RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 ZNF500O60304 480 aaPredicted RBP15.78■□□□□ 0.12
PHRF1-204ENST00000532550 PLOD3O60568 738 aa15.78■□□□□ 0.12
PHRF1-204ENST00000532550 WDR1O75083 606 aa15.78■□□□□ 0.12
PHRF1-204ENST00000532550 REM1O75628 298 aa15.78■□□□□ 0.12
PHRF1-204ENST00000532550 HOXD4P09016 255 aaPredicted RBP15.78■□□□□ 0.12
PHRF1-204ENST00000532550 ALDH3A1P30838 453 aa15.78■□□□□ 0.12
PHRF1-204ENST00000532550 CHRNB4P30926 498 aa15.78■□□□□ 0.12
PHRF1-204ENST00000532550 TRPC1P48995 793 aa15.78■□□□□ 0.12
PHRF1-204ENST00000532550 NCBP2P52298 156 aaKnown RBP eCLIP15.78■□□□□ 0.12
PHRF1-204ENST00000532550 NUP107P57740 925 aa15.78■□□□□ 0.12
PHRF1-204ENST00000532550 TOMM20Q15388 145 aa15.78■□□□□ 0.12
PHRF1-204ENST00000532550 SLC30A6Q6NXT4 461 aa15.78■□□□□ 0.12
PHRF1-204ENST00000532550 B3GNT6Q6ZMB0 384 aa15.78■□□□□ 0.12
PHRF1-204ENST00000532550 RPRMLQ8N4K4 120 aa15.78■□□□□ 0.12
PHRF1-204ENST00000532550 LILRB4Q8NHJ6 448 aa15.78■□□□□ 0.12
PHRF1-204ENST00000532550 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.78■□□□□ 0.12
PHRF1-204ENST00000532550 TCP10LQ8TDR4 215 aa15.78■□□□□ 0.12
PHRF1-204ENST00000532550 CAVIN3Q969G5 261 aa15.78■□□□□ 0.12
PHRF1-204ENST00000532550 TMCO6Q96DC7 493 aa15.78■□□□□ 0.12
PHRF1-204ENST00000532550 TMEM41AQ96HV5 264 aa15.78■□□□□ 0.12
PHRF1-204ENST00000532550 SLC6A15Q9H2J7 730 aa15.78■□□□□ 0.12
PHRF1-204ENST00000532550 LRTM1Q9HBL6 345 aa15.78■□□□□ 0.12
PHRF1-204ENST00000532550 EML4Q9HC35 981 aaKnown RBP15.78■□□□□ 0.12
PHRF1-204ENST00000532550 C1orf109Q9NX04 203 aa15.78■□□□□ 0.12
PHRF1-204ENST00000532550 SPRR3Q9UBC9 169 aa15.78■□□□□ 0.12
PHRF1-204ENST00000532550 CCL27Q9Y4X3 112 aa15.78■□□□□ 0.12
PHRF1-204ENST00000532550 EXPH5Q8NEV8 1989 aa15.78■□□□□ 0.12
PHRF1-204ENST00000532550 C19orf84I3L1E1 186 aa15.77■□□□□ 0.12
PHRF1-204ENST00000532550 GNB5O14775 395 aa15.77■□□□□ 0.12
PHRF1-204ENST00000532550 NPHS1O60500 1241 aa15.77■□□□□ 0.12
PHRF1-204ENST00000532550 ERN1O75460 977 aaKnown RBP15.77■□□□□ 0.12
PHRF1-204ENST00000532550 JUNP05412 331 aaKnown RBP15.77■□□□□ 0.12
PHRF1-204ENST00000532550 PRF1P14222 555 aa15.77■□□□□ 0.12
PHRF1-204ENST00000532550 GABRA1P14867 456 aa15.77■□□□□ 0.12
PHRF1-204ENST00000532550 PRPH2P23942 346 aa15.77■□□□□ 0.12
PHRF1-204ENST00000532550 ELAVL4P26378 380 aaKnown RBP15.77■□□□□ 0.12
PHRF1-204ENST00000532550 PTGER4P35408 488 aa15.77■□□□□ 0.12
PHRF1-204ENST00000532550 KRT20P35900 424 aa15.77■□□□□ 0.12
PHRF1-204ENST00000532550 PSPHP78330 225 aa15.77■□□□□ 0.12
PHRF1-204ENST00000532550 SNTA1Q13424 505 aa15.77■□□□□ 0.12
PHRF1-204ENST00000532550 KIAA0040Q15053 153 aa15.77■□□□□ 0.12
PHRF1-204ENST00000532550 TIGD3Q6B0B8 471 aa15.77■□□□□ 0.12
PHRF1-204ENST00000532550 DESI1Q6ICB0 168 aa15.77■□□□□ 0.12
PHRF1-204ENST00000532550 TMEM81Q6P7N7 255 aa15.77■□□□□ 0.12
PHRF1-204ENST00000532550 IKBIPQ70UQ0 350 aa15.77■□□□□ 0.12
PHRF1-204ENST00000532550 CLYBLQ8N0X4 340 aa15.77■□□□□ 0.12
PHRF1-204ENST00000532550 OR7G2Q8NG99 324 aa15.77■□□□□ 0.12
PHRF1-204ENST00000532550 OR1J4Q8NGS1 313 aa15.77■□□□□ 0.12
PHRF1-204ENST00000532550 HGDQ93099 445 aa15.77■□□□□ 0.12
PHRF1-204ENST00000532550 TMBIM1Q969X1 311 aa15.77■□□□□ 0.12
PHRF1-204ENST00000532550 COL21A1Q96P44 957 aa15.77■□□□□ 0.12
PHRF1-204ENST00000532550 NODALQ96S42 347 aa15.77■□□□□ 0.12
PHRF1-204ENST00000532550 TTYH2Q9BSA4 534 aa15.77■□□□□ 0.12
PHRF1-204ENST00000532550 FOLH1BQ9HBA9 442 aa15.77■□□□□ 0.12
PHRF1-204ENST00000532550 KCNJ16Q9NPI9 418 aa15.77■□□□□ 0.12
PHRF1-204ENST00000532550 KLRF1Q9NZS2 232 aa15.77■□□□□ 0.12
PHRF1-204ENST00000532550 SLC17A7Q9P2U7 560 aa15.77■□□□□ 0.12
PHRF1-204ENST00000532550 C15orf41Q9Y2V0 281 aa15.77■□□□□ 0.12
PHRF1-204ENST00000532550 PCDHGB3Q9Y5G1 929 aa15.77■□□□□ 0.12
PHRF1-204ENST00000532550 C15orf38-AP3S2A0A0A6YYH1 394 aa15.76■□□□□ 0.11
PHRF1-204ENST00000532550 OR6C70A6NIJ9 312 aa15.76■□□□□ 0.11
PHRF1-204ENST00000532550 NPIPB8E9PQR5 432 aa15.76■□□□□ 0.11
PHRF1-204ENST00000532550 ABCB7O75027 752 aa15.76■□□□□ 0.11
PHRF1-204ENST00000532550 ICOSLGO75144 302 aa15.76■□□□□ 0.11
PHRF1-204ENST00000532550 UGT2B11O75310 529 aa15.76■□□□□ 0.11
PHRF1-204ENST00000532550 NME6O75414 186 aaPredicted RBP15.76■□□□□ 0.11
PHRF1-204ENST00000532550 SLITRK5O94991 958 aa15.76■□□□□ 0.11
PHRF1-204ENST00000532550 HPNP05981 417 aa15.76■□□□□ 0.11
PHRF1-204ENST00000532550 FGF4P08620 206 aa15.76■□□□□ 0.11
PHRF1-204ENST00000532550 LINC00032P0C843 101 aa15.76■□□□□ 0.11
PHRF1-204ENST00000532550 CT45A8P0DMV1 189 aa15.76■□□□□ 0.11
PHRF1-204ENST00000532550 CT45A9P0DMV2 189 aa15.76■□□□□ 0.11
PHRF1-204ENST00000532550 GLI4P10075 376 aa15.76■□□□□ 0.11
PHRF1-204ENST00000532550 NEFHP12036 1026 aa15.76■□□□□ 0.11
PHRF1-204ENST00000532550 ENDOUP21128 410 aaKnown RBP15.76■□□□□ 0.11
PHRF1-204ENST00000532550 NTSP30990 170 aa15.76■□□□□ 0.11
PHRF1-204ENST00000532550 KIR3DL1P43629 444 aa15.76■□□□□ 0.11
PHRF1-204ENST00000532550 CDK9P50750 372 aaKnown RBP15.76■□□□□ 0.11
PHRF1-204ENST00000532550 PRSS53Q2L4Q9 553 aa15.76■□□□□ 0.11
PHRF1-204ENST00000532550 CT45A2Q5DJT8 189 aa15.76■□□□□ 0.11
PHRF1-204ENST00000532550 ARL13AQ5H913 290 aaPredicted RBP15.76■□□□□ 0.11
PHRF1-204ENST00000532550 C1orf185Q5T7R7 199 aa15.76■□□□□ 0.11
PHRF1-204ENST00000532550 FNDC7Q5VTL7 733 aa15.76■□□□□ 0.11
PHRF1-204ENST00000532550 ANGPTL8Q6UXH0 198 aa15.76■□□□□ 0.11
PHRF1-204ENST00000532550 Q6ZSR9 355 aa15.76■□□□□ 0.11
PHRF1-204ENST00000532550 CCDC71Q8IV32 467 aaPredicted RBP15.76■□□□□ 0.11
PHRF1-204ENST00000532550 EGLN2Q96KS0 407 aa15.76■□□□□ 0.11
PHRF1-204ENST00000532550 VSTM2LQ96N03 204 aa15.76■□□□□ 0.11
PHRF1-204ENST00000532550 BTBD9Q96Q07 612 aa15.76■□□□□ 0.11
PHRF1-204ENST00000532550 MECRQ9BV79 373 aa15.76■□□□□ 0.11
PHRF1-204ENST00000532550 OSBPL11Q9BXB4 747 aa15.76■□□□□ 0.11
PHRF1-204ENST00000532550 PARD6BQ9BYG5 372 aa15.76■□□□□ 0.11
PHRF1-204ENST00000532550 TRAF6Q9Y4K3 522 aa15.76■□□□□ 0.11
PHRF1-204ENST00000532550 DNAJC15Q9Y5T4 150 aa15.76■□□□□ 0.11
PHRF1-204ENST00000532550 PTGDR2Q9Y5Y4 395 aa15.76■□□□□ 0.11
PHRF1-204ENST00000532550 A0A087WV62 115 aa15.75■□□□□ 0.11
PHRF1-204ENST00000532550 C2orf72A6NCS6 295 aa15.75■□□□□ 0.11
PHRF1-204ENST00000532550 FAM47E-STBD1D6RA91 191 aa15.75■□□□□ 0.11
PHRF1-204ENST00000532550 COQ9O75208 318 aa15.75■□□□□ 0.11
PHRF1-204ENST00000532550 CORO7P57737 925 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms