RNA–Protein interactions for RNA: ENST00000521233.1

HDAC2-211, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 733 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-211ENST00000521233 TP53I11O14683 189 aa11.55□□□□□ -0.56
HDAC2-211ENST00000521233 TO15178 435 aa11.55□□□□□ -0.56
HDAC2-211ENST00000521233 SORBS2O94875 1100 aaKnown RBP11.55□□□□□ -0.56
HDAC2-211ENST00000521233 SOX30O94993 753 aa11.55□□□□□ -0.56
HDAC2-211ENST00000521233 OR6B1O95007 311 aa11.55□□□□□ -0.56
HDAC2-211ENST00000521233 NADKO95544 446 aaPredicted RBP11.55□□□□□ -0.56
HDAC2-211ENST00000521233 F10P00742 488 aa11.55□□□□□ -0.56
HDAC2-211ENST00000521233 NAGAP17050 411 aa11.55□□□□□ -0.56
HDAC2-211ENST00000521233 EFNA1P20827 205 aaPredicted RBP11.55□□□□□ -0.56
HDAC2-211ENST00000521233 KRT20P35900 424 aa11.55□□□□□ -0.56
HDAC2-211ENST00000521233 PRIM2P49643 509 aa11.55□□□□□ -0.56
HDAC2-211ENST00000521233 POLR2JP52435 117 aaKnown RBP11.55□□□□□ -0.56
HDAC2-211ENST00000521233 ARFIP2P53365 341 aa11.55□□□□□ -0.56
HDAC2-211ENST00000521233 MRPS22P82650 360 aaKnown RBP11.55□□□□□ -0.56
HDAC2-211ENST00000521233 PLCXD2Q0VAA5 305 aa11.55□□□□□ -0.56
HDAC2-211ENST00000521233 MAPKAPK3Q16644 382 aa11.55□□□□□ -0.56
HDAC2-211ENST00000521233 RPUSD3Q6P087 351 aaKnown RBP11.55□□□□□ -0.56
HDAC2-211ENST00000521233 ZCCHC12Q6PEW1 402 aa11.55□□□□□ -0.56
HDAC2-211ENST00000521233 SLC34A3Q8N130 599 aa11.55□□□□□ -0.56
HDAC2-211ENST00000521233 TRIML2Q8N7C3 387 aa11.55□□□□□ -0.56
HDAC2-211ENST00000521233 CDRT4Q8N9R6 151 aa11.55□□□□□ -0.56
HDAC2-211ENST00000521233 NUP43Q8NFH3 380 aa11.55□□□□□ -0.56
HDAC2-211ENST00000521233 OR4A15Q8NGL6 344 aa11.55□□□□□ -0.56
HDAC2-211ENST00000521233 FAM120BQ96EK7 910 aaKnown RBP11.55□□□□□ -0.56
HDAC2-211ENST00000521233 MAGED4Q96JG8 741 aa11.55□□□□□ -0.56
HDAC2-211ENST00000521233 CCDC115Q96NT0 180 aa11.55□□□□□ -0.56
HDAC2-211ENST00000521233 OR52E6Q96RD3 313 aa11.55□□□□□ -0.56
HDAC2-211ENST00000521233 NXF5Q9H1B4 397 aaKnown RBP11.55□□□□□ -0.56
HDAC2-211ENST00000521233 RMND5AQ9H871 391 aa11.55□□□□□ -0.56
HDAC2-211ENST00000521233 LIN28AQ9H9Z2 209 aaKnown RBP11.55□□□□□ -0.56
HDAC2-211ENST00000521233 Q9N2J8 555 aa11.55□□□□□ -0.56
HDAC2-211ENST00000521233 SIRT3Q9NTG7 399 aaPredicted RBP11.55□□□□□ -0.56
HDAC2-211ENST00000521233 ANKRD10Q9NXR5 420 aa11.55□□□□□ -0.56
HDAC2-211ENST00000521233 MRTO4Q9UKD2 239 aaKnown RBP11.55□□□□□ -0.56
HDAC2-211ENST00000521233 DTX4Q9Y2E6 619 aa11.55□□□□□ -0.56
HDAC2-211ENST00000521233 GPR55Q9Y2T6 319 aaPredicted RBP11.55□□□□□ -0.56
HDAC2-211ENST00000521233 CSAG2Q9Y5P2 127 aa11.55□□□□□ -0.56
HDAC2-211ENST00000521233 SNX8Q9Y5X2 465 aa11.55□□□□□ -0.56
HDAC2-211ENST00000521233 COPG1Q9Y678 874 aaKnown RBP11.55□□□□□ -0.56
HDAC2-211ENST00000521233 B8ZZF3 427 aa11.54□□□□□ -0.56
HDAC2-211ENST00000521233 NME2P1O60361 137 aa11.54□□□□□ -0.56
HDAC2-211ENST00000521233 NEURL1O76050 574 aa11.54□□□□□ -0.56
HDAC2-211ENST00000521233 ABCB1P08183 1280 aaPredicted RBP11.54□□□□□ -0.56
HDAC2-211ENST00000521233 NCF2P19878 526 aaPredicted RBP11.54□□□□□ -0.56
HDAC2-211ENST00000521233 NME2P22392 152 aa11.54□□□□□ -0.56
HDAC2-211ENST00000521233 IL12AP29459 219 aa11.54□□□□□ -0.56
HDAC2-211ENST00000521233 CCT3P49368 545 aaKnown RBP11.54□□□□□ -0.56
HDAC2-211ENST00000521233 WNT3P56703 355 aa11.54□□□□□ -0.56
HDAC2-211ENST00000521233 KCNK10P57789 538 aa11.54□□□□□ -0.56
HDAC2-211ENST00000521233 HBA1P69905 142 aa11.54□□□□□ -0.56
HDAC2-211ENST00000521233 C19orf57Q0VDD7 668 aa11.54□□□□□ -0.56
HDAC2-211ENST00000521233 TP53BP2Q13625 1128 aa11.54□□□□□ -0.56
HDAC2-211ENST00000521233 RCAN2Q14206 197 aa11.54□□□□□ -0.56
HDAC2-211ENST00000521233 NNATQ16517 81 aa11.54□□□□□ -0.56
HDAC2-211ENST00000521233 NTRK2Q16620 822 aa11.54□□□□□ -0.56
HDAC2-211ENST00000521233 TIGD2Q4W5G0 525 aa11.54□□□□□ -0.56
HDAC2-211ENST00000521233 ZNF468Q5VIY5 522 aaPredicted RBP11.54□□□□□ -0.56
HDAC2-211ENST00000521233 SLC25A25Q6KCM7 469 aa11.54□□□□□ -0.56
HDAC2-211ENST00000521233 MFSD12Q6NUT3 480 aa11.54□□□□□ -0.56
HDAC2-211ENST00000521233 IL20RBQ6UXL0 311 aa11.54□□□□□ -0.56
HDAC2-211ENST00000521233 C16orf47Q6ZP98 133 aaPredicted RBP11.54□□□□□ -0.56
HDAC2-211ENST00000521233 YTHDF3Q7Z739 585 aaKnown RBP11.54□□□□□ -0.56
HDAC2-211ENST00000521233 ZNF843Q8N446 348 aa11.54□□□□□ -0.56
HDAC2-211ENST00000521233 PSD4Q8NDX1 1056 aa11.54□□□□□ -0.56
HDAC2-211ENST00000521233 SIMC1Q8NDZ2 872 aa11.54□□□□□ -0.56
HDAC2-211ENST00000521233 SCMH1Q96GD3 660 aa11.54□□□□□ -0.56
HDAC2-211ENST00000521233 TEX37Q96LM6 180 aa11.54□□□□□ -0.56
HDAC2-211ENST00000521233 SIGLEC12Q96PQ1 595 aa11.54□□□□□ -0.56
HDAC2-211ENST00000521233 CCT8L2Q96SF2 557 aa11.54□□□□□ -0.56
HDAC2-211ENST00000521233 SECISBP2Q96T21 854 aaKnown RBP11.54□□□□□ -0.56
HDAC2-211ENST00000521233 LMF2Q9BU23 707 aaKnown RBP11.54□□□□□ -0.56
HDAC2-211ENST00000521233 CXorf36Q9H7Y0 433 aa11.54□□□□□ -0.56
HDAC2-211ENST00000521233 ANKRA2Q9H9E1 313 aa11.54□□□□□ -0.56
HDAC2-211ENST00000521233 EQTNQ9NQ60 294 aa11.54□□□□□ -0.56
HDAC2-211ENST00000521233 FAF1Q9UNN5 650 aaPredicted RBP11.54□□□□□ -0.56
HDAC2-211ENST00000521233 OR10H1Q9Y4A9 318 aa11.54□□□□□ -0.56
HDAC2-211ENST00000521233 NPFFR2Q9Y5X5 522 aa11.54□□□□□ -0.56
HDAC2-211ENST00000521233 ZNF462Q96JM2 2506 aa11.53□□□□□ -0.56
HDAC2-211ENST00000521233 RNF103-CHMP3A0A140T963 221 aa11.53□□□□□ -0.56
HDAC2-211ENST00000521233 SUV39H1O43463 412 aa11.53□□□□□ -0.56
HDAC2-211ENST00000521233 SCN2BO60939 215 aa11.53□□□□□ -0.56
HDAC2-211ENST00000521233 PPM1BO75688 479 aa11.53□□□□□ -0.56
HDAC2-211ENST00000521233 C1QL1O75973 258 aa11.53□□□□□ -0.56
HDAC2-211ENST00000521233 PRB1P04280 392 aa11.53□□□□□ -0.56
HDAC2-211ENST00000521233 P04436 131 aa11.53□□□□□ -0.56
HDAC2-211ENST00000521233 SP1P08047 785 aa11.53□□□□□ -0.56
HDAC2-211ENST00000521233 ABCD3P28288 659 aa11.53□□□□□ -0.56
HDAC2-211ENST00000521233 IL12BP29460 328 aa11.53□□□□□ -0.56
HDAC2-211ENST00000521233 DGKQP52824 942 aa11.53□□□□□ -0.56
HDAC2-211ENST00000521233 PRKAG1P54619 331 aa11.53□□□□□ -0.56
HDAC2-211ENST00000521233 PSMD4P55036 377 aaKnown RBP11.53□□□□□ -0.56
HDAC2-211ENST00000521233 CORO7P57737 925 aa11.53□□□□□ -0.56
HDAC2-211ENST00000521233 TXNL4AP83876 142 aaKnown RBP11.53□□□□□ -0.56
HDAC2-211ENST00000521233 EFR3AQ14156 821 aa11.53□□□□□ -0.56
HDAC2-211ENST00000521233 ZNF791Q3KP31 576 aaPredicted RBP11.53□□□□□ -0.56
HDAC2-211ENST00000521233 PLEKHN1Q494U1 663 aaPredicted RBP11.53□□□□□ -0.56
HDAC2-211ENST00000521233 CYP27C1Q4G0S4 372 aa11.53□□□□□ -0.56
HDAC2-211ENST00000521233 TBCELQ5QJ74 424 aa11.53□□□□□ -0.56
HDAC2-211ENST00000521233 SPINK14Q6IE38 97 aa11.53□□□□□ -0.56
HDAC2-211ENST00000521233 CGB2Q6NT52 195 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms