RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 ZNF155Q12901 538 aaPredicted RBP14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 MED21Q13503 144 aa14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 NRF1Q16656 503 aa14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 MFSD4BQ5TF39 518 aa14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 PRAMEF17Q5VTA0 474 aa14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 C1orf189Q5VU69 101 aa14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 SHQ1Q6PI26 577 aaKnown RBP14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 RBM44Q6ZP01 1051 aaKnown RBP14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 NAXDQ8IW45 347 aa14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 COX18Q8N8Q8 333 aa14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 SUMF1Q8NBK3 374 aa14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 SLC16A11Q8NCK7 471 aa14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 OR52R1Q8NGF1 315 aa14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 CDS1Q92903 461 aa14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 CLIP3Q96DZ5 547 aa14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 ART5Q96L15 291 aa14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 RDH12Q96NR8 316 aa14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 ZNF300Q96RE9 604 aaPredicted RBP14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 CDC6Q99741 560 aa14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 SLC29A1Q99808 456 aa14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 LMF2Q9BU23 707 aaKnown RBP14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 EDEM2Q9BV94 578 aa14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 PINK1Q9BXM7 581 aa14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 ANKRA2Q9H9E1 313 aa14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 NECTIN3Q9NQS3 549 aa14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 USE1Q9NZ43 259 aa14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 PRODH2Q9UF12 536 aa14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 ABCG2Q9UNQ0 655 aa14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 CFL2Q9Y281 166 aa14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 IFT52Q9Y366 437 aa14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 FAM32AQ9Y421 112 aaKnown RBP14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 PCDHGA8Q9Y5G5 932 aa14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 DSPPQ9NZW4 1301 aa14.05□□□□□ -0.16
TRAPPC9-205ENST00000518839 FER1L5A0AVI2 2057 aa14.04□□□□□ -0.16
TRAPPC9-205ENST00000518839 IGLV3-12A0A075B6K2 115 aa14.04□□□□□ -0.16
TRAPPC9-205ENST00000518839 IGKV3D-11A0A0A0MRZ8 115 aa14.04□□□□□ -0.16
TRAPPC9-205ENST00000518839 A8MVJ9 347 aa14.04□□□□□ -0.16
TRAPPC9-205ENST00000518839 SYT5O00445 386 aa14.04□□□□□ -0.16
TRAPPC9-205ENST00000518839 CDX4O14627 284 aaPredicted RBP14.04□□□□□ -0.16
TRAPPC9-205ENST00000518839 DENRO43583 198 aaKnown RBP14.04□□□□□ -0.16
TRAPPC9-205ENST00000518839 DNAJB5O75953 348 aa14.04□□□□□ -0.16
TRAPPC9-205ENST00000518839 NKX2-2O95096 273 aa14.04□□□□□ -0.16
TRAPPC9-205ENST00000518839 FESP07332 822 aa14.04□□□□□ -0.16
TRAPPC9-205ENST00000518839 CYC1P08574 325 aa14.04□□□□□ -0.16
TRAPPC9-205ENST00000518839 CD59P13987 128 aa14.04□□□□□ -0.16
TRAPPC9-205ENST00000518839 S1PR1P21453 382 aa14.04□□□□□ -0.16
TRAPPC9-205ENST00000518839 ALDH3A2P51648 485 aa14.04□□□□□ -0.16
TRAPPC9-205ENST00000518839 POU6F2P78424 691 aaPredicted RBP14.04□□□□□ -0.16
TRAPPC9-205ENST00000518839 DCDP81605 110 aaKnown RBP14.04□□□□□ -0.16
TRAPPC9-205ENST00000518839 RHAGQ02094 409 aa14.04□□□□□ -0.16
TRAPPC9-205ENST00000518839 OCA2Q04671 838 aa14.04□□□□□ -0.16
TRAPPC9-205ENST00000518839 FUT7Q11130 342 aa14.04□□□□□ -0.16
TRAPPC9-205ENST00000518839 EPS8Q12929 822 aa14.04□□□□□ -0.16
TRAPPC9-205ENST00000518839 COL9A2Q14055 689 aaPredicted RBP14.04□□□□□ -0.16
TRAPPC9-205ENST00000518839 DAG1Q14118 895 aa14.04□□□□□ -0.16
TRAPPC9-205ENST00000518839 ZNF267Q14586 743 aaPredicted RBP14.04□□□□□ -0.16
TRAPPC9-205ENST00000518839 EXOSC7Q15024 291 aaKnown RBP14.04□□□□□ -0.16
TRAPPC9-205ENST00000518839 DUSP5Q16690 384 aa14.04□□□□□ -0.16
TRAPPC9-205ENST00000518839 MINDY4Q4G0A6 757 aa14.04□□□□□ -0.16
TRAPPC9-205ENST00000518839 NKAIN1Q4KMZ8 207 aa14.04□□□□□ -0.16
TRAPPC9-205ENST00000518839 STK32CQ86UX6 486 aa14.04□□□□□ -0.16
TRAPPC9-205ENST00000518839 CYP4Z1Q86W10 505 aa14.04□□□□□ -0.16
TRAPPC9-205ENST00000518839 SHISA5Q8N114 240 aa14.04□□□□□ -0.16
TRAPPC9-205ENST00000518839 SMYD1Q8NB12 490 aa14.04□□□□□ -0.16
TRAPPC9-205ENST00000518839 PLPP5Q8NEB5 264 aa14.04□□□□□ -0.16
TRAPPC9-205ENST00000518839 OTUB1Q96FW1 271 aaPredicted RBP14.04□□□□□ -0.16
TRAPPC9-205ENST00000518839 EPYCQ99645 322 aa14.04□□□□□ -0.16
TRAPPC9-205ENST00000518839 RBM4BQ9BQ04 359 aaKnown RBP14.04□□□□□ -0.16
TRAPPC9-205ENST00000518839 RBM4Q9BWF3 364 aaKnown RBP14.04□□□□□ -0.16
TRAPPC9-205ENST00000518839 GABARAPL1Q9H0R8 117 aa14.04□□□□□ -0.16
TRAPPC9-205ENST00000518839 SLC38A1Q9H2H9 487 aa14.04□□□□□ -0.16
TRAPPC9-205ENST00000518839 MTHFD2LQ9H903 347 aaPredicted RBP14.04□□□□□ -0.16
TRAPPC9-205ENST00000518839 FBXO8Q9NRD0 319 aa14.04□□□□□ -0.16
TRAPPC9-205ENST00000518839 SLC13A4Q9UKG4 626 aa14.04□□□□□ -0.16
TRAPPC9-205ENST00000518839 SLC9A8Q9Y2E8 581 aa14.04□□□□□ -0.16
TRAPPC9-205ENST00000518839 HCN4Q9Y3Q4 1203 aa14.04□□□□□ -0.16
TRAPPC9-205ENST00000518839 WDR45Q9Y484 360 aa14.04□□□□□ -0.16
TRAPPC9-205ENST00000518839 HEMK1Q9Y5R4 338 aaPredicted RBP14.04□□□□□ -0.16
TRAPPC9-205ENST00000518839 ENPP4Q9Y6X5 453 aa14.04□□□□□ -0.16
TRAPPC9-205ENST00000518839 TCRBV16S1A1N1A0A5B0 115 aa14.03□□□□□ -0.16
TRAPPC9-205ENST00000518839 B4E171 279 aa14.03□□□□□ -0.16
TRAPPC9-205ENST00000518839 PDLIM1O00151 329 aa14.03□□□□□ -0.16
TRAPPC9-205ENST00000518839 EI24O14681 340 aa14.03□□□□□ -0.16
TRAPPC9-205ENST00000518839 POLR1CO15160 346 aaPredicted RBP14.03□□□□□ -0.16
TRAPPC9-205ENST00000518839 CPNE3O75131 537 aaKnown RBP14.03□□□□□ -0.16
TRAPPC9-205ENST00000518839 STX11O75558 287 aa14.03□□□□□ -0.16
TRAPPC9-205ENST00000518839 JRKO75564 520 aa14.03□□□□□ -0.16
TRAPPC9-205ENST00000518839 RHCEP18577 417 aa14.03□□□□□ -0.16
TRAPPC9-205ENST00000518839 DCTP40126 519 aa14.03□□□□□ -0.16
TRAPPC9-205ENST00000518839 TSPAN7P41732 249 aa14.03□□□□□ -0.16
TRAPPC9-205ENST00000518839 MC2RQ01718 297 aa14.03□□□□□ -0.16
TRAPPC9-205ENST00000518839 SF3A2Q15428 464 aaKnown RBP14.03□□□□□ -0.16
TRAPPC9-205ENST00000518839 ELAVL1Q15717 326 aaKnown RBP14.03□□□□□ -0.16
TRAPPC9-205ENST00000518839 DUSP7Q16829 419 aa14.03□□□□□ -0.16
TRAPPC9-205ENST00000518839 RFX4Q33E94 735 aa14.03□□□□□ -0.16
TRAPPC9-205ENST00000518839 IQCCQ4KMZ1 466 aa14.03□□□□□ -0.16
TRAPPC9-205ENST00000518839 DCST2Q5T1A1 773 aa14.03□□□□□ -0.16
TRAPPC9-205ENST00000518839 MLIPQ5VWP3 458 aa14.03□□□□□ -0.16
TRAPPC9-205ENST00000518839 PWWP2BQ6NUJ5 590 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms