RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 PRTFDC1Q9NRG1 225 aa13.11□□□□□ -0.31
SYNPO-205ENST00000522122 ALG5Q9Y673 324 aa13.11□□□□□ -0.31
SYNPO-205ENST00000522122 A0A1W2PQU0 124 aa13.11□□□□□ -0.31
SYNPO-205ENST00000522122 CSF2RAP15509 400 aa13.11□□□□□ -0.31
SYNPO-205ENST00000522122 DNASE1P24855 282 aa13.11□□□□□ -0.31
SYNPO-205ENST00000522122 E2F1Q01094 437 aa13.11□□□□□ -0.31
SYNPO-205ENST00000522122 PIN1Q13526 163 aaPredicted RBP13.11□□□□□ -0.31
SYNPO-205ENST00000522122 ARMCX6Q7L4S7 300 aa13.11□□□□□ -0.31
SYNPO-205ENST00000522122 AMIGO1Q86WK6 493 aa13.11□□□□□ -0.31
SYNPO-205ENST00000522122 GDPD1Q8N9F7 314 aa13.11□□□□□ -0.31
SYNPO-205ENST00000522122 OR56A3Q8NH54 315 aa13.11□□□□□ -0.31
SYNPO-205ENST00000522122 WDR92Q96MX6 357 aa13.11□□□□□ -0.31
SYNPO-205ENST00000522122 RBP7Q96R05 134 aa13.11□□□□□ -0.31
SYNPO-205ENST00000522122 RBCK1Q9BYM8 510 aa13.11□□□□□ -0.31
SYNPO-205ENST00000522122 C5AR2Q9P296 337 aa13.11□□□□□ -0.31
SYNPO-205ENST00000522122 A0A1W2PQL4 384 aaPredicted RBP13.11□□□□□ -0.31
SYNPO-205ENST00000522122 GXYLT2A0PJZ3 443 aa13.11□□□□□ -0.31
SYNPO-205ENST00000522122 SOX1O00570 391 aaPredicted RBP13.11□□□□□ -0.31
SYNPO-205ENST00000522122 TGM5O43548 720 aa13.11□□□□□ -0.31
SYNPO-205ENST00000522122 AK1P00568 194 aa13.11□□□□□ -0.31
SYNPO-205ENST00000522122 UGT2B10P36537 528 aa13.11□□□□□ -0.31
SYNPO-205ENST00000522122 ABCA11PQ4W5N1 156 aa13.11□□□□□ -0.31
SYNPO-205ENST00000522122 MLIPQ5VWP3 458 aa13.11□□□□□ -0.31
SYNPO-205ENST00000522122 PLAG1Q6DJT9 500 aa13.11□□□□□ -0.31
SYNPO-205ENST00000522122 NADSYN1Q6IA69 706 aa13.11□□□□□ -0.31
SYNPO-205ENST00000522122 C12orf40Q86WS4 652 aa13.11□□□□□ -0.31
SYNPO-205ENST00000522122 IQCF1Q8N6M8 205 aa13.11□□□□□ -0.31
SYNPO-205ENST00000522122 FAM86B1Q8N7N1 296 aa13.11□□□□□ -0.31
SYNPO-205ENST00000522122 DTX3Q8N9I9 347 aa13.11□□□□□ -0.31
SYNPO-205ENST00000522122 RAD9AQ99638 391 aa13.11□□□□□ -0.31
SYNPO-205ENST00000522122 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.11□□□□□ -0.31
SYNPO-205ENST00000522122 NLKQ9UBE8 527 aa13.11□□□□□ -0.31
SYNPO-205ENST00000522122 GPR52Q9Y2T5 361 aa13.11□□□□□ -0.31
SYNPO-205ENST00000522122 FXYD1O00168 92 aa13.11□□□□□ -0.31
SYNPO-205ENST00000522122 ERP29P30040 261 aaKnown RBP13.11□□□□□ -0.31
SYNPO-205ENST00000522122 CA5AP35218 305 aa13.11□□□□□ -0.31
SYNPO-205ENST00000522122 NKX2-5P52952 324 aaPredicted RBP13.11□□□□□ -0.31
SYNPO-205ENST00000522122 CEBPGP53567 150 aa13.11□□□□□ -0.31
SYNPO-205ENST00000522122 NTRK2Q16620 822 aa13.11□□□□□ -0.31
SYNPO-205ENST00000522122 ARHGAP40Q5TG30 622 aa13.11□□□□□ -0.31
SYNPO-205ENST00000522122 LNX2Q8N448 690 aa13.11□□□□□ -0.31
SYNPO-205ENST00000522122 THAP4Q8WY91 577 aa13.11□□□□□ -0.31
SYNPO-205ENST00000522122 ACTR6Q9GZN1 396 aa13.11□□□□□ -0.31
SYNPO-205ENST00000522122 SH2B3Q9UQQ2 575 aa13.11□□□□□ -0.31
SYNPO-205ENST00000522122 TRBV2A0A0J9YWF9 115 aa13.1□□□□□ -0.31
SYNPO-205ENST00000522122 ZNF878C9JN71 531 aa13.1□□□□□ -0.31
SYNPO-205ENST00000522122 KLK8O60259 260 aa13.1□□□□□ -0.31
SYNPO-205ENST00000522122 IFNA21P01568 189 aa13.1□□□□□ -0.31
SYNPO-205ENST00000522122 CCR7P32248 378 aa13.1□□□□□ -0.31
SYNPO-205ENST00000522122 CHAF1BQ13112 559 aa13.1□□□□□ -0.31
SYNPO-205ENST00000522122 OXA1LQ15070 435 aa13.1□□□□□ -0.31
SYNPO-205ENST00000522122 GGTA1PQ4G0N0 100 aa13.1□□□□□ -0.31
SYNPO-205ENST00000522122 SYT6Q5T7P8 510 aaPredicted RBP13.1□□□□□ -0.31
SYNPO-205ENST00000522122 KCTD18Q6PI47 426 aaPredicted RBP13.1□□□□□ -0.31
SYNPO-205ENST00000522122 TIGD4Q8IY51 512 aa13.1□□□□□ -0.31
SYNPO-205ENST00000522122 SETD6Q8TBK2 473 aa13.1□□□□□ -0.31
SYNPO-205ENST00000522122 NEIL2Q969S2 332 aa13.1□□□□□ -0.31
SYNPO-205ENST00000522122 CLCC1Q96S66 551 aa13.1□□□□□ -0.31
SYNPO-205ENST00000522122 FOLH1BQ9HBA9 442 aa13.1□□□□□ -0.31
SYNPO-205ENST00000522122 PRSS21Q9Y6M0 314 aa13.1□□□□□ -0.31
SYNPO-205ENST00000522122 KIAA1217Q5T5P2 1943 aa13.1□□□□□ -0.31
SYNPO-205ENST00000522122 ZSCAN5BA6NJL1 495 aa13.1□□□□□ -0.31
SYNPO-205ENST00000522122 GABRR3A8MPY1 467 aa13.1□□□□□ -0.31
SYNPO-205ENST00000522122 NR2C1P13056 603 aa13.1□□□□□ -0.31
SYNPO-205ENST00000522122 AK4P27144 223 aaPredicted RBP13.1□□□□□ -0.31
SYNPO-205ENST00000522122 GPR143P51810 404 aa13.1□□□□□ -0.31
SYNPO-205ENST00000522122 RPS15AP62244 130 aaKnown RBP13.1□□□□□ -0.31
SYNPO-205ENST00000522122 CRYZQ08257 329 aaKnown RBP13.1□□□□□ -0.31
SYNPO-205ENST00000522122 POU4F2Q12837 409 aa13.1□□□□□ -0.31
SYNPO-205ENST00000522122 ZNF791Q3KP31 576 aaPredicted RBP13.1□□□□□ -0.31
SYNPO-205ENST00000522122 LRIT3Q3SXY7 679 aa13.1□□□□□ -0.31
SYNPO-205ENST00000522122 GLT8D1Q68CQ7 371 aa13.1□□□□□ -0.31
SYNPO-205ENST00000522122 ULK3Q6PHR2 472 aa13.1□□□□□ -0.31
SYNPO-205ENST00000522122 FAM46AQ96IP4 442 aaKnown RBP13.1□□□□□ -0.31
SYNPO-205ENST00000522122 OR4K3Q96R72 315 aa13.1□□□□□ -0.31
SYNPO-205ENST00000522122 KLF16Q9BXK1 252 aaPredicted RBP13.1□□□□□ -0.31
SYNPO-205ENST00000522122 CACNG6Q9BXT2 260 aa13.1□□□□□ -0.31
SYNPO-205ENST00000522122 GABARAPL1Q9H0R8 117 aa13.1□□□□□ -0.31
SYNPO-205ENST00000522122 CLDND1Q9NY35 253 aa13.1□□□□□ -0.31
SYNPO-205ENST00000522122 LTBP1Q14766 1721 aa13.1□□□□□ -0.31
SYNPO-205ENST00000522122 LOC100509620A0A075B734 347 aa13.1□□□□□ -0.31
SYNPO-205ENST00000522122 EIF1AXP47813 144 aaKnown RBP13.1□□□□□ -0.31
SYNPO-205ENST00000522122 MRPL19P49406 292 aaKnown RBP13.1□□□□□ -0.31
SYNPO-205ENST00000522122 GAS6Q14393 721 aa13.1□□□□□ -0.31
SYNPO-205ENST00000522122 TMEM69Q5SWH9 247 aa13.1□□□□□ -0.31
SYNPO-205ENST00000522122 NRMQ8IXM6 262 aa13.1□□□□□ -0.31
SYNPO-205ENST00000522122 MMABQ96EY8 250 aaPredicted RBP13.1□□□□□ -0.31
SYNPO-205ENST00000522122 OR51E2Q9H255 320 aa13.1□□□□□ -0.31
SYNPO-205ENST00000522122 MTHFD2LQ9H903 347 aaPredicted RBP13.1□□□□□ -0.31
SYNPO-205ENST00000522122 FARSAQ9Y285 508 aaKnown RBP13.1□□□□□ -0.31
SYNPO-205ENST00000522122 RGS9O75916 674 aaPredicted RBP13.1□□□□□ -0.31
SYNPO-205ENST00000522122 SLC10A3P09131 477 aa13.1□□□□□ -0.31
SYNPO-205ENST00000522122 WNT4P56705 351 aa13.1□□□□□ -0.31
SYNPO-205ENST00000522122 USP51Q70EK9 711 aa13.1□□□□□ -0.31
SYNPO-205ENST00000522122 PHC2Q8IXK0 858 aa13.1□□□□□ -0.31
SYNPO-205ENST00000522122 ANKK1Q8NFD2 765 aa13.1□□□□□ -0.31
SYNPO-205ENST00000522122 JPH3Q8WXH2 748 aaPredicted RBP13.1□□□□□ -0.31
SYNPO-205ENST00000522122 CIDECQ96AQ7 238 aaPredicted RBP13.1□□□□□ -0.31
SYNPO-205ENST00000522122 TMEM184CQ9NVA4 438 aa13.1□□□□□ -0.31
SYNPO-205ENST00000522122 TMEM14AQ9Y6G1 99 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms