RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 PGAM2P15259 253 aa3.88□□□□□ -1.79
SKP1-208ENST00000521216 IDSP22304 550 aa3.88□□□□□ -1.79
SKP1-208ENST00000521216 ACP1P24666 158 aa3.88□□□□□ -1.79
SKP1-208ENST00000521216 PRDX6P30041 224 aa3.88□□□□□ -1.79
SKP1-208ENST00000521216 SFNP31947 248 aa3.88□□□□□ -1.79
SKP1-208ENST00000521216 ANP32AP39687 249 aaKnown RBP3.88□□□□□ -1.79
SKP1-208ENST00000521216 MYBPC1Q00872 1141 aa3.88□□□□□ -1.79
SKP1-208ENST00000521216 ZNF528Q3MIS6 628 aa3.88□□□□□ -1.79
SKP1-208ENST00000521216 PRR5LQ6MZQ0 368 aa3.88□□□□□ -1.79
SKP1-208ENST00000521216 ATRAIDQ6UW56 229 aa3.88□□□□□ -1.79
SKP1-208ENST00000521216 CCBE1Q6UXH8 406 aaPredicted RBP3.88□□□□□ -1.79
SKP1-208ENST00000521216 RANBP3LQ86VV4 465 aaPredicted RBP3.88□□□□□ -1.79
SKP1-208ENST00000521216 AMZ2Q86W34 360 aa3.88□□□□□ -1.79
SKP1-208ENST00000521216 ARL10Q8N8L6 244 aa3.88□□□□□ -1.79
SKP1-208ENST00000521216 TRIM44Q96DX7 344 aaPredicted RBP3.88□□□□□ -1.79
SKP1-208ENST00000521216 CCT8L2Q96SF2 557 aa3.88□□□□□ -1.79
SKP1-208ENST00000521216 TSPAN18Q96SJ8 248 aa3.88□□□□□ -1.79
SKP1-208ENST00000521216 FTHL17Q9BXU8 183 aa3.88□□□□□ -1.79
SKP1-208ENST00000521216 IMPAD1Q9NX62 359 aa3.88□□□□□ -1.79
SKP1-208ENST00000521216 RPH3AQ9Y2J0 694 aaPredicted RBP3.88□□□□□ -1.79
SKP1-208ENST00000521216 SPAG9O60271 1321 aaKnown RBP3.88□□□□□ -1.79
SKP1-208ENST00000521216 AGRNO00468 2067 aa3.87□□□□□ -1.79
SKP1-208ENST00000521216 A0A1W2PQ72 361 aa3.87□□□□□ -1.79
SKP1-208ENST00000521216 CFAP73A6NFT4 308 aa3.87□□□□□ -1.79
SKP1-208ENST00000521216 BUB1O43683 1085 aa3.87□□□□□ -1.79
SKP1-208ENST00000521216 TYROBPO43914 113 aa3.87□□□□□ -1.79
SKP1-208ENST00000521216 SDC3O75056 442 aa3.87□□□□□ -1.79
SKP1-208ENST00000521216 IGSF6O95976 241 aa3.87□□□□□ -1.79
SKP1-208ENST00000521216 WNT2P09544 360 aa3.87□□□□□ -1.79
SKP1-208ENST00000521216 ZCCHC18P0CG32 403 aa3.87□□□□□ -1.79
SKP1-208ENST00000521216 STMN1P16949 149 aa3.87□□□□□ -1.79
SKP1-208ENST00000521216 AKT2P31751 481 aa3.87□□□□□ -1.79
SKP1-208ENST00000521216 MAGEA4P43358 317 aa3.87□□□□□ -1.79
SKP1-208ENST00000521216 NUMBP49757 651 aa3.87□□□□□ -1.79
SKP1-208ENST00000521216 ARHGDIBP52566 201 aa3.87□□□□□ -1.79
SKP1-208ENST00000521216 PPIAP62937 165 aaKnown RBP3.87□□□□□ -1.79
SKP1-208ENST00000521216 PAX2Q02962 417 aa3.87□□□□□ -1.79
SKP1-208ENST00000521216 ZNF85Q03923 595 aa3.87□□□□□ -1.79
SKP1-208ENST00000521216 SRYQ05066 204 aa3.87□□□□□ -1.79
SKP1-208ENST00000521216 ZNF33BQ06732 778 aa3.87□□□□□ -1.79
SKP1-208ENST00000521216 EIF2B1Q14232 305 aaKnown RBP3.87□□□□□ -1.79
SKP1-208ENST00000521216 SMC1AQ14683 1233 aaKnown RBP3.87□□□□□ -1.79
SKP1-208ENST00000521216 PDK1Q15118 436 aa3.87□□□□□ -1.79
SKP1-208ENST00000521216 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.87□□□□□ -1.79
SKP1-208ENST00000521216 TMEM26Q6ZUK4 368 aa3.87□□□□□ -1.79
SKP1-208ENST00000521216 C1orf186Q6ZWK4 172 aa3.87□□□□□ -1.79
SKP1-208ENST00000521216 ERICH1Q86X53 443 aa3.87□□□□□ -1.79
SKP1-208ENST00000521216 UNC5CLQ8IV45 518 aa3.87□□□□□ -1.79
SKP1-208ENST00000521216 ZNF397Q8NF99 534 aaPredicted RBP3.87□□□□□ -1.79
SKP1-208ENST00000521216 SLC13A3Q8WWT9 602 aa3.87□□□□□ -1.79
SKP1-208ENST00000521216 CCDC47Q96A33 483 aaKnown RBP3.87□□□□□ -1.79
SKP1-208ENST00000521216 NDUFAF3Q9BU61 184 aa3.87□□□□□ -1.79
SKP1-208ENST00000521216 PRR34Q9NV39 138 aa3.87□□□□□ -1.79
SKP1-208ENST00000521216 CCPG1Q9ULG6 757 aa3.87□□□□□ -1.79
SKP1-208ENST00000521216 FZR1Q9UM11 496 aa3.87□□□□□ -1.79
SKP1-208ENST00000521216 PLA2G4CQ9UP65 541 aa3.87□□□□□ -1.79
SKP1-208ENST00000521216 RNF115Q9Y4L5 304 aa3.87□□□□□ -1.79
SKP1-208ENST00000521216 ZMYM6O95789 1325 aa3.87□□□□□ -1.79
SKP1-208ENST00000521216 LRIT2A6NDA9 550 aa3.86□□□□□ -1.79
SKP1-208ENST00000521216 ALPPP05187 535 aa3.86□□□□□ -1.79
SKP1-208ENST00000521216 SLC35E2P0CK97 266 aa3.86□□□□□ -1.79
SKP1-208ENST00000521216 ALPPL2P10696 532 aa3.86□□□□□ -1.79
SKP1-208ENST00000521216 RFC2P35250 354 aa3.86□□□□□ -1.79
SKP1-208ENST00000521216 SLC6A8P48029 635 aa3.86□□□□□ -1.79
SKP1-208ENST00000521216 ZIC1Q15915 447 aa3.86□□□□□ -1.79
SKP1-208ENST00000521216 GSG1Q2KHT4 349 aa3.86□□□□□ -1.79
SKP1-208ENST00000521216 ZNF699Q32M78 642 aa3.86□□□□□ -1.79
SKP1-208ENST00000521216 BEND6Q5SZJ8 279 aaPredicted RBP3.86□□□□□ -1.79
SKP1-208ENST00000521216 IL23RQ5VWK5 629 aa3.86□□□□□ -1.79
SKP1-208ENST00000521216 RAB12Q6IQ22 244 aa3.86□□□□□ -1.79
SKP1-208ENST00000521216 P4HA3Q7Z4N8 544 aa3.86□□□□□ -1.79
SKP1-208ENST00000521216 GOLGA7Q7Z5G4 137 aa3.86□□□□□ -1.79
SKP1-208ENST00000521216 C11orf53Q8IXP5 236 aa3.86□□□□□ -1.79
SKP1-208ENST00000521216 CHCHD4Q8N4Q1 142 aa3.86□□□□□ -1.79
SKP1-208ENST00000521216 GPATCH11Q8N954 259 aa3.86□□□□□ -1.79
SKP1-208ENST00000521216 WDR36Q8NI36 951 aaKnown RBP3.86□□□□□ -1.79
SKP1-208ENST00000521216 MRAPQ8TCY5 172 aa3.86□□□□□ -1.79
SKP1-208ENST00000521216 U2AF1L4Q8WU68 220 aaKnown RBP3.86□□□□□ -1.79
SKP1-208ENST00000521216 GTSF1Q8WW33 167 aa3.86□□□□□ -1.79
SKP1-208ENST00000521216 DLX4Q92988 240 aaPredicted RBP3.86□□□□□ -1.79
SKP1-208ENST00000521216 DNAJA3Q96EY1 480 aa3.86□□□□□ -1.79
SKP1-208ENST00000521216 CHMP4BQ9H444 224 aaKnown RBP3.86□□□□□ -1.79
SKP1-208ENST00000521216 TNFRSF19Q9NS68 423 aa3.86□□□□□ -1.79
SKP1-208ENST00000521216 SENP1Q9P0U3 644 aa3.86□□□□□ -1.79
SKP1-208ENST00000521216 BCAP29Q9UHQ4 241 aa3.86□□□□□ -1.79
SKP1-208ENST00000521216 PURGQ9UJV8 347 aaKnown RBP3.86□□□□□ -1.79
SKP1-208ENST00000521216 A8MX80 341 aa3.85□□□□□ -1.79
SKP1-208ENST00000521216 G3V3Y1 287 aa3.85□□□□□ -1.79
SKP1-208ENST00000521216 GPAA1O43292 621 aa3.85□□□□□ -1.79
SKP1-208ENST00000521216 LCMT2O60294 686 aaKnown RBP3.85□□□□□ -1.79
SKP1-208ENST00000521216 STK17BO94768 372 aa3.85□□□□□ -1.79
SKP1-208ENST00000521216 MT-ATP6P00846 226 aa3.85□□□□□ -1.79
SKP1-208ENST00000521216 CXCL10P02778 98 aa3.85□□□□□ -1.79
SKP1-208ENST00000521216 HOXB7P09629 217 aa3.85□□□□□ -1.79
SKP1-208ENST00000521216 ALPIP09923 528 aa3.85□□□□□ -1.79
SKP1-208ENST00000521216 LAMP1P11279 417 aa3.85□□□□□ -1.79
SKP1-208ENST00000521216 GDF1P27539 372 aa3.85□□□□□ -1.79
SKP1-208ENST00000521216 NOVP48745 357 aa3.85□□□□□ -1.79
SKP1-208ENST00000521216 SLC25A1P53007 311 aa3.85□□□□□ -1.79
SKP1-208ENST00000521216 PARP6Q2NL67 630 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms