 KRT6BP04259 564 aa17.35■□□□□ 0.37
SSH3-209ENST00000532600 ABCB1P08183 1280 aaPredicted RBP17.35■□□□□ 0.37
SSH3-209ENST00000532600 CSNK2A2P19784 350 aaPredicted RBP17.35■□□□□ 0.37
SSH3-209ENST00000532600 ABCD3P28288 659 aa17.35■□□□□ 0.37
SSH3-209ENST00000532600 HMOX2P30519 316 aa17.35■□□□□ 0.37
SSH3-209ENST00000532600 CASP3P42574 277 aa17.35■□□□□ 0.37
SSH3-209ENST00000532600 KRT6CP48668 564 aa17.35■□□□□ 0.37
SSH3-209ENST00000532600 MRPS35P82673 323 aaKnown RBP17.35■□□□□ 0.37
SSH3-209ENST00000532600 PRSS53Q2L4Q9 553 aa17.35■□□□□ 0.37
SSH3-209ENST00000532600 UGT3A2Q3SY77 523 aa17.35■□□□□ 0.37
SSH3-209ENST00000532600 KANK2Q63ZY3 851 aa17.35■□□□□ 0.37
SSH3-209ENST00000532600 SEM1Q6ZVN7 128 aa17.35■□□□□ 0.37
SSH3-209ENST00000532600 LIX1LQ8IVB5 337 aa17.35■□□□□ 0.37
SSH3-209ENST00000532600 JSRP1Q96MG2 331 aaPredicted RBP17.35■□□□□ 0.37
SSH3-209ENST00000532600 RILPQ96NA2 401 aa17.35■□□□□ 0.37
SSH3-209ENST00000532600 SORT1Q99523 831 aa17.35■□□□□ 0.37
SSH3-209ENST00000532600 LDAHQ9H6V9 325 aa17.35■□□□□ 0.37
SSH3-209ENST00000532600 ANKRA2Q9H9E1 313 aa17.35■□□□□ 0.37
SSH3-209ENST00000532600 QPCTLQ9NXS2 382 aa17.35■□□□□ 0.37
SSH3-209ENST00000532600 ZDHHC2Q9UIJ5 367 aa17.35■□□□□ 0.37
SSH3-209ENST00000532600 ACAD8Q9UKU7 415 aa17.35■□□□□ 0.37
SSH3-209ENST00000532600 DLGAP4Q9Y2H0 992 aa17.35■□□□□ 0.37
SSH3-209ENST00000532600 A0A0G2JNJ9 132 aa17.34■□□□□ 0.37
SSH3-209ENST00000532600 ENO4A6NNW6 628 aa17.34■□□□□ 0.37
SSH3-209ENST00000532600 KDM4EB2RXH2 506 aaPredicted RBP17.34■□□□□ 0.37
SSH3-209ENST00000532600 H3BQF6 201 aa17.34■□□□□ 0.37
SSH3-209ENST00000532600 PCDH7O60245 1069 aa17.34■□□□□ 0.37
SSH3-209ENST00000532600 IL3P08700 152 aa17.34■□□□□ 0.37
SSH3-209ENST00000532600 PCSK2P16519 638 aa17.34■□□□□ 0.37
SSH3-209ENST00000532600 SERPINB5P36952 375 aa17.34■□□□□ 0.37
SSH3-209ENST00000532600 TRPC1P48995 793 aa17.34■□□□□ 0.37
SSH3-209ENST00000532600 ALDH9A1P49189 494 aa17.34■□□□□ 0.37
SSH3-209ENST00000532600 EMDP50402 254 aa17.34■□□□□ 0.37
SSH3-209ENST00000532600 ABCE1P61221 599 aaKnown RBP17.34■□□□□ 0.37
SSH3-209ENST00000532600 BST1Q10588 318 aa17.34■□□□□ 0.37
SSH3-209ENST00000532600 ZNF628Q5EBL2 1059 aa17.34■□□□□ 0.37
SSH3-209ENST00000532600 HLA-DQA1Q5Y7H0 255 aa17.34■□□□□ 0.37
SSH3-209ENST00000532600 B3GNT6Q6ZMB0 384 aa17.34■□□□□ 0.37
SSH3-209ENST00000532600 MEX3BQ6ZN04 569 aaKnown RBP17.34■□□□□ 0.37
SSH3-209ENST00000532600 ACAD11Q709F0 780 aa17.34■□□□□ 0.37
SSH3-209ENST00000532600 OR52R1Q8NGF1 315 aa17.34■□□□□ 0.37
SSH3-209ENST00000532600 NEIL3Q8TAT5 605 aa17.34■□□□□ 0.37
SSH3-209ENST00000532600 HGDQ93099 445 aa17.34■□□□□ 0.37
SSH3-209ENST00000532600 SARAFQ96BY9 339 aa17.34■□□□□ 0.37
SSH3-209ENST00000532600 ACBD3Q9H3P7 528 aa17.34■□□□□ 0.37
SSH3-209ENST00000532600 TUBB1Q9H4B7 451 aa17.34■□□□□ 0.37
SSH3-209ENST00000532600 NMRK1Q9NWW6 199 aa17.34■□□□□ 0.37
SSH3-209ENST00000532600 Q9UFV3 132 aa17.34■□□□□ 0.37
SSH3-209ENST00000532600 UTS2RQ9UKP6 389 aa17.34■□□□□ 0.37
SSH3-209ENST00000532600 ARHGAP21Q5T5U3 1957 aa17.33■□□□□ 0.37
SSH3-209ENST00000532600 AKAP9Q99996 3911 aa17.33■□□□□ 0.37
SSH3-209ENST00000532600 SERTM1A2A2V5 107 aa17.33■□□□□ 0.36
SSH3-209ENST00000532600 FIGNL2A6NMB9 653 aa17.33■□□□□ 0.36
SSH3-209ENST00000532600 TMEM114B3SHH9 223 aa17.33■□□□□ 0.36
SSH3-209ENST00000532600 TP53I11O14683 189 aa17.33■□□□□ 0.36
SSH3-209ENST00000532600 AZIN1O14977 448 aa17.33■□□□□ 0.36
SSH3-209ENST00000532600 FGF4P08620 206 aa17.33■□□□□ 0.36
SSH3-209ENST00000532600 UROSP10746 265 aa17.33■□□□□ 0.36
SSH3-209ENST00000532600 MSX1P28360 303 aa17.33■□□□□ 0.36
SSH3-209ENST00000532600 PTGDSP41222 190 aa17.33■□□□□ 0.36
SSH3-209ENST00000532600 PPP2R2AP63151 447 aa17.33■□□□□ 0.36
SSH3-209ENST00000532600 TBCELQ5QJ74 424 aa17.33■□□□□ 0.36
SSH3-209ENST00000532600 SH2D4BQ5SQS7 431 aa17.33■□□□□ 0.36
SSH3-209ENST00000532600 C1orf185Q5T7R7 199 aa17.33■□□□□ 0.36
SSH3-209ENST00000532600 GBP7Q8N8V2 638 aaPredicted RBP17.33■□□□□ 0.36
SSH3-209ENST00000532600 PPP1R14CQ8TAE6 165 aa17.33■□□□□ 0.36
SSH3-209ENST00000532600 AGR3Q8TD06 166 aa17.33■□□□□ 0.36
SSH3-209ENST00000532600 C16orf78Q8WTQ4 265 aa17.33■□□□□ 0.36
SSH3-209ENST00000532600 ZNF597Q96LX8 424 aa17.33■□□□□ 0.36
SSH3-209ENST00000532600 GNRHR2Q96P88 292 aa17.33■□□□□ 0.36
SSH3-209ENST00000532600 NODALQ96S42 347 aa17.33■□□□□ 0.36
SSH3-209ENST00000532600 SECISBP2Q96T21 854 aaKnown RBP17.33■□□□□ 0.36
SSH3-209ENST00000532600 FAIM2Q9BWQ8 316 aa17.33■□□□□ 0.36
SSH3-209ENST00000532600 BCAP29Q9UHQ4 241 aa17.33■□□□□ 0.36
SSH3-209ENST00000532600 FIS1Q9Y3D6 152 aa17.33■□□□□ 0.36
SSH3-209ENST00000532600 TRAF6Q9Y4K3 522 aa17.33■□□□□ 0.36
SSH3-209ENST00000532600 CCL27Q9Y4X3 112 aa17.33■□□□□ 0.36
SSH3-209ENST00000532600 INTS1Q8N201 2190 aaKnown RBP17.33■□□□□ 0.36
SSH3-209ENST00000532600 KIAA1549Q9HCM3 1950 aa17.32■□□□□ 0.36
SSH3-209ENST00000532600 CAPN14A8MX76 684 aa17.32■□□□□ 0.36
SSH3-209ENST00000532600 ATP8B1O43520 1251 aa17.32■□□□□ 0.36
SSH3-209ENST00000532600 WDR1O75083 606 aa17.32■□□□□ 0.36
SSH3-209ENST00000532600 SNNO75324 88 aaPredicted RBP17.32■□□□□ 0.36
SSH3-209ENST00000532600 PPM1BO75688 479 aa17.32■□□□□ 0.36
SSH3-209ENST00000532600 HPNP05981 417 aa17.32■□□□□ 0.36
SSH3-209ENST00000532600 GDF1P27539 372 aa17.32■□□□□ 0.36
SSH3-209ENST00000532600 SLC1A6P48664 564 aa17.32■□□□□ 0.36
SSH3-209ENST00000532600 CDK9P50750 372 aaKnown RBP17.32■□□□□ 0.36
SSH3-209ENST00000532600 CRYZQ08257 329 aaKnown RBP17.32■□□□□ 0.36
SSH3-209ENST00000532600 STX3Q13277 289 aa17.32■□□□□ 0.36
SSH3-209ENST00000532600 WLSQ5T9L3 541 aa17.32■□□□□ 0.36
SSH3-209ENST00000532600 TMEM198Q66K66 360 aa17.32■□□□□ 0.36
SSH3-209ENST00000532600 GALNT18Q6P9A2 607 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms