RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 MYO1GB0I1T2 1018 aa17.08■□□□□ 0.32
SPIDR-220ENST00000522900 KDM4EB2RXH2 506 aaPredicted RBP17.08■□□□□ 0.32
SPIDR-220ENST00000522900 H3BQF6 201 aa17.08■□□□□ 0.32
SPIDR-220ENST00000522900 ACOX3O15254 700 aa17.08■□□□□ 0.32
SPIDR-220ENST00000522900 WDR1O75083 606 aa17.08■□□□□ 0.32
SPIDR-220ENST00000522900 ICOSLGO75144 302 aa17.08■□□□□ 0.32
SPIDR-220ENST00000522900 HPNP05981 417 aa17.08■□□□□ 0.32
SPIDR-220ENST00000522900 CT45A8P0DMV1 189 aa17.08■□□□□ 0.32
SPIDR-220ENST00000522900 CT45A9P0DMV2 189 aa17.08■□□□□ 0.32
SPIDR-220ENST00000522900 UROSP10746 265 aa17.08■□□□□ 0.32
SPIDR-220ENST00000522900 MPIP34949 423 aa17.08■□□□□ 0.32
SPIDR-220ENST00000522900 RPP38P78345 283 aaKnown RBP17.08■□□□□ 0.32
SPIDR-220ENST00000522900 ZNF763Q0D2J5 394 aa17.08■□□□□ 0.32
SPIDR-220ENST00000522900 KIAA0040Q15053 153 aa17.08■□□□□ 0.32
SPIDR-220ENST00000522900 EIPR1Q53HC9 387 aa17.08■□□□□ 0.32
SPIDR-220ENST00000522900 CT45A2Q5DJT8 189 aa17.08■□□□□ 0.32
SPIDR-220ENST00000522900 TIGD3Q6B0B8 471 aa17.08■□□□□ 0.32
SPIDR-220ENST00000522900 NPSR1Q6W5P4 371 aa17.08■□□□□ 0.32
SPIDR-220ENST00000522900 MEX3BQ6ZN04 569 aaKnown RBP17.08■□□□□ 0.32
SPIDR-220ENST00000522900 SEM1Q6ZVN7 128 aa17.08■□□□□ 0.32
SPIDR-220ENST00000522900 ULK2Q8IYT8 1036 aa17.08■□□□□ 0.32
SPIDR-220ENST00000522900 SAMD14Q8IZD0 417 aaPredicted RBP17.08■□□□□ 0.32
SPIDR-220ENST00000522900 LIX1Q8N485 282 aa17.08■□□□□ 0.32
SPIDR-220ENST00000522900 BANPQ8N9N5 519 aa17.08■□□□□ 0.32
SPIDR-220ENST00000522900 TMEM41AQ96HV5 264 aa17.08■□□□□ 0.32
SPIDR-220ENST00000522900 EGLN2Q96KS0 407 aa17.08■□□□□ 0.32
SPIDR-220ENST00000522900 VSTM2LQ96N03 204 aa17.08■□□□□ 0.32
SPIDR-220ENST00000522900 BBS4Q96RK4 519 aa17.08■□□□□ 0.32
SPIDR-220ENST00000522900 TIMP4Q99727 224 aa17.08■□□□□ 0.32
SPIDR-220ENST00000522900 RRAGDQ9NQL2 400 aaPredicted RBP17.08■□□□□ 0.32
SPIDR-220ENST00000522900 GIMAP4Q9NUV9 329 aa17.08■□□□□ 0.32
SPIDR-220ENST00000522900 SLC17A7Q9P2U7 560 aa17.08■□□□□ 0.32
SPIDR-220ENST00000522900 Q9UFV3 132 aa17.08■□□□□ 0.32
SPIDR-220ENST00000522900 C15orf38-AP3S2A0A0A6YYH1 394 aa17.07■□□□□ 0.32
SPIDR-220ENST00000522900 PLOD3O60568 738 aa17.07■□□□□ 0.32
SPIDR-220ENST00000522900 SEC22BO75396 215 aa17.07■□□□□ 0.32
SPIDR-220ENST00000522900 REM1O75628 298 aa17.07■□□□□ 0.32
SPIDR-220ENST00000522900 BCAS2O75934 225 aaPredicted RBP17.07■□□□□ 0.32
SPIDR-220ENST00000522900 RSL1D1O76021 490 aaKnown RBP17.07■□□□□ 0.32
SPIDR-220ENST00000522900 JUNP05412 331 aaKnown RBP17.07■□□□□ 0.32
SPIDR-220ENST00000522900 NUDT17P0C025 328 aa17.07■□□□□ 0.32
SPIDR-220ENST00000522900 TACR1P25103 407 aa17.07■□□□□ 0.32
SPIDR-220ENST00000522900 PTPN6P29350 595 aa17.07■□□□□ 0.32
SPIDR-220ENST00000522900 ALDH3A1P30838 453 aa17.07■□□□□ 0.32
SPIDR-220ENST00000522900 GSTM5P46439 218 aa17.07■□□□□ 0.32
SPIDR-220ENST00000522900 CRYZQ08257 329 aaKnown RBP17.07■□□□□ 0.32
SPIDR-220ENST00000522900 TOMM20Q15388 145 aa17.07■□□□□ 0.32
SPIDR-220ENST00000522900 WIPI1Q5MNZ9 446 aaPredicted RBP17.07■□□□□ 0.32
SPIDR-220ENST00000522900 ANGPTL8Q6UXH0 198 aa17.07■□□□□ 0.32
SPIDR-220ENST00000522900 TRABD2AQ86V40 505 aa17.07■□□□□ 0.32
SPIDR-220ENST00000522900 FAM9CQ8IZT9 166 aa17.07■□□□□ 0.32
SPIDR-220ENST00000522900 OR4N2Q8NGD1 307 aa17.07■□□□□ 0.32
SPIDR-220ENST00000522900 OR1J4Q8NGS1 313 aa17.07■□□□□ 0.32
SPIDR-220ENST00000522900 OR2T11Q8NH01 316 aa17.07■□□□□ 0.32
SPIDR-220ENST00000522900 ERP27Q96DN0 273 aa17.07■□□□□ 0.32
SPIDR-220ENST00000522900 BTBD9Q96Q07 612 aa17.07■□□□□ 0.32
SPIDR-220ENST00000522900 TREX2Q9BQ50 279 aaPredicted RBP17.07■□□□□ 0.32
SPIDR-220ENST00000522900 TUBB1Q9H4B7 451 aa17.07■□□□□ 0.32
SPIDR-220ENST00000522900 FOLH1BQ9HBA9 442 aa17.07■□□□□ 0.32
SPIDR-220ENST00000522900 MYNNQ9NPC7 610 aa17.07■□□□□ 0.32
SPIDR-220ENST00000522900 KCNJ16Q9NPI9 418 aa17.07■□□□□ 0.32
SPIDR-220ENST00000522900 TAS2R7Q9NYW3 318 aa17.07■□□□□ 0.32
SPIDR-220ENST00000522900 FIS1Q9Y3D6 152 aa17.07■□□□□ 0.32
SPIDR-220ENST00000522900 NINQ8N4C6 2090 aa17.07■□□□□ 0.32
SPIDR-220ENST00000522900 DNAJC13O75165 2243 aa17.06■□□□□ 0.32
SPIDR-220ENST00000522900 PDZD2O15018 2839 aa17.06■□□□□ 0.32
SPIDR-220ENST00000522900 TRIM13O60858 407 aa17.06■□□□□ 0.32
SPIDR-220ENST00000522900 GABRA1P14867 456 aa17.06■□□□□ 0.32
SPIDR-220ENST00000522900 IGFBP2P18065 325 aa17.06■□□□□ 0.32
SPIDR-220ENST00000522900 ZFP36L2P47974 494 aaKnown RBP17.06■□□□□ 0.32
SPIDR-220ENST00000522900 NCBP2P52298 156 aaKnown RBP eCLIP17.06■□□□□ 0.32
SPIDR-220ENST00000522900 WNT3P56703 355 aa17.06■□□□□ 0.32
SPIDR-220ENST00000522900 KRTAP10-9P60411 292 aa17.06■□□□□ 0.32
SPIDR-220ENST00000522900 ERCC6LQ2NKX8 1250 aa17.06■□□□□ 0.32
SPIDR-220ENST00000522900 SLC30A6Q6NXT4 461 aa17.06■□□□□ 0.32
SPIDR-220ENST00000522900 TMEM81Q6P7N7 255 aa17.06■□□□□ 0.32
SPIDR-220ENST00000522900 Q6ZSR9 355 aa17.06■□□□□ 0.32
SPIDR-220ENST00000522900 YRDCQ86U90 279 aaKnown RBP17.06■□□□□ 0.32
SPIDR-220ENST00000522900 WDSUB1Q8N9V3 476 aa17.06■□□□□ 0.32
SPIDR-220ENST00000522900 FAM76AQ8TAV0 307 aa17.06■□□□□ 0.32
SPIDR-220ENST00000522900 AENQ8WTP8 325 aaKnown RBP17.06■□□□□ 0.32
SPIDR-220ENST00000522900 APOPT1Q96IL0 206 aa17.06■□□□□ 0.32
SPIDR-220ENST00000522900 COL21A1Q96P44 957 aa17.06■□□□□ 0.32
SPIDR-220ENST00000522900 ADOQ96SZ5 270 aa17.06■□□□□ 0.32
SPIDR-220ENST00000522900 MECRQ9BV79 373 aa17.06■□□□□ 0.32
SPIDR-220ENST00000522900 OSBPL11Q9BXB4 747 aa17.06■□□□□ 0.32
SPIDR-220ENST00000522900 GLIPR2Q9H4G4 154 aa17.06■□□□□ 0.32
SPIDR-220ENST00000522900 MKS1Q9NXB0 559 aa17.06■□□□□ 0.32
SPIDR-220ENST00000522900 MAPRE3Q9UPY8 281 aa17.06■□□□□ 0.32
SPIDR-220ENST00000522900 OR6C70A6NIJ9 312 aa17.05■□□□□ 0.32
SPIDR-220ENST00000522900 AZIN1O14977 448 aa17.05■□□□□ 0.32
SPIDR-220ENST00000522900 TSPAN2O60636 221 aa17.05■□□□□ 0.32
SPIDR-220ENST00000522900 SPAG7O75391 227 aa17.05■□□□□ 0.32
SPIDR-220ENST00000522900 ERN1O75460 977 aaKnown RBP17.05■□□□□ 0.32
SPIDR-220ENST00000522900 CHRNGP07510 517 aa17.05■□□□□ 0.32
SPIDR-220ENST00000522900 HOXD4P09016 255 aaPredicted RBP17.05■□□□□ 0.32
SPIDR-220ENST00000522900 LINC00032P0C843 101 aa17.05■□□□□ 0.32
SPIDR-220ENST00000522900 CREB1P16220 341 aa17.05■□□□□ 0.32
SPIDR-220ENST00000522900 BMP7P18075 431 aa17.05■□□□□ 0.32
SPIDR-220ENST00000522900 MC3RP41968 323 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms