RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 LINC01553A4QN01 128 aa15.41■□□□□ 0.06
PCDHA3-201ENST00000522353 A6NL46 340 aa15.41■□□□□ 0.06
PCDHA3-201ENST00000522353 ETFAP13804 333 aa15.41■□□□□ 0.06
PCDHA3-201ENST00000522353 TANGO2Q6ICL3 276 aa15.41■□□□□ 0.06
PCDHA3-201ENST00000522353 METTL25Q8N6Q8 603 aa15.41■□□□□ 0.06
PCDHA3-201ENST00000522353 DNAJA3Q96EY1 480 aa15.41■□□□□ 0.06
PCDHA3-201ENST00000522353 MAGIXQ9H6Y5 334 aa15.41■□□□□ 0.06
PCDHA3-201ENST00000522353 PNMTP11086 282 aa15.41■□□□□ 0.06
PCDHA3-201ENST00000522353 FRKP42685 505 aaPredicted RBP15.41■□□□□ 0.06
PCDHA3-201ENST00000522353 SH3BP2P78314 561 aa15.41■□□□□ 0.06
PCDHA3-201ENST00000522353 TGFBR3Q03167 851 aa15.41■□□□□ 0.06
PCDHA3-201ENST00000522353 TLE3Q04726 772 aa15.41■□□□□ 0.06
PCDHA3-201ENST00000522353 IER5LQ5T953 404 aa15.41■□□□□ 0.06
PCDHA3-201ENST00000522353 LRRN1Q6UXK5 716 aa15.41■□□□□ 0.06
PCDHA3-201ENST00000522353 ZNF517Q6ZMY9 492 aaPredicted RBP15.41■□□□□ 0.06
PCDHA3-201ENST00000522353 CDHR3Q6ZTQ4 885 aa15.41■□□□□ 0.06
PCDHA3-201ENST00000522353 LAS2Q8IYD9 372 aa15.41■□□□□ 0.06
PCDHA3-201ENST00000522353 OR8S1Q8NH09 359 aa15.41■□□□□ 0.06
PCDHA3-201ENST00000522353 ABHD5Q8WTS1 349 aa15.41■□□□□ 0.06
PCDHA3-201ENST00000522353 ZBP1Q9H171 429 aa15.41■□□□□ 0.06
PCDHA3-201ENST00000522353 IRF2BPLQ9H1B7 796 aa15.41■□□□□ 0.06
PCDHA3-201ENST00000522353 KCNIP3Q9Y2W7 256 aa15.41■□□□□ 0.06
PCDHA3-201ENST00000522353 PCDHGA6Q9Y5G7 932 aa15.41■□□□□ 0.06
PCDHA3-201ENST00000522353 GRXCR2A6NFK2 248 aa15.41■□□□□ 0.06
PCDHA3-201ENST00000522353 SLC19A2O60779 497 aa15.41■□□□□ 0.06
PCDHA3-201ENST00000522353 TMED4Q7Z7H5 227 aa15.41■□□□□ 0.06
PCDHA3-201ENST00000522353 EID2Q8N6I1 236 aa15.41■□□□□ 0.06
PCDHA3-201ENST00000522353 ENDOVQ8N8Q3 282 aaKnown RBP15.41■□□□□ 0.06
PCDHA3-201ENST00000522353 METTL2AQ96IZ6 378 aaKnown RBP15.41■□□□□ 0.06
PCDHA3-201ENST00000522353 CNN2Q99439 309 aaKnown RBP15.41■□□□□ 0.06
PCDHA3-201ENST00000522353 DPH2Q9BQC3 489 aaPredicted RBP15.41■□□□□ 0.06
PCDHA3-201ENST00000522353 ENAMQ9NRM1 1142 aa15.41■□□□□ 0.06
PCDHA3-201ENST00000522353 OBP2AQ9NY56 170 aa15.41■□□□□ 0.06
PCDHA3-201ENST00000522353 A0A1B0GTW7 788 aa15.41■□□□□ 0.06
PCDHA3-201ENST00000522353 SLC33A1O00400 549 aaPredicted RBP15.41■□□□□ 0.06
PCDHA3-201ENST00000522353 AQP9O43315 295 aa15.41■□□□□ 0.06
PCDHA3-201ENST00000522353 SNAPC5O75971 98 aa15.41■□□□□ 0.06
PCDHA3-201ENST00000522353 SCGB1D2O95969 90 aa15.41■□□□□ 0.06
PCDHA3-201ENST00000522353 MMP2P08253 660 aa15.41■□□□□ 0.06
PCDHA3-201ENST00000522353 UBL4AP11441 157 aa15.41■□□□□ 0.06
PCDHA3-201ENST00000522353 HOXD9P28356 352 aaPredicted RBP15.41■□□□□ 0.06
PCDHA3-201ENST00000522353 PYCR1P32322 319 aa15.41■□□□□ 0.06
PCDHA3-201ENST00000522353 SLC18B1Q6NT16 456 aa15.41■□□□□ 0.06
PCDHA3-201ENST00000522353 ACBD7Q8N6N7 88 aa15.41■□□□□ 0.06
PCDHA3-201ENST00000522353 SPPL3Q8TCT6 385 aa15.41■□□□□ 0.06
PCDHA3-201ENST00000522353 ATOH1Q92858 354 aaPredicted RBP15.41■□□□□ 0.06
PCDHA3-201ENST00000522353 NUDT15Q9NV35 164 aa15.41■□□□□ 0.06
PCDHA3-201ENST00000522353 SH2B3Q9UQQ2 575 aa15.41■□□□□ 0.06
PCDHA3-201ENST00000522353 NOP16Q9Y3C1 178 aaKnown RBP15.41■□□□□ 0.06
PCDHA3-201ENST00000522353 SPEF1Q9Y4P9 236 aa15.41■□□□□ 0.06
PCDHA3-201ENST00000522353 PTGDR2Q9Y5Y4 395 aa15.41■□□□□ 0.06
PCDHA3-201ENST00000522353 NSG1A0A0A6YYJ2 146 aa15.4■□□□□ 0.06
PCDHA3-201ENST00000522353 LRRN3E7EW58 273 aa15.4■□□□□ 0.06
PCDHA3-201ENST00000522353 SCGB2A1O75556 95 aa15.4■□□□□ 0.06
PCDHA3-201ENST00000522353 YES1P07947 543 aa15.4■□□□□ 0.06
PCDHA3-201ENST00000522353 AP2S1P53680 142 aaPredicted RBP15.4■□□□□ 0.06
PCDHA3-201ENST00000522353 PRAMEF8Q5VWM4 474 aa15.4■□□□□ 0.06
PCDHA3-201ENST00000522353 PRAMEF7Q5VXH5 474 aa15.4■□□□□ 0.06
PCDHA3-201ENST00000522353 SSX6Q7RTT6 188 aa15.4■□□□□ 0.06
PCDHA3-201ENST00000522353 HMGN2P46Q86SG4 172 aa15.4■□□□□ 0.06
PCDHA3-201ENST00000522353 CLECL1Q8IZS7 167 aa15.4■□□□□ 0.06
PCDHA3-201ENST00000522353 NLGN4YQ8NFZ3 816 aaPredicted RBP15.4■□□□□ 0.06
PCDHA3-201ENST00000522353 C12orf43Q96C57 262 aaKnown RBP15.4■□□□□ 0.06
PCDHA3-201ENST00000522353 RTP3Q9BQQ7 232 aa15.4■□□□□ 0.06
PCDHA3-201ENST00000522353 LRRN3Q9H3W5 708 aa15.4■□□□□ 0.06
PCDHA3-201ENST00000522353 DMRT3Q9NQL9 472 aa15.4■□□□□ 0.06
PCDHA3-201ENST00000522353 TAAR2Q9P1P5 351 aa15.4■□□□□ 0.06
PCDHA3-201ENST00000522353 ALG5Q9Y673 324 aa15.4■□□□□ 0.06
PCDHA3-201ENST00000522353 ICAM2P13598 275 aa15.4■□□□□ 0.06
PCDHA3-201ENST00000522353 RBMXP38159 391 aaKnown RBP15.4■□□□□ 0.06
PCDHA3-201ENST00000522353 MAB21L1Q13394 359 aa15.4■□□□□ 0.06
PCDHA3-201ENST00000522353 CHRFAM7AQ494W8 412 aa15.4■□□□□ 0.06
PCDHA3-201ENST00000522353 TMEM201Q5SNT2 666 aa15.4■□□□□ 0.06
PCDHA3-201ENST00000522353 MTMR10Q9NXD2 777 aa15.4■□□□□ 0.06
PCDHA3-201ENST00000522353 SRPX2O60687 465 aaPredicted RBP15.4■□□□□ 0.06
PCDHA3-201ENST00000522353 DDCP20711 480 aa15.4■□□□□ 0.06
PCDHA3-201ENST00000522353 AFF1P51825 1210 aaKnown RBP15.4■□□□□ 0.06
PCDHA3-201ENST00000522353 AFF3P51826 1226 aaKnown RBP15.4■□□□□ 0.06
PCDHA3-201ENST00000522353 RUNDC3AQ59EK9 446 aa15.4■□□□□ 0.06
PCDHA3-201ENST00000522353 OPN5Q6U736 354 aa15.4■□□□□ 0.06
PCDHA3-201ENST00000522353 ABHD12BQ7Z5M8 362 aaPredicted RBP15.4■□□□□ 0.06
PCDHA3-201ENST00000522353 OR8H3Q8N146 312 aa15.4■□□□□ 0.06
PCDHA3-201ENST00000522353 TMEM130Q8N3G9 435 aa15.4■□□□□ 0.06
PCDHA3-201ENST00000522353 ARL14Q8N4G2 192 aa15.4■□□□□ 0.06
PCDHA3-201ENST00000522353 ACOT4Q8N9L9 421 aa15.4■□□□□ 0.06
PCDHA3-201ENST00000522353 MDGA1Q8NFP4 955 aa15.4■□□□□ 0.06
PCDHA3-201ENST00000522353 APIPQ96GX9 242 aa15.4■□□□□ 0.06
PCDHA3-201ENST00000522353 MMP27Q9H306 513 aa15.4■□□□□ 0.06
PCDHA3-201ENST00000522353 TMEM45AQ9NWC5 275 aa15.4■□□□□ 0.06
PCDHA3-201ENST00000522353 PIGBOS1A0A0B4J2F0 54 aa15.4■□□□□ 0.06
PCDHA3-201ENST00000522353 E2F3O00716 465 aa15.4■□□□□ 0.06
PCDHA3-201ENST00000522353 JRKO75564 520 aa15.4■□□□□ 0.06
PCDHA3-201ENST00000522353 OR7A10O76100 309 aa15.4■□□□□ 0.06
PCDHA3-201ENST00000522353 RASAL1O95294 804 aa15.4■□□□□ 0.06
PCDHA3-201ENST00000522353 ADAP00813 363 aa15.4■□□□□ 0.06
PCDHA3-201ENST00000522353 HOXA9P31269 272 aa15.4■□□□□ 0.06
PCDHA3-201ENST00000522353 CTXN1P60606 82 aa15.4■□□□□ 0.06
PCDHA3-201ENST00000522353 E2F1Q01094 437 aa15.4■□□□□ 0.06
PCDHA3-201ENST00000522353 MOGSQ13724 837 aa15.4■□□□□ 0.06
PCDHA3-201ENST00000522353 MSLNLQ96KJ4 702 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms