RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 MC1RQ01726 317 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 DOC2AQ14183 400 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 XKR4Q5GH76 650 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 ATXN7L2Q5T6C5 722 aaPredicted RBP11.8□□□□□ -0.52
TSKU-203ENST00000527881 ADNP2Q6IQ32 1131 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 PYHIN1Q6K0P9 492 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 IQCHQ86VS3 1027 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 SPRYD4Q8WW59 207 aaPredicted RBP11.8□□□□□ -0.52
TSKU-203ENST00000527881 PPCDCQ96CD2 204 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 CHFRQ96EP1 664 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 GINS4Q9BRT9 223 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 FNDC11Q9BVV2 318 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 CHST8Q9H2A9 424 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 IL17CQ9P0M4 197 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 CFAP97Q9P2B7 532 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 MRTO4Q9UKD2 239 aaKnown RBP11.8□□□□□ -0.52
TSKU-203ENST00000527881 ERVK-19Q9WJR5 959 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 ANKRD36A6QL64 1941 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 AIPO00170 330 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 FAAHO00519 579 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 ZNF254O75437 659 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 EPHX1P07099 455 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 RHOCP08134 193 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 ACP2P11117 423 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 HMGA2P52926 109 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 OR10A3P58181 314 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 PTSQ03393 145 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 HTR4Q13639 388 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 FAM27D1Q5T7N8 215 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 HIST2H2AA3Q6FI13 130 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 PGBD2Q6P3X8 592 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 HAGHLQ6PII5 290 aaPredicted RBP11.8□□□□□ -0.52
TSKU-203ENST00000527881 DLK2Q6UY11 383 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 C16orf59Q7L2K0 433 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 KLHL36Q8N4N3 616 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 FAM26EQ8N5C1 309 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 GPR26Q8NDV2 337 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 KLHDC9Q8NEP7 349 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 OR56B4Q8NH76 319 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 ZDHHC1Q8WTX9 485 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 UBTD2Q8WUN7 234 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 UPF1Q92900 1129 aaKnown RBP eCLIP11.8□□□□□ -0.527e-8■■■■■ 51.7
TSKU-203ENST00000527881 RAB8BQ92930 207 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 ELAC1Q9H777 363 aaKnown RBP11.8□□□□□ -0.52
TSKU-203ENST00000527881 EVA1AQ9H8M9 152 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 GPATCH2Q9NW75 528 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 H2AFY2Q9P0M6 372 aaPredicted RBP11.8□□□□□ -0.52
TSKU-203ENST00000527881 PLXNA1Q9UIW2 1896 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 A0A1B0GW55 424 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 TMEM129A0AVI4 362 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 OR6C75A6NL08 312 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 SGCEO43556 437 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 FZD7O75084 574 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 DUX4L2P0CJ85 424 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 DUX4L3P0CJ86 424 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 DUX4L4P0CJ87 422 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 DUX4L5P0CJ88 424 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 DUX4L6P0CJ89 424 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 DUX4L7P0CJ90 424 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 OR12D1P0DN82 309 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 IDSP22304 550 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 HOXD9P28356 352 aaPredicted RBP11.8□□□□□ -0.52
TSKU-203ENST00000527881 SHC1P29353 583 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 RBMS1P29558 406 aaKnown RBP11.8□□□□□ -0.52
TSKU-203ENST00000527881 SLC1A3P43003 542 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 ZP1P60852 638 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 RAB40BQ12829 278 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 MAP4K2Q12851 820 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 IKZF1Q13422 519 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 VGLL4Q14135 290 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 PUM1Q14671 1186 aaKnown RBP eCLIP11.8□□□□□ -0.52
TSKU-203ENST00000527881 ARTNQ5T4W7 220 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 ARL9Q6T311 187 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 SLC36A4Q6YBV0 504 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 ZNF683Q8IZ20 524 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 CNOT9Q92600 299 aaKnown RBP11.8□□□□□ -0.52
TSKU-203ENST00000527881 POLDIP3Q9BY77 421 aaKnown RBP11.8□□□□□ -0.52
TSKU-203ENST00000527881 MED11Q9P086 117 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 DUX4Q9UBX2 424 aa11.8□□□□□ -0.52
TSKU-203ENST00000527881 GOLGA4Q13439 2230 aaKnown RBP11.8□□□□□ -0.52
TSKU-203ENST00000527881 IRGMA1A4Y4 181 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 A8MXK9 166 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 D6RAR5 112 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 DNASE2O00115 360 aaPredicted RBP11.79□□□□□ -0.52
TSKU-203ENST00000527881 PRODHO43272 600 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 SLC28A2O43868 658 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 PEX14O75381 377 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 CTSHP09668 335 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 LIMS3P0CW19 117 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 LIMS4P0CW20 117 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 MEOX2P50222 304 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 NFATC2Q13469 925 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 ESPNLQ6ZVH7 1005 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 PRSS45Q7RTY3 260 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 RELL2Q8NC24 303 aaPredicted RBP11.79□□□□□ -0.52
TSKU-203ENST00000527881 C2CD4CQ8TF44 421 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 SLC16A10Q8TF71 515 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 SCARB1Q8WTV0 552 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 ARHGAP9Q9BRR9 750 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 C20orf85Q9H1P6 137 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms