RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 HS6ST1O60243 411 aa13.54□□□□□ -0.24
CLN8-204ENST00000519254 CSO75390 466 aaKnown RBP13.54□□□□□ -0.24
CLN8-204ENST00000519254 CDC123O75794 336 aaPredicted RBP13.54□□□□□ -0.24
CLN8-204ENST00000519254 CPMP14384 443 aa13.54□□□□□ -0.24
CLN8-204ENST00000519254 MAN2A2P49641 1150 aa13.54□□□□□ -0.24
CLN8-204ENST00000519254 RAB38P57729 211 aa13.54□□□□□ -0.24
CLN8-204ENST00000519254 FUT5Q11128 374 aa13.54□□□□□ -0.24
CLN8-204ENST00000519254 NIPAL1Q6NVV3 410 aa13.54□□□□□ -0.24
CLN8-204ENST00000519254 SLCO6A1Q86UG4 719 aa13.54□□□□□ -0.24
CLN8-204ENST00000519254 CYP4Z1Q86W10 505 aa13.54□□□□□ -0.24
CLN8-204ENST00000519254 OFCC1Q8IZS5 231 aa13.54□□□□□ -0.24
CLN8-204ENST00000519254 METTL25Q8N6Q8 603 aa13.54□□□□□ -0.24
CLN8-204ENST00000519254 OR7G2Q8NG99 324 aa13.54□□□□□ -0.24
CLN8-204ENST00000519254 GEMIN6Q8WXD5 167 aaKnown RBP13.54□□□□□ -0.24
CLN8-204ENST00000519254 COL26A1Q96A83 441 aa13.54□□□□□ -0.24
CLN8-204ENST00000519254 CLIP3Q96DZ5 547 aa13.54□□□□□ -0.24
CLN8-204ENST00000519254 GIMAP5Q96F15 307 aa13.54□□□□□ -0.24
CLN8-204ENST00000519254 ZNF300Q96RE9 604 aaPredicted RBP13.54□□□□□ -0.24
CLN8-204ENST00000519254 EPYCQ99645 322 aa13.54□□□□□ -0.24
CLN8-204ENST00000519254 CMKLR1Q99788 373 aa13.54□□□□□ -0.24
CLN8-204ENST00000519254 TREX2Q9BQ50 279 aaPredicted RBP13.54□□□□□ -0.24
CLN8-204ENST00000519254 AMBRA1Q9C0C7 1298 aa13.54□□□□□ -0.24
CLN8-204ENST00000519254 RUBCNLQ9H714 662 aa13.54□□□□□ -0.24
CLN8-204ENST00000519254 REEP1Q9H902 201 aa13.54□□□□□ -0.24
CLN8-204ENST00000519254 FAM118AQ9NWS6 357 aa13.54□□□□□ -0.24
CLN8-204ENST00000519254 SRPK3Q9UPE1 567 aa13.54□□□□□ -0.24
CLN8-204ENST00000519254 ZNF451Q9Y4E5 1061 aa13.54□□□□□ -0.24
CLN8-204ENST00000519254 LOXL2Q9Y4K0 774 aa13.54□□□□□ -0.24
CLN8-204ENST00000519254 KCNE3Q9Y6H6 103 aa13.54□□□□□ -0.24
CLN8-204ENST00000519254 A0A1B0GX78 115 aa13.53□□□□□ -0.24
CLN8-204ENST00000519254 H0YIG0 161 aa13.53□□□□□ -0.24
CLN8-204ENST00000519254 H6PDO95479 791 aa13.53□□□□□ -0.24
CLN8-204ENST00000519254 MT-CO3P00414 261 aa13.53□□□□□ -0.24
CLN8-204ENST00000519254 NR2F1P10589 423 aa13.53□□□□□ -0.24
CLN8-204ENST00000519254 RNH1P13489 461 aaKnown RBP13.53□□□□□ -0.24
CLN8-204ENST00000519254 ITIH1P19827 911 aa13.53□□□□□ -0.24
CLN8-204ENST00000519254 RRM2P31350 389 aa13.53□□□□□ -0.24
CLN8-204ENST00000519254 GCGRP47871 477 aa13.53□□□□□ -0.24
CLN8-204ENST00000519254 DAPP51397 102 aa13.53□□□□□ -0.24
CLN8-204ENST00000519254 ID2Q02363 134 aa13.53□□□□□ -0.24
CLN8-204ENST00000519254 ERV3-1Q14264 604 aa13.53□□□□□ -0.24
CLN8-204ENST00000519254 PUM1Q14671 1186 aaKnown RBP eCLIP13.53□□□□□ -0.24
CLN8-204ENST00000519254 ISXQ2M1V0 245 aa13.53□□□□□ -0.24
CLN8-204ENST00000519254 HES3Q5TGS1 186 aa13.53□□□□□ -0.24
CLN8-204ENST00000519254 YOD1Q5VVQ6 348 aaPredicted RBP13.53□□□□□ -0.24
CLN8-204ENST00000519254 GLRX5Q86SX6 157 aa13.53□□□□□ -0.24
CLN8-204ENST00000519254 BMPERQ8N8U9 685 aa13.53□□□□□ -0.24
CLN8-204ENST00000519254 GPR32P1Q8NGA4 272 aa13.53□□□□□ -0.24
CLN8-204ENST00000519254 OR51Q1Q8NH59 317 aa13.53□□□□□ -0.24
CLN8-204ENST00000519254 PMEPA1Q969W9 287 aa13.53□□□□□ -0.24
CLN8-204ENST00000519254 ENAMQ9NRM1 1142 aa13.53□□□□□ -0.24
CLN8-204ENST00000519254 SH3GLB1Q9Y371 365 aa13.53□□□□□ -0.24
CLN8-204ENST00000519254 PCDHGB3Q9Y5G1 929 aa13.53□□□□□ -0.24
CLN8-204ENST00000519254 TMEM247A6NEH6 219 aa13.53□□□□□ -0.24
CLN8-204ENST00000519254 FGF17O60258 216 aa13.53□□□□□ -0.24
CLN8-204ENST00000519254 LDB3O75112 727 aa13.53□□□□□ -0.24
CLN8-204ENST00000519254 NME6O75414 186 aaPredicted RBP13.53□□□□□ -0.24
CLN8-204ENST00000519254 PDE9AO76083 593 aa13.53□□□□□ -0.24
CLN8-204ENST00000519254 CHRM4P08173 479 aa13.53□□□□□ -0.24
CLN8-204ENST00000519254 FTH1P19P0C7X4 201 aa13.53□□□□□ -0.24
CLN8-204ENST00000519254 PORP16435 677 aaPredicted RBP13.53□□□□□ -0.24
CLN8-204ENST00000519254 FBLP22087 321 aaKnown RBP13.53□□□□□ -0.24
CLN8-204ENST00000519254 PIGAP37287 484 aa13.53□□□□□ -0.24
CLN8-204ENST00000519254 XCR1P46094 333 aa13.53□□□□□ -0.24
CLN8-204ENST00000519254 YAP1P46937 504 aaKnown RBP13.53□□□□□ -0.24
CLN8-204ENST00000519254 ANXA11P50995 505 aaKnown RBP13.53□□□□□ -0.24
CLN8-204ENST00000519254 ARHGDIAP52565 204 aa13.53□□□□□ -0.24
CLN8-204ENST00000519254 LIMK1P53667 647 aa13.53□□□□□ -0.24
CLN8-204ENST00000519254 MAPK10P53779 464 aa13.53□□□□□ -0.24
CLN8-204ENST00000519254 KCNAB2Q13303 367 aa13.53□□□□□ -0.24
CLN8-204ENST00000519254 IL11RAQ14626 422 aa13.53□□□□□ -0.24
CLN8-204ENST00000519254 ARHGAP40Q5TG30 622 aa13.53□□□□□ -0.24
CLN8-204ENST00000519254 CDCP2Q5VXM1 449 aa13.53□□□□□ -0.24
CLN8-204ENST00000519254 KDM4DQ6B0I6 523 aa13.53□□□□□ -0.24
CLN8-204ENST00000519254 FAM111BQ6SJ93 734 aa13.53□□□□□ -0.24
CLN8-204ENST00000519254 OLIG3Q7RTU3 272 aa13.53□□□□□ -0.24
CLN8-204ENST00000519254 LGI4Q8N135 537 aa13.53□□□□□ -0.24
CLN8-204ENST00000519254 SLC38A9Q8NBW4 561 aa13.53□□□□□ -0.24
CLN8-204ENST00000519254 SIMC1Q8NDZ2 872 aa13.53□□□□□ -0.24
CLN8-204ENST00000519254 MVB12AQ96EY5 273 aa13.53□□□□□ -0.24
CLN8-204ENST00000519254 MUS81Q96NY9 551 aa13.53□□□□□ -0.24
CLN8-204ENST00000519254 OR7D2Q96RA2 312 aa13.53□□□□□ -0.24
CLN8-204ENST00000519254 ZNF347Q96SE7 839 aa13.53□□□□□ -0.24
CLN8-204ENST00000519254 ZNF304Q9HCX3 659 aa13.53□□□□□ -0.24
CLN8-204ENST00000519254 BCL2L10Q9HD36 194 aa13.53□□□□□ -0.24
CLN8-204ENST00000519254 EQTNQ9NQ60 294 aa13.53□□□□□ -0.24
CLN8-204ENST00000519254 SLC39A1Q9NY26 324 aa13.53□□□□□ -0.24
CLN8-204ENST00000519254 PDP1Q9P0J1 537 aaPredicted RBP13.53□□□□□ -0.24
CLN8-204ENST00000519254 CDC14AQ9UNH5 594 aa13.53□□□□□ -0.24
CLN8-204ENST00000519254 TESMINQ9Y4I5 508 aa13.53□□□□□ -0.24
CLN8-204ENST00000519254 LYVE1Q9Y5Y7 322 aa13.53□□□□□ -0.24
CLN8-204ENST00000519254 GPC6Q9Y625 555 aaPredicted RBP13.53□□□□□ -0.24
CLN8-204ENST00000519254 PMS2P1A4D2B8 440 aa13.52□□□□□ -0.25
CLN8-204ENST00000519254 MITFO75030 526 aaPredicted RBP13.52□□□□□ -0.25
CLN8-204ENST00000519254 GPR75O95800 540 aa13.52□□□□□ -0.25
CLN8-204ENST00000519254 FESP07332 822 aa13.52□□□□□ -0.25
CLN8-204ENST00000519254 LINGO3P0C6S8 592 aa13.52□□□□□ -0.25
CLN8-204ENST00000519254 FGF5P12034 268 aa13.52□□□□□ -0.25
CLN8-204ENST00000519254 KCNJ5P48544 419 aa13.52□□□□□ -0.25
CLN8-204ENST00000519254 MC2RQ01718 297 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms