RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 SEC22BO75396 215 aa16.98■□□□□ 0.31
CAPN1-203ENST00000525013 REM1O75628 298 aa16.98■□□□□ 0.31
CAPN1-203ENST00000525013 DDCP20711 480 aa16.98■□□□□ 0.31
CAPN1-203ENST00000525013 FNDC7Q5VTL7 733 aa16.98■□□□□ 0.31
CAPN1-203ENST00000525013 NOXRED1Q6NXP6 359 aa16.98■□□□□ 0.31
CAPN1-203ENST00000525013 ANGPTL8Q6UXH0 198 aa16.98■□□□□ 0.31
CAPN1-203ENST00000525013 MEX3BQ6ZN04 569 aaKnown RBP16.98■□□□□ 0.31
CAPN1-203ENST00000525013 LURAP1LQ8IV03 231 aa16.98■□□□□ 0.31
CAPN1-203ENST00000525013 FAM9CQ8IZT9 166 aa16.98■□□□□ 0.31
CAPN1-203ENST00000525013 ERP27Q96DN0 273 aa16.98■□□□□ 0.31
CAPN1-203ENST00000525013 GATA5Q9BWX5 397 aaPredicted RBP16.98■□□□□ 0.31
CAPN1-203ENST00000525013 KLRF1Q9NZS2 232 aa16.98■□□□□ 0.31
CAPN1-203ENST00000525013 GPR55Q9Y2T6 319 aaPredicted RBP16.98■□□□□ 0.31
CAPN1-203ENST00000525013 C15orf41Q9Y2V0 281 aa16.98■□□□□ 0.31
CAPN1-203ENST00000525013 C2orf72A6NCS6 295 aa16.97■□□□□ 0.31
CAPN1-203ENST00000525013 TRIM13O60858 407 aa16.97■□□□□ 0.31
CAPN1-203ENST00000525013 UGT2B11O75310 529 aa16.97■□□□□ 0.31
CAPN1-203ENST00000525013 RSL1D1O76021 490 aaKnown RBP16.97■□□□□ 0.31
CAPN1-203ENST00000525013 JUNP05412 331 aaKnown RBP16.97■□□□□ 0.31
CAPN1-203ENST00000525013 HOXD4P09016 255 aaPredicted RBP16.97■□□□□ 0.31
CAPN1-203ENST00000525013 GABRA1P14867 456 aa16.97■□□□□ 0.31
CAPN1-203ENST00000525013 CDK9P50750 372 aaKnown RBP16.97■□□□□ 0.31
CAPN1-203ENST00000525013 CORO7P57737 925 aa16.97■□□□□ 0.31
CAPN1-203ENST00000525013 PCLAFQ15004 111 aa16.97■□□□□ 0.31
CAPN1-203ENST00000525013 TIGD3Q6B0B8 471 aa16.97■□□□□ 0.31
CAPN1-203ENST00000525013 FAM71E1Q6IPT2 247 aa16.97■□□□□ 0.31
CAPN1-203ENST00000525013 SLC30A6Q6NXT4 461 aa16.97■□□□□ 0.31
CAPN1-203ENST00000525013 OR7G2Q8NG99 324 aa16.97■□□□□ 0.31
CAPN1-203ENST00000525013 OR1J4Q8NGS1 313 aa16.97■□□□□ 0.31
CAPN1-203ENST00000525013 FAM76AQ8TAV0 307 aa16.97■□□□□ 0.31
CAPN1-203ENST00000525013 HGDQ93099 445 aa16.97■□□□□ 0.31
CAPN1-203ENST00000525013 TMBIM1Q969X1 311 aa16.97■□□□□ 0.31
CAPN1-203ENST00000525013 TMEM41AQ96HV5 264 aa16.97■□□□□ 0.31
CAPN1-203ENST00000525013 APOPT1Q96IL0 206 aa16.97■□□□□ 0.31
CAPN1-203ENST00000525013 NODALQ96S42 347 aa16.97■□□□□ 0.31
CAPN1-203ENST00000525013 SPOCK3Q9BQ16 436 aa16.97■□□□□ 0.31
CAPN1-203ENST00000525013 OSBPL11Q9BXB4 747 aa16.97■□□□□ 0.31
CAPN1-203ENST00000525013 TRIM8Q9BZR9 551 aa16.97■□□□□ 0.31
CAPN1-203ENST00000525013 GALNT9Q9HCQ5 603 aa16.97■□□□□ 0.31
CAPN1-203ENST00000525013 MYNNQ9NPC7 610 aa16.97■□□□□ 0.31
CAPN1-203ENST00000525013 SLC6A5Q9Y345 797 aa16.97■□□□□ 0.31
CAPN1-203ENST00000525013 PTGDR2Q9Y5Y4 395 aa16.97■□□□□ 0.31
CAPN1-203ENST00000525013 A0A0G2JNJ9 132 aa16.96■□□□□ 0.31
CAPN1-203ENST00000525013 MYO1GB0I1T2 1018 aa16.96■□□□□ 0.31
CAPN1-203ENST00000525013 AZIN1O14977 448 aa16.96■□□□□ 0.31
CAPN1-203ENST00000525013 TO15178 435 aa16.96■□□□□ 0.31
CAPN1-203ENST00000525013 PLOD3O60568 738 aa16.96■□□□□ 0.31
CAPN1-203ENST00000525013 ICOSLGO75144 302 aa16.96■□□□□ 0.31
CAPN1-203ENST00000525013 ERN1O75460 977 aaKnown RBP16.96■□□□□ 0.31
CAPN1-203ENST00000525013 HPNP05981 417 aa16.96■□□□□ 0.31
CAPN1-203ENST00000525013 NUDT17P0C025 328 aa16.96■□□□□ 0.31
CAPN1-203ENST00000525013 ELAVL4P26378 380 aaKnown RBP16.96■□□□□ 0.31
CAPN1-203ENST00000525013 KRT20P35900 424 aa16.96■□□□□ 0.31
CAPN1-203ENST00000525013 ZFP36L2P47974 494 aaKnown RBP16.96■□□□□ 0.31
CAPN1-203ENST00000525013 NCBP2P52298 156 aaKnown RBP eCLIP16.96■□□□□ 0.31
CAPN1-203ENST00000525013 CEBPEQ15744 281 aa16.96■□□□□ 0.31
CAPN1-203ENST00000525013 PRSS53Q2L4Q9 553 aa16.96■□□□□ 0.31
CAPN1-203ENST00000525013 TRABD2AQ86V40 505 aa16.96■□□□□ 0.31
CAPN1-203ENST00000525013 ZNF295-AS1Q8N0V1 137 aa16.96■□□□□ 0.31
CAPN1-203ENST00000525013 RIBC1Q8N443 379 aaPredicted RBP16.96■□□□□ 0.31
CAPN1-203ENST00000525013 TMCO6Q96DC7 493 aa16.96■□□□□ 0.31
CAPN1-203ENST00000525013 COL21A1Q96P44 957 aa16.96■□□□□ 0.31
CAPN1-203ENST00000525013 BTBD9Q96Q07 612 aa16.96■□□□□ 0.31
CAPN1-203ENST00000525013 UBQLN3Q9H347 655 aa16.96■□□□□ 0.31
CAPN1-203ENST00000525013 FOLH1BQ9HBA9 442 aa16.96■□□□□ 0.31
CAPN1-203ENST00000525013 TAS2R9Q9NYW1 312 aa16.96■□□□□ 0.31
CAPN1-203ENST00000525013 Q9UFV3 132 aa16.96■□□□□ 0.31
CAPN1-203ENST00000525013 WBP11Q9Y2W2 641 aaKnown RBP16.96■□□□□ 0.31
CAPN1-203ENST00000525013 PRAMEF25A6NGN4 478 aa16.95■□□□□ 0.3
CAPN1-203ENST00000525013 SLC28A1O00337 649 aa16.95■□□□□ 0.3
CAPN1-203ENST00000525013 RGS14O43566 566 aa16.95■□□□□ 0.3
CAPN1-203ENST00000525013 SPAG7O75391 227 aa16.95■□□□□ 0.3
CAPN1-203ENST00000525013 TOXO94900 526 aa16.95■□□□□ 0.3
CAPN1-203ENST00000525013 CT45A8P0DMV1 189 aa16.95■□□□□ 0.3
CAPN1-203ENST00000525013 CT45A9P0DMV2 189 aa16.95■□□□□ 0.3
CAPN1-203ENST00000525013 NTSP30990 170 aa16.95■□□□□ 0.3
CAPN1-203ENST00000525013 ADH7P40394 386 aa16.95■□□□□ 0.3
CAPN1-203ENST00000525013 ZNF155Q12901 538 aaPredicted RBP16.95■□□□□ 0.3
CAPN1-203ENST00000525013 SNTA1Q13424 505 aa16.95■□□□□ 0.3
CAPN1-203ENST00000525013 EIPR1Q53HC9 387 aa16.95■□□□□ 0.3
CAPN1-203ENST00000525013 CT45A2Q5DJT8 189 aa16.95■□□□□ 0.3
CAPN1-203ENST00000525013 SLC44A2Q8IWA5 706 aaPredicted RBP16.95■□□□□ 0.3
CAPN1-203ENST00000525013 ULK2Q8IYT8 1036 aa16.95■□□□□ 0.3
CAPN1-203ENST00000525013 BANPQ8N9N5 519 aa16.95■□□□□ 0.3
CAPN1-203ENST00000525013 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.95■□□□□ 0.3
CAPN1-203ENST00000525013 VSTM2LQ96N03 204 aa16.95■□□□□ 0.3
CAPN1-203ENST00000525013 FAM111AQ96PZ2 611 aa16.95■□□□□ 0.3
CAPN1-203ENST00000525013 ADOQ96SZ5 270 aa16.95■□□□□ 0.3
CAPN1-203ENST00000525013 TIMP4Q99727 224 aa16.95■□□□□ 0.3
CAPN1-203ENST00000525013 TRMOQ9BU70 441 aa16.95■□□□□ 0.3
CAPN1-203ENST00000525013 ENKD1Q9H0I2 346 aa16.95■□□□□ 0.3
CAPN1-203ENST00000525013 STMN4Q9H169 189 aaPredicted RBP16.95■□□□□ 0.3
CAPN1-203ENST00000525013 LRTM1Q9HBL6 345 aa16.95■□□□□ 0.3
CAPN1-203ENST00000525013 SERHLQ9NQF3 203 aa16.95■□□□□ 0.3
CAPN1-203ENST00000525013 C1orf109Q9NX04 203 aa16.95■□□□□ 0.3
CAPN1-203ENST00000525013 TAS2R7Q9NYW3 318 aa16.95■□□□□ 0.3
CAPN1-203ENST00000525013 MAPRE3Q9UPY8 281 aa16.95■□□□□ 0.3
CAPN1-203ENST00000525013 OR10H1Q9Y4A9 318 aa16.95■□□□□ 0.3
CAPN1-203ENST00000525013 CCDC168Q8NDH2 2452 aa16.94■□□□□ 0.3
CAPN1-203ENST00000525013 OR6C70A6NIJ9 312 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms