RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 PRAMEF4O60810 478 aa7.89□□□□□ -1.15
TRAPPC9-212ENST00000521944 PRKRAO75569 313 aaKnown RBP7.89□□□□□ -1.15
TRAPPC9-212ENST00000521944 CBR3O75828 277 aa7.89□□□□□ -1.15
TRAPPC9-212ENST00000521944 TJP3O95049 919 aa7.89□□□□□ -1.15
TRAPPC9-212ENST00000521944 SERPINC1P01008 464 aa7.89□□□□□ -1.15
TRAPPC9-212ENST00000521944 TGFB1P01137 390 aa7.89□□□□□ -1.15
TRAPPC9-212ENST00000521944 C8GP07360 202 aa7.89□□□□□ -1.15
TRAPPC9-212ENST00000521944 APRTP07741 180 aa7.89□□□□□ -1.15
TRAPPC9-212ENST00000521944 CREB1P16220 341 aa7.89□□□□□ -1.15
TRAPPC9-212ENST00000521944 PSMB1P20618 241 aaKnown RBP7.89□□□□□ -1.15
TRAPPC9-212ENST00000521944 TCEA1P23193 301 aaKnown RBP7.89□□□□□ -1.15
TRAPPC9-212ENST00000521944 SLC6A8P48029 635 aa7.89□□□□□ -1.15
TRAPPC9-212ENST00000521944 PGGT1BP53609 377 aa7.89□□□□□ -1.15
TRAPPC9-212ENST00000521944 KLF1Q13351 362 aaPredicted RBP7.89□□□□□ -1.15
TRAPPC9-212ENST00000521944 ZNF267Q14586 743 aaPredicted RBP7.89□□□□□ -1.15
TRAPPC9-212ENST00000521944 TSC22D1Q15714 1073 aa7.89□□□□□ -1.15
TRAPPC9-212ENST00000521944 TAB1Q15750 504 aa7.89□□□□□ -1.15
TRAPPC9-212ENST00000521944 PRAMEF9Q5VWM5 478 aa7.89□□□□□ -1.15
TRAPPC9-212ENST00000521944 TMEM81Q6P7N7 255 aa7.89□□□□□ -1.15
TRAPPC9-212ENST00000521944 SASS6Q6UVJ0 657 aa7.89□□□□□ -1.15
TRAPPC9-212ENST00000521944 RNF111Q6ZNA4 994 aa7.89□□□□□ -1.15
TRAPPC9-212ENST00000521944 SLC29A4Q7RTT9 530 aa7.89□□□□□ -1.15
TRAPPC9-212ENST00000521944 TMPRSS11BQ86T26 416 aa7.89□□□□□ -1.15
TRAPPC9-212ENST00000521944 TAGAPQ8N103 731 aa7.89□□□□□ -1.15
TRAPPC9-212ENST00000521944 FAM216AQ8WUB2 273 aa7.89□□□□□ -1.15
TRAPPC9-212ENST00000521944 FBXL8Q96CD0 374 aa7.89□□□□□ -1.15
TRAPPC9-212ENST00000521944 DGAT2Q96PD7 388 aa7.89□□□□□ -1.15
TRAPPC9-212ENST00000521944 HBEGFQ99075 208 aa7.89□□□□□ -1.15
TRAPPC9-212ENST00000521944 DNAJC7Q99615 494 aa7.89□□□□□ -1.15
TRAPPC9-212ENST00000521944 ZNF747Q9BV97 191 aa7.89□□□□□ -1.15
TRAPPC9-212ENST00000521944 REXO4Q9GZR2 422 aaKnown RBP7.89□□□□□ -1.15
TRAPPC9-212ENST00000521944 OR10A4Q9H209 315 aa7.89□□□□□ -1.15
TRAPPC9-212ENST00000521944 FBXO6Q9NRD1 293 aaPredicted RBP7.89□□□□□ -1.15
TRAPPC9-212ENST00000521944 INTS10Q9NVR2 710 aaKnown RBP7.89□□□□□ -1.15
TRAPPC9-212ENST00000521944 SYBUQ9NX95 663 aa7.89□□□□□ -1.15
TRAPPC9-212ENST00000521944 ARL15Q9NXU5 204 aa7.89□□□□□ -1.15
TRAPPC9-212ENST00000521944 MOCS1Q9NZB8 636 aa7.89□□□□□ -1.15
TRAPPC9-212ENST00000521944 PTBP2Q9UKA9 531 aaKnown RBP7.89□□□□□ -1.15
TRAPPC9-212ENST00000521944 SLC22A14Q9Y267 594 aa7.89□□□□□ -1.15
TRAPPC9-212ENST00000521944 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.89□□□□□ -1.15
TRAPPC9-212ENST00000521944 EPN1Q9Y6I3 576 aaPredicted RBP7.89□□□□□ -1.15
TRAPPC9-212ENST00000521944 C2orf92A0A1B0GVN3 265 aa7.88□□□□□ -1.15
TRAPPC9-212ENST00000521944 A0A1W2PS29 197 aa7.88□□□□□ -1.15
TRAPPC9-212ENST00000521944 RTCAO00442 366 aaKnown RBP7.88□□□□□ -1.15
TRAPPC9-212ENST00000521944 GCM2O75603 506 aaPredicted RBP7.88□□□□□ -1.15
TRAPPC9-212ENST00000521944 COX7A2P14406 83 aa7.88□□□□□ -1.15
TRAPPC9-212ENST00000521944 IL11P20809 199 aa7.88□□□□□ -1.15
TRAPPC9-212ENST00000521944 ATP5A1P25705 553 aaKnown RBP7.88□□□□□ -1.15
TRAPPC9-212ENST00000521944 MGAT1P26572 445 aa7.88□□□□□ -1.15
TRAPPC9-212ENST00000521944 ABCD3P28288 659 aa7.88□□□□□ -1.15
TRAPPC9-212ENST00000521944 SRD5A2P31213 254 aa7.88□□□□□ -1.15
TRAPPC9-212ENST00000521944 SSTR4P31391 388 aa7.88□□□□□ -1.15
TRAPPC9-212ENST00000521944 FDFT1P37268 417 aa7.88□□□□□ -1.15
TRAPPC9-212ENST00000521944 SP140Q13342 867 aa7.88□□□□□ -1.15
TRAPPC9-212ENST00000521944 GGTLC2Q14390 218 aa7.88□□□□□ -1.15
TRAPPC9-212ENST00000521944 PON3Q15166 354 aa7.88□□□□□ -1.15
TRAPPC9-212ENST00000521944 KCTD19Q17RG1 926 aaPredicted RBP7.88□□□□□ -1.15
TRAPPC9-212ENST00000521944 C11orf63Q6NUN7 778 aa7.88□□□□□ -1.15
TRAPPC9-212ENST00000521944 AAGABQ6PD74 315 aa7.88□□□□□ -1.15
TRAPPC9-212ENST00000521944 PAQR3Q6TCH7 311 aa7.88□□□□□ -1.15
TRAPPC9-212ENST00000521944 THOC6Q86W42 341 aaKnown RBP7.88□□□□□ -1.15
TRAPPC9-212ENST00000521944 UBQLNLQ8IYU4 475 aa7.88□□□□□ -1.15
TRAPPC9-212ENST00000521944 ZNF615Q8N8J6 731 aa7.88□□□□□ -1.15
TRAPPC9-212ENST00000521944 BBOF1Q8ND07 529 aa7.88□□□□□ -1.15
TRAPPC9-212ENST00000521944 RNF214Q8ND24 703 aa7.88□□□□□ -1.15
TRAPPC9-212ENST00000521944 PIWIL2Q8TC59 973 aaKnown RBP7.88□□□□□ -1.15
TRAPPC9-212ENST00000521944 ATG4AQ8WYN0 398 aa7.88□□□□□ -1.15
TRAPPC9-212ENST00000521944 RHBDF1Q96CC6 855 aa7.88□□□□□ -1.15
TRAPPC9-212ENST00000521944 RBM18Q96H35 190 aaKnown RBP7.88□□□□□ -1.15
TRAPPC9-212ENST00000521944 ADAD1Q96M93 576 aaKnown RBP7.88□□□□□ -1.15
TRAPPC9-212ENST00000521944 SFXN2Q96NB2 322 aa7.88□□□□□ -1.15
TRAPPC9-212ENST00000521944 F2RL3Q96RI0 385 aa7.88□□□□□ -1.15
TRAPPC9-212ENST00000521944 PINK1Q9BXM7 581 aa7.88□□□□□ -1.15
TRAPPC9-212ENST00000521944 IL22Q9GZX6 179 aa7.88□□□□□ -1.15
TRAPPC9-212ENST00000521944 METTL7AQ9H8H3 244 aa7.88□□□□□ -1.15
TRAPPC9-212ENST00000521944 ACTR8Q9H981 624 aa7.88□□□□□ -1.15
TRAPPC9-212ENST00000521944 NHEJ1Q9H9Q4 299 aaPredicted RBP7.88□□□□□ -1.15
TRAPPC9-212ENST00000521944 SSU72Q9NP77 194 aaKnown RBP7.88□□□□□ -1.15
TRAPPC9-212ENST00000521944 SNX15Q9NRS6 342 aa7.88□□□□□ -1.15
TRAPPC9-212ENST00000521944 LMBRD1Q9NUN5 540 aa7.88□□□□□ -1.15
TRAPPC9-212ENST00000521944 ZNF490Q9ULM2 529 aaPredicted RBP7.88□□□□□ -1.15
TRAPPC9-212ENST00000521944 CLEC4AQ9UMR7 237 aa7.88□□□□□ -1.15
TRAPPC9-212ENST00000521944 GPR52Q9Y2T5 361 aa7.88□□□□□ -1.15
TRAPPC9-212ENST00000521944 OR6C76A6NM76 312 aa7.87□□□□□ -1.15
TRAPPC9-212ENST00000521944 CAPN14A8MX76 684 aa7.87□□□□□ -1.15
TRAPPC9-212ENST00000521944 E7EQL1 145 aa7.87□□□□□ -1.15
TRAPPC9-212ENST00000521944 CLEC3AO75596 197 aa7.87□□□□□ -1.15
TRAPPC9-212ENST00000521944 ZNF189O75820 626 aaPredicted RBP7.87□□□□□ -1.15
TRAPPC9-212ENST00000521944 HAUS5O94927 633 aa7.87□□□□□ -1.15
TRAPPC9-212ENST00000521944 NTN1O95631 604 aa7.87□□□□□ -1.15
TRAPPC9-212ENST00000521944 GUCA1CO95843 209 aa7.87□□□□□ -1.15
TRAPPC9-212ENST00000521944 F13BP05160 661 aa7.87□□□□□ -1.15
TRAPPC9-212ENST00000521944 RHOXF2BP0C7M4 288 aa7.87□□□□□ -1.15
TRAPPC9-212ENST00000521944 ZSCAN5DPP0CG00 497 aa7.87□□□□□ -1.15
TRAPPC9-212ENST00000521944 CNTFP26441 200 aa7.87□□□□□ -1.15
TRAPPC9-212ENST00000521944 GCKP35557 465 aa7.87□□□□□ -1.15
TRAPPC9-212ENST00000521944 RBMXP38159 391 aaKnown RBP7.87□□□□□ -1.15
TRAPPC9-212ENST00000521944 NR4A2P43354 598 aa7.87□□□□□ -1.15
TRAPPC9-212ENST00000521944 CLDN20P56880 219 aa7.87□□□□□ -1.15
TRAPPC9-212ENST00000521944 DOC2AQ14183 400 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms