RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 SPATS1Q496A3 300 aa4.78□□□□□ -1.64
PABPC1-223ENST00000523636 NKAIN1Q4KMZ8 207 aa4.78□□□□□ -1.64
PABPC1-223ENST00000523636 MPPE1Q53F39 396 aa4.78□□□□□ -1.64
PABPC1-223ENST00000523636 IFI44LQ53G44 452 aa4.78□□□□□ -1.64
PABPC1-223ENST00000523636 RABL3Q5HYI8 236 aa4.78□□□□□ -1.64
PABPC1-223ENST00000523636 EFHC1Q5JVL4 640 aa4.78□□□□□ -1.64
PABPC1-223ENST00000523636 DCST1Q5T197 706 aa4.78□□□□□ -1.64
PABPC1-223ENST00000523636 FAM91A1Q658Y4 838 aa4.78□□□□□ -1.64
PABPC1-223ENST00000523636 C18orf63Q68DL7 685 aa4.78□□□□□ -1.64
PABPC1-223ENST00000523636 FCRL6Q6DN72 434 aa4.78□□□□□ -1.64
PABPC1-223ENST00000523636 FAM199XQ6PEV8 388 aaPredicted RBP4.78□□□□□ -1.64
PABPC1-223ENST00000523636 ARSKQ6UWY0 536 aa4.78□□□□□ -1.64
PABPC1-223ENST00000523636 PAMR1Q6UXH9 720 aa4.78□□□□□ -1.64
PABPC1-223ENST00000523636 RANBP10Q6VN20 620 aa4.78□□□□□ -1.64
PABPC1-223ENST00000523636 ZNF704Q6ZNC4 412 aaPredicted RBP4.78□□□□□ -1.64
PABPC1-223ENST00000523636 LRRC70Q7Z2Q7 622 aa4.78□□□□□ -1.64
PABPC1-223ENST00000523636 PEX26Q7Z412 305 aa4.78□□□□□ -1.64
PABPC1-223ENST00000523636 IRF2BP2Q7Z5L9 587 aa4.78□□□□□ -1.64
PABPC1-223ENST00000523636 CRYBG2Q8N1P7 616 aa4.78□□□□□ -1.64
PABPC1-223ENST00000523636 PYROXD2Q8N2H3 581 aa4.78□□□□□ -1.64
PABPC1-223ENST00000523636 MREGQ8N565 214 aa4.78□□□□□ -1.64
PABPC1-223ENST00000523636 ANKFN1Q8N957 763 aa4.78□□□□□ -1.64
PABPC1-223ENST00000523636 RASGEF1AQ8N9B8 481 aa4.78□□□□□ -1.64
PABPC1-223ENST00000523636 TMIEQ8NEW7 156 aa4.78□□□□□ -1.64
PABPC1-223ENST00000523636 OR56A1Q8NGH5 318 aa4.78□□□□□ -1.64
PABPC1-223ENST00000523636 CCL4L1Q8NHW4 92 aa4.78□□□□□ -1.64
PABPC1-223ENST00000523636 WDR60Q8WVS4 1066 aa4.78□□□□□ -1.64
PABPC1-223ENST00000523636 PATE1Q8WXA2 126 aa4.78□□□□□ -1.64
PABPC1-223ENST00000523636 IFT81Q8WYA0 676 aa4.78□□□□□ -1.64
PABPC1-223ENST00000523636 OR1E3Q8WZA6 343 aa4.78□□□□□ -1.64
PABPC1-223ENST00000523636 DPF1Q92782 380 aa4.78□□□□□ -1.64
PABPC1-223ENST00000523636 RASD2Q96D21 266 aa4.78□□□□□ -1.64
PABPC1-223ENST00000523636 DTD2Q96FN9 168 aa4.78□□□□□ -1.64
PABPC1-223ENST00000523636 HES6Q96HZ4 224 aa4.78□□□□□ -1.64
PABPC1-223ENST00000523636 QRFPRQ96P65 431 aa4.78□□□□□ -1.64
PABPC1-223ENST00000523636 TAAR6Q96RI8 345 aa4.78□□□□□ -1.64
PABPC1-223ENST00000523636 ZNF559Q9BR84 538 aa4.78□□□□□ -1.64
PABPC1-223ENST00000523636 KRTAP3-1Q9BYR8 98 aa4.78□□□□□ -1.64
PABPC1-223ENST00000523636 ULBP3Q9BZM4 244 aa4.78□□□□□ -1.64
PABPC1-223ENST00000523636 DCLK3Q9C098 648 aa4.78□□□□□ -1.64
PABPC1-223ENST00000523636 ZBTB26Q9HCK0 441 aa4.78□□□□□ -1.64
PABPC1-223ENST00000523636 ALKBH4Q9NXW9 302 aa4.78□□□□□ -1.64
PABPC1-223ENST00000523636 PKD2L2Q9NZM6 624 aa4.78□□□□□ -1.64
PABPC1-223ENST00000523636 LARSQ9P2J5 1176 aaKnown RBP4.78□□□□□ -1.64
PABPC1-223ENST00000523636 CRNNQ9UBG3 495 aaPredicted RBP4.78□□□□□ -1.64
PABPC1-223ENST00000523636 STOML2Q9UJZ1 356 aa4.78□□□□□ -1.64
PABPC1-223ENST00000523636 TSPAN16Q9UKR8 245 aa4.78□□□□□ -1.64
PABPC1-223ENST00000523636 SCML2Q9UQR0 700 aa4.78□□□□□ -1.64
PABPC1-223ENST00000523636 KCNK6Q9Y257 313 aa4.78□□□□□ -1.64
PABPC1-223ENST00000523636 MRPS7Q9Y2R9 242 aaKnown RBP4.78□□□□□ -1.64
PABPC1-223ENST00000523636 TSC22D4Q9Y3Q8 395 aa4.78□□□□□ -1.64
PABPC1-223ENST00000523636 A0A087X0T9 212 aa4.77□□□□□ -1.65
PABPC1-223ENST00000523636 TEX13CA0A0J9YWL9 993 aa4.77□□□□□ -1.65
PABPC1-223ENST00000523636 NPIPB13A6NJU9 1138 aa4.77□□□□□ -1.65
PABPC1-223ENST00000523636 B4DGG1 531 aa4.77□□□□□ -1.65
PABPC1-223ENST00000523636 NPIPB4C9JG80 1138 aa4.77□□□□□ -1.65
PABPC1-223ENST00000523636 ANKRD63C9JTQ0 380 aa4.77□□□□□ -1.65
PABPC1-223ENST00000523636 PGRMC1O00264 195 aaKnown RBP4.77□□□□□ -1.65
PABPC1-223ENST00000523636 XPO1O14980 1071 aaKnown RBP4.77□□□□□ -1.65
PABPC1-223ENST00000523636 EPHB6O15197 1021 aa4.77□□□□□ -1.65
PABPC1-223ENST00000523636 SMAD9O15198 467 aaKnown RBP4.77□□□□□ -1.65
PABPC1-223ENST00000523636 PPM1DO15297 605 aa4.77□□□□□ -1.65
PABPC1-223ENST00000523636 TBX19O60806 448 aa4.77□□□□□ -1.65
PABPC1-223ENST00000523636 PAGE4O60829 102 aa4.77□□□□□ -1.65
PABPC1-223ENST00000523636 B4GALT2O60909 372 aa4.77□□□□□ -1.65
PABPC1-223ENST00000523636 NME6O75414 186 aaPredicted RBP4.77□□□□□ -1.65
PABPC1-223ENST00000523636 PRSS23O95084 383 aa4.77□□□□□ -1.65
PABPC1-223ENST00000523636 UNC5CO95185 931 aa4.77□□□□□ -1.65
PABPC1-223ENST00000523636 SYF2O95926 243 aaKnown RBP4.77□□□□□ -1.65
PABPC1-223ENST00000523636 AGTP01019 485 aa4.77□□□□□ -1.65
PABPC1-223ENST00000523636 PIGRP01833 764 aa4.77□□□□□ -1.65
PABPC1-223ENST00000523636 LCATP04180 440 aa4.77□□□□□ -1.65
PABPC1-223ENST00000523636 FESP07332 822 aa4.77□□□□□ -1.65
PABPC1-223ENST00000523636 CHRM2P08172 466 aa4.77□□□□□ -1.65
PABPC1-223ENST00000523636 SRPRAP08240 638 aaKnown RBP4.77□□□□□ -1.65
PABPC1-223ENST00000523636 FAM228BP0C875 321 aa4.77□□□□□ -1.65
PABPC1-223ENST00000523636 OR8G3PP0DMU2 310 aa4.77□□□□□ -1.65
PABPC1-223ENST00000523636 UMPSP11172 480 aa4.77□□□□□ -1.65
PABPC1-223ENST00000523636 VCLP18206 1134 aa4.77□□□□□ -1.65
PABPC1-223ENST00000523636 OTX2P32243 289 aa4.77□□□□□ -1.65
PABPC1-223ENST00000523636 CDKN1AP38936 164 aa4.77□□□□□ -1.65
PABPC1-223ENST00000523636 PNPLA4P41247 253 aa4.77□□□□□ -1.65
PABPC1-223ENST00000523636 TSFMP43897 325 aaKnown RBP4.77□□□□□ -1.65
PABPC1-223ENST00000523636 ENTPD1P49961 510 aa4.77□□□□□ -1.65
PABPC1-223ENST00000523636 ZNF135P52742 658 aaPredicted RBP4.77□□□□□ -1.65
PABPC1-223ENST00000523636 PNLIPRP2P54317 469 aa4.77□□□□□ -1.65
PABPC1-223ENST00000523636 UCP3P55916 312 aa4.77□□□□□ -1.65
PABPC1-223ENST00000523636 VBP1P61758 197 aa4.77□□□□□ -1.65
PABPC1-223ENST00000523636 TUBA4AP68366 448 aa4.77□□□□□ -1.65
PABPC1-223ENST00000523636 PHEXP78562 749 aa4.77□□□□□ -1.65
PABPC1-223ENST00000523636 GUCY2DQ02846 1103 aa4.77□□□□□ -1.65
PABPC1-223ENST00000523636 ZNF844Q08AG5 666 aa4.77□□□□□ -1.65
PABPC1-223ENST00000523636 NIPAL4Q0D2K0 466 aa4.77□□□□□ -1.65
PABPC1-223ENST00000523636 PDZK1IP1Q13113 114 aa4.77□□□□□ -1.65
PABPC1-223ENST00000523636 ARHGEF7Q14155 803 aa4.77□□□□□ -1.65
PABPC1-223ENST00000523636 RFTN1Q14699 578 aaPredicted RBP4.77□□□□□ -1.65
PABPC1-223ENST00000523636 HERC3Q15034 1050 aa4.77□□□□□ -1.65
PABPC1-223ENST00000523636 ELOCQ15369 112 aa4.77□□□□□ -1.65
PABPC1-223ENST00000523636 C3AR1Q16581 482 aa4.77□□□□□ -1.65
PABPC1-223ENST00000523636 SLC36A3Q495N2 470 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms