RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 CALHM2Q9HA72 323 aa17.11■□□□□ 0.33
PTP4A3-206ENST00000524028 NMRK1Q9NWW6 199 aa17.11■□□□□ 0.33
PTP4A3-206ENST00000524028 UTS2RQ9UKP6 389 aa17.11■□□□□ 0.33
PTP4A3-206ENST00000524028 MAPRE3Q9UPY8 281 aa17.11■□□□□ 0.33
PTP4A3-206ENST00000524028 EXO1Q9UQ84 846 aaKnown RBP17.11■□□□□ 0.33
PTP4A3-206ENST00000524028 GPR55Q9Y2T6 319 aaPredicted RBP17.11■□□□□ 0.33
PTP4A3-206ENST00000524028 ZNF780BQ9Y6R6 833 aa17.11■□□□□ 0.33
PTP4A3-206ENST00000524028 HRNRQ86YZ3 2850 aaPredicted RBP17.11■□□□□ 0.33
PTP4A3-206ENST00000524028 A0A087WUV0 522 aaPredicted RBP17.1■□□□□ 0.33
PTP4A3-206ENST00000524028 DLX3O60479 287 aa17.1■□□□□ 0.33
PTP4A3-206ENST00000524028 SUPT7LO94864 414 aa17.1■□□□□ 0.33
PTP4A3-206ENST00000524028 ACTL6AO96019 429 aa17.1■□□□□ 0.33
PTP4A3-206ENST00000524028 IL3P08700 152 aa17.1■□□□□ 0.33
PTP4A3-206ENST00000524028 RHOXF2BP0C7M4 288 aa17.1■□□□□ 0.33
PTP4A3-206ENST00000524028 CTAGE8P0CG41 777 aa17.1■□□□□ 0.33
PTP4A3-206ENST00000524028 TACR1P25103 407 aa17.1■□□□□ 0.33
PTP4A3-206ENST00000524028 CTSSP25774 331 aa17.1■□□□□ 0.33
PTP4A3-206ENST00000524028 DCAF7P61962 342 aa17.1■□□□□ 0.33
PTP4A3-206ENST00000524028 SF3B4Q15427 424 aaKnown RBP eCLIP17.1■□□□□ 0.334e-7■■■■■ 27.4
PTP4A3-206ENST00000524028 PLXDC2Q6UX71 529 aa17.1■□□□□ 0.33
PTP4A3-206ENST00000524028 CTAGE4Q8IX94 777 aa17.1■□□□□ 0.33
PTP4A3-206ENST00000524028 CCDC116Q8IYX3 515 aa17.1■□□□□ 0.33
PTP4A3-206ENST00000524028 ZPLD1Q8TCW7 415 aa17.1■□□□□ 0.33
PTP4A3-206ENST00000524028 TMBIM1Q969X1 311 aa17.1■□□□□ 0.33
PTP4A3-206ENST00000524028 TMEM237Q96Q45 408 aa17.1■□□□□ 0.33
PTP4A3-206ENST00000524028 TUBA1CQ9BQE3 449 aa17.1■□□□□ 0.33
PTP4A3-206ENST00000524028 ACPTQ9BZG2 426 aa17.1■□□□□ 0.33
PTP4A3-206ENST00000524028 KLRF1Q9NZS2 232 aa17.1■□□□□ 0.33
PTP4A3-206ENST00000524028 JKAMPQ9P055 326 aa17.1■□□□□ 0.33
PTP4A3-206ENST00000524028 PRODH2Q9UF12 536 aa17.1■□□□□ 0.33
PTP4A3-206ENST00000524028 MCM8Q9UJA3 840 aa17.1■□□□□ 0.33
PTP4A3-206ENST00000524028 DLGAP4Q9Y2H0 992 aa17.1■□□□□ 0.33
PTP4A3-206ENST00000524028 AKAP6Q13023 2319 aa17.1■□□□□ 0.33
PTP4A3-206ENST00000524028 EXPH5Q8NEV8 1989 aa17.09■□□□□ 0.33
PTP4A3-206ENST00000524028 PRRC2AP48634 2157 aaKnown RBP17.09■□□□□ 0.33
PTP4A3-206ENST00000524028 PRAMEF25A6NGN4 478 aa17.09■□□□□ 0.33
PTP4A3-206ENST00000524028 FRG2CA6NGY1 282 aa17.09■□□□□ 0.33
PTP4A3-206ENST00000524028 CBR3O75828 277 aa17.09■□□□□ 0.33
PTP4A3-206ENST00000524028 HSD3B1P14060 373 aa17.09■□□□□ 0.33
PTP4A3-206ENST00000524028 CPN1P15169 458 aa17.09■□□□□ 0.33
PTP4A3-206ENST00000524028 HSD3B2P26439 372 aa17.09■□□□□ 0.33
PTP4A3-206ENST00000524028 HTR6P50406 440 aa17.09■□□□□ 0.33
PTP4A3-206ENST00000524028 CORO7P57737 925 aa17.09■□□□□ 0.33
PTP4A3-206ENST00000524028 HMGCS1Q01581 520 aa17.09■□□□□ 0.33
PTP4A3-206ENST00000524028 FOXF2Q12947 444 aa17.09■□□□□ 0.33
PTP4A3-206ENST00000524028 DAZAP2Q15038 168 aaPredicted RBP17.09■□□□□ 0.33
PTP4A3-206ENST00000524028 TIFABQ6ZNK6 161 aa17.09■□□□□ 0.33
PTP4A3-206ENST00000524028 RDH11Q8TC12 318 aa17.09■□□□□ 0.33
PTP4A3-206ENST00000524028 ZNF675Q8TD23 568 aa17.09■□□□□ 0.33
PTP4A3-206ENST00000524028 KAT2AQ92830 837 aa17.09■□□□□ 0.33
PTP4A3-206ENST00000524028 LRRC46Q96FV0 321 aa17.09■□□□□ 0.33
PTP4A3-206ENST00000524028 RMND5BQ96G75 393 aaPredicted RBP17.09■□□□□ 0.33
PTP4A3-206ENST00000524028 APIPQ96GX9 242 aa17.09■□□□□ 0.33
PTP4A3-206ENST00000524028 ZNF382Q96SR6 550 aa17.09■□□□□ 0.33
PTP4A3-206ENST00000524028 OR2B2Q9GZK3 357 aa17.09■□□□□ 0.33
PTP4A3-206ENST00000524028 FOXD3Q9UJU5 478 aaPredicted RBP17.09■□□□□ 0.33
PTP4A3-206ENST00000524028 PLEKHA6Q9Y2H5 1048 aa17.09■□□□□ 0.33
PTP4A3-206ENST00000524028 EXOC1LA0A1B0GW35 172 aa17.08■□□□□ 0.32
PTP4A3-206ENST00000524028 OR6C70A6NIJ9 312 aa17.08■□□□□ 0.32
PTP4A3-206ENST00000524028 B4DXG7 233 aa17.08■□□□□ 0.32
PTP4A3-206ENST00000524028 DIAPH2O60879 1101 aa17.08■□□□□ 0.32
PTP4A3-206ENST00000524028 ESRRBO95718 433 aa17.08■□□□□ 0.32
PTP4A3-206ENST00000524028 KRT6AP02538 564 aa17.08■□□□□ 0.32
PTP4A3-206ENST00000524028 KRT6BP04259 564 aa17.08■□□□□ 0.32
PTP4A3-206ENST00000524028 CT45A8P0DMV1 189 aa17.08■□□□□ 0.32
PTP4A3-206ENST00000524028 CT45A9P0DMV2 189 aa17.08■□□□□ 0.32
PTP4A3-206ENST00000524028 CD99P14209 185 aa17.08■□□□□ 0.32
PTP4A3-206ENST00000524028 IMPDH1P20839 514 aa17.08■□□□□ 0.32
PTP4A3-206ENST00000524028 KRT6CP48668 564 aa17.08■□□□□ 0.32
PTP4A3-206ENST00000524028 CSTF3Q12996 717 aaKnown RBP17.08■□□□□ 0.32
PTP4A3-206ENST00000524028 RASA2Q15283 850 aa17.08■□□□□ 0.32
PTP4A3-206ENST00000524028 CEBPEQ15744 281 aa17.08■□□□□ 0.32
PTP4A3-206ENST00000524028 CT45A2Q5DJT8 189 aa17.08■□□□□ 0.32
PTP4A3-206ENST00000524028 GPRIN3Q6ZVF9 776 aa17.08■□□□□ 0.32
PTP4A3-206ENST00000524028 ADGRE4PQ86SQ3 457 aa17.08■□□□□ 0.32
PTP4A3-206ENST00000524028 TRIM42Q8IWZ5 723 aa17.08■□□□□ 0.32
PTP4A3-206ENST00000524028 OR9A2Q8NGT5 310 aa17.08■□□□□ 0.32
PTP4A3-206ENST00000524028 OR14L1PQ8NHC6 308 aa17.08■□□□□ 0.32
PTP4A3-206ENST00000524028 LINC01560Q8TB33 94 aa17.08■□□□□ 0.32
PTP4A3-206ENST00000524028 METTL6Q8TCB7 284 aa17.08■□□□□ 0.32
PTP4A3-206ENST00000524028 ZNF592Q92610 1267 aa17.08■□□□□ 0.32
PTP4A3-206ENST00000524028 COL21A1Q96P44 957 aa17.08■□□□□ 0.32
PTP4A3-206ENST00000524028 BTBD9Q96Q07 612 aa17.08■□□□□ 0.32
PTP4A3-206ENST00000524028 G6PC3Q9BUM1 346 aa17.08■□□□□ 0.32
PTP4A3-206ENST00000524028 PFDN4Q9NQP4 134 aa17.08■□□□□ 0.32
PTP4A3-206ENST00000524028 FBXL2Q9UKC9 423 aa17.08■□□□□ 0.32
PTP4A3-206ENST00000524028 MAP1AP78559 2803 aaPredicted RBP17.08■□□□□ 0.32
PTP4A3-206ENST00000524028 MED12Q93074 2177 aa17.07■□□□□ 0.32
PTP4A3-206ENST00000524028 TUBAL3A6NHL2 446 aa17.07■□□□□ 0.32
PTP4A3-206ENST00000524028 EEF1E1-BLOC1S5C9J1V9 151 aa17.07■□□□□ 0.32
PTP4A3-206ENST00000524028 EEF1E1O43324 174 aaKnown RBP17.07■□□□□ 0.32
PTP4A3-206ENST00000524028 PCDH7O60245 1069 aa17.07■□□□□ 0.32
PTP4A3-206ENST00000524028 TSPAN2O60636 221 aa17.07■□□□□ 0.32
PTP4A3-206ENST00000524028 ULK1O75385 1050 aa17.07■□□□□ 0.32
PTP4A3-206ENST00000524028 REM1O75628 298 aa17.07■□□□□ 0.32
PTP4A3-206ENST00000524028 IL18BPO95998 194 aa17.07■□□□□ 0.32
PTP4A3-206ENST00000524028 TMIGD3P0DMS9 266 aaPredicted RBP17.07■□□□□ 0.32
PTP4A3-206ENST00000524028 CYP4B1P13584 511 aa17.07■□□□□ 0.32
PTP4A3-206ENST00000524028 DRD2P14416 443 aa17.07■□□□□ 0.32
PTP4A3-206ENST00000524028 TAC1P20366 129 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms