RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 GSX2Q9BZM3 304 aa8.36□□□□□ -1.07
NEDD8-206ENST00000531430 OR2B2Q9GZK3 357 aa8.36□□□□□ -1.07
NEDD8-206ENST00000531430 CXorf56Q9H5V9 222 aa8.36□□□□□ -1.07
NEDD8-206ENST00000531430 DDX31Q9H8H2 851 aaKnown RBP8.36□□□□□ -1.07
NEDD8-206ENST00000531430 PFDN4Q9NQP4 134 aa8.36□□□□□ -1.07
NEDD8-206ENST00000531430 RYDENQ9NUL5 291 aaKnown RBP8.36□□□□□ -1.07
NEDD8-206ENST00000531430 ELOVL5Q9NYP7 299 aa8.36□□□□□ -1.07
NEDD8-206ENST00000531430 NUDT4Q9NZJ9 180 aa8.36□□□□□ -1.07
NEDD8-206ENST00000531430 CLCF1Q9UBD9 225 aa8.36□□□□□ -1.07
NEDD8-206ENST00000531430 FBXL2Q9UKC9 423 aa8.36□□□□□ -1.07
NEDD8-206ENST00000531430 PROCRQ9UNN8 238 aa8.36□□□□□ -1.07
NEDD8-206ENST00000531430 LAMP3Q9UQV4 416 aa8.36□□□□□ -1.07
NEDD8-206ENST00000531430 CFL2Q9Y281 166 aa8.36□□□□□ -1.07
NEDD8-206ENST00000531430 DTX4Q9Y2E6 619 aa8.36□□□□□ -1.07
NEDD8-206ENST00000531430 PPP2R2CQ9Y2T4 447 aa8.36□□□□□ -1.07
NEDD8-206ENST00000531430 RNF11Q9Y3C5 154 aa8.36□□□□□ -1.07
NEDD8-206ENST00000531430 A0A087X1B8 175 aa8.35□□□□□ -1.07
NEDD8-206ENST00000531430 A0A0A6YYD5 115 aa8.35□□□□□ -1.07
NEDD8-206ENST00000531430 EFCAB8A8MWE9 144 aa8.35□□□□□ -1.07
NEDD8-206ENST00000531430 CXorf49A8MYA2 514 aaPredicted RBP8.35□□□□□ -1.07
NEDD8-206ENST00000531430 NME6O75414 186 aaPredicted RBP8.35□□□□□ -1.07
NEDD8-206ENST00000531430 PLAUP00749 431 aa8.35□□□□□ -1.07
NEDD8-206ENST00000531430 C8BP07358 591 aa8.35□□□□□ -1.07
NEDD8-206ENST00000531430 GFAPP14136 432 aa8.35□□□□□ -1.07
NEDD8-206ENST00000531430 IVDP26440 423 aa8.35□□□□□ -1.07
NEDD8-206ENST00000531430 DPP4P27487 766 aa8.35□□□□□ -1.07
NEDD8-206ENST00000531430 SRD5A2P31213 254 aa8.35□□□□□ -1.07
NEDD8-206ENST00000531430 PTGDSP41222 190 aa8.35□□□□□ -1.07
NEDD8-206ENST00000531430 ALDH9A1P49189 494 aa8.35□□□□□ -1.07
NEDD8-206ENST00000531430 GFRA1P56159 465 aa8.35□□□□□ -1.07
NEDD8-206ENST00000531430 RAB10P61026 200 aa8.35□□□□□ -1.07
NEDD8-206ENST00000531430 SNTA1Q13424 505 aa8.35□□□□□ -1.07
NEDD8-206ENST00000531430 SGCBQ16585 318 aa8.35□□□□□ -1.07
NEDD8-206ENST00000531430 PFKFB4Q16877 469 aa8.35□□□□□ -1.07
NEDD8-206ENST00000531430 CLEC12BQ2HXU8 276 aa8.35□□□□□ -1.07
NEDD8-206ENST00000531430 LIPJQ5W064 366 aa8.35□□□□□ -1.07
NEDD8-206ENST00000531430 MRM1Q6IN84 353 aaKnown RBP8.35□□□□□ -1.07
NEDD8-206ENST00000531430 ISCA2Q86U28 154 aa8.35□□□□□ -1.07
NEDD8-206ENST00000531430 SLC35F6Q8N357 371 aa8.35□□□□□ -1.07
NEDD8-206ENST00000531430 MEIOBQ8N635 442 aa8.35□□□□□ -1.07
NEDD8-206ENST00000531430 OR52R1Q8NGF1 315 aa8.35□□□□□ -1.07
NEDD8-206ENST00000531430 PYROXD1Q8WU10 500 aa8.35□□□□□ -1.07
NEDD8-206ENST00000531430 TMEM158Q8WZ71 300 aa8.35□□□□□ -1.07
NEDD8-206ENST00000531430 TMBIM1Q969X1 311 aa8.35□□□□□ -1.07
NEDD8-206ENST00000531430 GTPBP3Q969Y2 492 aaKnown RBP8.35□□□□□ -1.07
NEDD8-206ENST00000531430 NTNG2Q96CW9 530 aa8.35□□□□□ -1.07
NEDD8-206ENST00000531430 COL21A1Q96P44 957 aa8.35□□□□□ -1.07
NEDD8-206ENST00000531430 UCN2Q96RP3 112 aa8.35□□□□□ -1.07
NEDD8-206ENST00000531430 ADOQ96SZ5 270 aa8.35□□□□□ -1.07
NEDD8-206ENST00000531430 PINK1Q9BXM7 581 aa8.35□□□□□ -1.07
NEDD8-206ENST00000531430 IPPKQ9H8X2 491 aa8.35□□□□□ -1.07
NEDD8-206ENST00000531430 NMRAL1Q9HBL8 299 aa8.35□□□□□ -1.07
NEDD8-206ENST00000531430 HEY2Q9UBP5 337 aa8.35□□□□□ -1.07
NEDD8-206ENST00000531430 DLGAP4Q9Y2H0 992 aa8.35□□□□□ -1.07
NEDD8-206ENST00000531430 SNX24Q9Y343 169 aa8.35□□□□□ -1.07
NEDD8-206ENST00000531430 MXRA5Q9NR99 2828 aa8.35□□□□□ -1.07
NEDD8-206ENST00000531430 CHD3Q12873 2000 aaKnown RBP8.35□□□□□ -1.07
NEDD8-206ENST00000531430 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.34□□□□□ -1.07
NEDD8-206ENST00000531430 LRRC14BA6NHZ5 514 aa8.34□□□□□ -1.07
NEDD8-206ENST00000531430 H0YC42 278 aa8.34□□□□□ -1.07
NEDD8-206ENST00000531430 GMFGO60234 142 aa8.34□□□□□ -1.07
NEDD8-206ENST00000531430 ABCB7O75027 752 aa8.34□□□□□ -1.07
NEDD8-206ENST00000531430 ESRRBO95718 433 aa8.34□□□□□ -1.07
NEDD8-206ENST00000531430 CRHP06850 196 aa8.34□□□□□ -1.07
NEDD8-206ENST00000531430 RHOXF2BP0C7M4 288 aa8.34□□□□□ -1.07
NEDD8-206ENST00000531430 PEPDP12955 493 aa8.34□□□□□ -1.07
NEDD8-206ENST00000531430 ZNF708P17019 499 aa8.34□□□□□ -1.07
NEDD8-206ENST00000531430 HK1P19367 917 aa8.34□□□□□ -1.07
NEDD8-206ENST00000531430 SPRP35270 261 aaPredicted RBP8.34□□□□□ -1.07
NEDD8-206ENST00000531430 KIR2DL2P43627 348 aaPredicted RBP8.34□□□□□ -1.07
NEDD8-206ENST00000531430 TPD52P55327 224 aaPredicted RBP8.34□□□□□ -1.07
NEDD8-206ENST00000531430 CLDN18P56856 261 aa8.34□□□□□ -1.07
NEDD8-206ENST00000531430 EEFSECP57772 596 aaKnown RBP8.34□□□□□ -1.07
NEDD8-206ENST00000531430 HMGCS1Q01581 520 aa8.34□□□□□ -1.07
NEDD8-206ENST00000531430 DR1Q01658 176 aa8.34□□□□□ -1.07
NEDD8-206ENST00000531430 OCRLQ01968 901 aa8.34□□□□□ -1.07
NEDD8-206ENST00000531430 CUL3Q13618 768 aa8.34□□□□□ -1.07
NEDD8-206ENST00000531430 FRG1Q14331 258 aaKnown RBP8.34□□□□□ -1.07
NEDD8-206ENST00000531430 TRMT12Q53H54 448 aaKnown RBP8.34□□□□□ -1.07
NEDD8-206ENST00000531430 BEX5Q5H9J7 111 aa8.34□□□□□ -1.07
NEDD8-206ENST00000531430 RAET1LQ5VY80 246 aa8.34□□□□□ -1.07
NEDD8-206ENST00000531430 HEPHL1Q6MZM0 1159 aa8.34□□□□□ -1.07
NEDD8-206ENST00000531430 ZNF704Q6ZNC4 412 aaPredicted RBP8.34□□□□□ -1.07
NEDD8-206ENST00000531430 C22orf34Q6ZV56 151 aa8.34□□□□□ -1.07
NEDD8-206ENST00000531430 CMC1Q7Z7K0 106 aa8.34□□□□□ -1.07
NEDD8-206ENST00000531430 ADGRE4PQ86SQ3 457 aa8.34□□□□□ -1.07
NEDD8-206ENST00000531430 LRRC8AQ8IWT6 810 aa8.34□□□□□ -1.07
NEDD8-206ENST00000531430 PPM1NQ8N819 430 aa8.34□□□□□ -1.07
NEDD8-206ENST00000531430 CTHRC1Q96CG8 243 aa8.34□□□□□ -1.07
NEDD8-206ENST00000531430 NXNL1Q96CM4 212 aa8.34□□□□□ -1.07
NEDD8-206ENST00000531430 MRRFQ96E11 262 aaKnown RBP8.34□□□□□ -1.07
NEDD8-206ENST00000531430 DTNBP1Q96EV8 351 aa8.34□□□□□ -1.07
NEDD8-206ENST00000531430 TRMT61AQ96FX7 289 aaKnown RBP8.34□□□□□ -1.07
NEDD8-206ENST00000531430 PLPPR2Q96GM1 343 aa8.34□□□□□ -1.07
NEDD8-206ENST00000531430 CDK15Q96Q40 435 aa8.34□□□□□ -1.07
NEDD8-206ENST00000531430 SERPINI1Q99574 410 aa8.34□□□□□ -1.07
NEDD8-206ENST00000531430 RBBP8Q99708 897 aa8.34□□□□□ -1.07
NEDD8-206ENST00000531430 CPNE1Q99829 537 aa8.34□□□□□ -1.07
NEDD8-206ENST00000531430 ZNF717Q9BY31 904 aaPredicted RBP8.34□□□□□ -1.07
NEDD8-206ENST00000531430 REG4Q9BYZ8 158 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms