RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 ICKQ9UPZ9 632 aa11.65□□□□□ -0.54
PCM1-203ENST00000517545 EXOSC1Q9Y3B2 195 aaKnown RBP11.65□□□□□ -0.54
PCM1-203ENST00000517545 OR5K3A6NET4 321 aa11.65□□□□□ -0.54
PCM1-203ENST00000517545 RAF1P04049 648 aa11.65□□□□□ -0.54
PCM1-203ENST00000517545 URODP06132 367 aa11.65□□□□□ -0.54
PCM1-203ENST00000517545 HLA-FP30511 346 aa11.65□□□□□ -0.54
PCM1-203ENST00000517545 ATP12AP54707 1039 aa11.65□□□□□ -0.54
PCM1-203ENST00000517545 FGFBP1Q14512 234 aa11.65□□□□□ -0.54
PCM1-203ENST00000517545 EOGTQ5NDL2 527 aa11.65□□□□□ -0.54
PCM1-203ENST00000517545 ZDHHC20Q5W0Z9 365 aa11.65□□□□□ -0.54
PCM1-203ENST00000517545 C1orf94Q6P1W5 598 aa11.65□□□□□ -0.54
PCM1-203ENST00000517545 MZT2AQ6P582 158 aa11.65□□□□□ -0.54
PCM1-203ENST00000517545 TMEM220Q6QAJ8 160 aa11.65□□□□□ -0.54
PCM1-203ENST00000517545 CD300LDQ6UXZ3 194 aa11.65□□□□□ -0.54
PCM1-203ENST00000517545 KRT74Q7RTS7 529 aa11.65□□□□□ -0.54
PCM1-203ENST00000517545 IQCF2Q8IXL9 164 aa11.65□□□□□ -0.54
PCM1-203ENST00000517545 DBF4BQ8NFT6 615 aa11.65□□□□□ -0.54
PCM1-203ENST00000517545 SPRYD4Q8WW59 207 aaPredicted RBP11.65□□□□□ -0.54
PCM1-203ENST00000517545 EXOSC8Q96B26 276 aaKnown RBP11.65□□□□□ -0.54
PCM1-203ENST00000517545 EFCAB11Q9BUY7 163 aa11.65□□□□□ -0.54
PCM1-203ENST00000517545 DPCDQ9BVM2 203 aaPredicted RBP11.65□□□□□ -0.54
PCM1-203ENST00000517545 ACAT2Q9BWD1 397 aa11.65□□□□□ -0.54
PCM1-203ENST00000517545 C1QTNF7Q9BXJ2 289 aa11.65□□□□□ -0.54
PCM1-203ENST00000517545 SMG9Q9H0W8 520 aaKnown RBP11.65□□□□□ -0.54
PCM1-203ENST00000517545 IMP3Q9NV31 184 aaKnown RBP11.65□□□□□ -0.54
PCM1-203ENST00000517545 TAS2R7Q9NYW3 318 aa11.65□□□□□ -0.54
PCM1-203ENST00000517545 HLA-DPB1P04440 258 aa11.64□□□□□ -0.55
PCM1-203ENST00000517545 SMIM11AP58511 58 aa11.64□□□□□ -0.55
PCM1-203ENST00000517545 ANGPT1Q15389 498 aa11.64□□□□□ -0.55
PCM1-203ENST00000517545 TJAP1Q5JTD0 557 aa11.64□□□□□ -0.55
PCM1-203ENST00000517545 TMEM65Q6PI78 240 aa11.64□□□□□ -0.55
PCM1-203ENST00000517545 TBC1D19Q8N5T2 526 aa11.64□□□□□ -0.55
PCM1-203ENST00000517545 BBS1Q8NFJ9 593 aa11.64□□□□□ -0.55
PCM1-203ENST00000517545 ART5Q96L15 291 aa11.64□□□□□ -0.55
PCM1-203ENST00000517545 FOPNLQ96NB1 174 aa11.64□□□□□ -0.55
PCM1-203ENST00000517545 ZNF607Q96SK3 696 aa11.64□□□□□ -0.55
PCM1-203ENST00000517545 C17orf62Q9BQA9 187 aa11.64□□□□□ -0.55
PCM1-203ENST00000517545 ZFR2Q9UPR6 939 aaKnown RBP11.64□□□□□ -0.55
PCM1-203ENST00000517545 A0A0C4DFX4 3053 aa11.64□□□□□ -0.55
PCM1-203ENST00000517545 LOC105369274A0A096LPK9 316 aa11.64□□□□□ -0.55
PCM1-203ENST00000517545 TEX51A0A1B0GUA7 166 aa11.64□□□□□ -0.55
PCM1-203ENST00000517545 EEF1E1O43324 174 aaKnown RBP11.64□□□□□ -0.55
PCM1-203ENST00000517545 MMP20O60882 483 aa11.64□□□□□ -0.55
PCM1-203ENST00000517545 ATG13O75143 517 aa11.64□□□□□ -0.55
PCM1-203ENST00000517545 EIF4EP06730 217 aaKnown RBP11.64□□□□□ -0.55
PCM1-203ENST00000517545 CDH11P55287 796 aa11.64□□□□□ -0.55
PCM1-203ENST00000517545 COL9A2Q14055 689 aaPredicted RBP11.64□□□□□ -0.55
PCM1-203ENST00000517545 RNASE12Q5GAN4 147 aaKnown RBP11.64□□□□□ -0.55
PCM1-203ENST00000517545 BICRALQ6AI39 1079 aa11.64□□□□□ -0.55
PCM1-203ENST00000517545 HIST2H2AA3Q6FI13 130 aa11.64□□□□□ -0.55
PCM1-203ENST00000517545 SLC27A4Q6P1M0 643 aa11.64□□□□□ -0.55
PCM1-203ENST00000517545 SLC51BQ86UW2 128 aa11.64□□□□□ -0.55
PCM1-203ENST00000517545 KLBQ86Z14 1044 aa11.64□□□□□ -0.55
PCM1-203ENST00000517545 GRAMD2AQ8IUY3 354 aa11.64□□□□□ -0.55
PCM1-203ENST00000517545 OR4N4Q8N0Y3 316 aa11.64□□□□□ -0.55
PCM1-203ENST00000517545 SLC5A11Q8WWX8 675 aa11.64□□□□□ -0.55
PCM1-203ENST00000517545 SMG7Q92540 1137 aaKnown RBP11.64□□□□□ -0.55
PCM1-203ENST00000517545 MARVELD3Q96A59 401 aa11.64□□□□□ -0.55
PCM1-203ENST00000517545 IL17FQ96PD4 163 aa11.64□□□□□ -0.55
PCM1-203ENST00000517545 ZSCAN5AQ9BUG6 496 aa11.64□□□□□ -0.55
PCM1-203ENST00000517545 QRSL1Q9H0R6 528 aaKnown RBP11.64□□□□□ -0.55
PCM1-203ENST00000517545 GHITMQ9H3K2 345 aa11.64□□□□□ -0.55
PCM1-203ENST00000517545 ENAMQ9NRM1 1142 aa11.64□□□□□ -0.55
PCM1-203ENST00000517545 CFAP97Q9P2B7 532 aa11.64□□□□□ -0.55
PCM1-203ENST00000517545 IL20RAQ9UHF4 553 aa11.64□□□□□ -0.55
PCM1-203ENST00000517545 AUP1Q9Y679 476 aa11.64□□□□□ -0.55
PCM1-203ENST00000517545 PLPP1O14494 284 aa11.64□□□□□ -0.55
PCM1-203ENST00000517545 PDPK1O15530 556 aa11.64□□□□□ -0.55
PCM1-203ENST00000517545 LATS1O95835 1130 aa11.64□□□□□ -0.55
PCM1-203ENST00000517545 TBX6O95947 436 aaPredicted RBP11.64□□□□□ -0.55
PCM1-203ENST00000517545 TPOP07202 933 aa11.64□□□□□ -0.55
PCM1-203ENST00000517545 DDCP20711 480 aa11.64□□□□□ -0.55
PCM1-203ENST00000517545 PTBP1P26599 531 aaKnown RBP eCLIP11.64□□□□□ -0.55
PCM1-203ENST00000517545 BTG1P62324 171 aa11.64□□□□□ -0.55
PCM1-203ENST00000517545 TAP2Q03519 686 aa11.64□□□□□ -0.55
PCM1-203ENST00000517545 RPA4Q13156 261 aa11.64□□□□□ -0.55
PCM1-203ENST00000517545 ENTPD8Q5MY95 495 aa11.64□□□□□ -0.55
PCM1-203ENST00000517545 SLC30A6Q6NXT4 461 aa11.64□□□□□ -0.55
PCM1-203ENST00000517545 NXPE4Q6UWF7 544 aa11.64□□□□□ -0.55
PCM1-203ENST00000517545 WASH2PQ6VEQ5 465 aa11.64□□□□□ -0.55
PCM1-203ENST00000517545 SLC9B2Q86UD5 537 aa11.64□□□□□ -0.55
PCM1-203ENST00000517545 COMMD7Q86VX2 200 aa11.64□□□□□ -0.55
PCM1-203ENST00000517545 FIBINQ8TAL6 211 aa11.64□□□□□ -0.55
PCM1-203ENST00000517545 TEX47Q8TBZ9 253 aa11.64□□□□□ -0.55
PCM1-203ENST00000517545 RFT1Q96AA3 541 aa11.64□□□□□ -0.55
PCM1-203ENST00000517545 ZNF649Q9BS31 505 aa11.64□□□□□ -0.55
PCM1-203ENST00000517545 MYOFQ9NZM1 2061 aa11.64□□□□□ -0.55
PCM1-203ENST00000517545 FRS3O43559 492 aa11.63□□□□□ -0.55
PCM1-203ENST00000517545 UBXN7O94888 489 aa11.63□□□□□ -0.55
PCM1-203ENST00000517545 STOMP27105 288 aa11.63□□□□□ -0.55
PCM1-203ENST00000517545 DSG2Q14126 1118 aa11.63□□□□□ -0.55
PCM1-203ENST00000517545 NTRK2Q16620 822 aa11.63□□□□□ -0.55
PCM1-203ENST00000517545 FAM27D1Q5T7N8 215 aa11.63□□□□□ -0.55
PCM1-203ENST00000517545 HENMT1Q5T8I9 393 aaKnown RBP11.63□□□□□ -0.55
PCM1-203ENST00000517545 PRICKLE2Q7Z3G6 844 aa11.63□□□□□ -0.55
PCM1-203ENST00000517545 CFAP206Q8IYR0 622 aa11.63□□□□□ -0.55
PCM1-203ENST00000517545 GPR135Q8IZ08 494 aa11.63□□□□□ -0.55
PCM1-203ENST00000517545 ZNF461Q8TAF7 563 aa11.63□□□□□ -0.55
PCM1-203ENST00000517545 OR5P2Q8WZ92 322 aa11.63□□□□□ -0.55
PCM1-203ENST00000517545 SMPDL3AQ92484 453 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms