RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 TAS2R10Q9NYW0 307 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 TAC3Q9UHF0 121 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 FBXW2Q9UKT8 454 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 LOC105369274A0A096LPK9 316 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 A0A0G2JPF8 293 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 SLC22A31A6NKX4 558 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 HNRNPCL3B7ZW38 293 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 SSX4O60224 188 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 PCDH8O95206 1070 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 PRNPP04156 253 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 HNRNPCL4P0DMR1 293 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 RAB3BP20337 219 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 DDCP20711 480 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 MNDAP41218 407 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 KIR2DL3P43628 341 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 GCGRP47871 477 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 C19orf57Q0VDD7 668 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 CAMK2BQ13554 666 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 METTL11BQ5VVY1 283 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 LAIR2Q6ISS4 152 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 KIAA1211LQ6NV74 962 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 ZNF551Q7Z340 670 aaPredicted RBP6.31□□□□□ -1.4
CPNE3-203ENST00000517490 TMCO2Q7Z6W1 182 aaPredicted RBP6.31□□□□□ -1.4
CPNE3-203ENST00000517490 OR4N4Q8N0Y3 316 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 SLC44A3Q8N4M1 653 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 FAM26EQ8N5C1 309 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 DTX3Q8N9I9 347 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 CCDC107Q8WV48 283 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 SPRYD4Q8WW59 207 aaPredicted RBP6.31□□□□□ -1.4
CPNE3-203ENST00000517490 FCAMRQ8WWV6 532 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 DCLRE1CQ96SD1 692 aaKnown RBP6.31□□□□□ -1.4
CPNE3-203ENST00000517490 RBCK1Q9BYM8 510 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 ELAC1Q9H777 363 aaKnown RBP6.31□□□□□ -1.4
CPNE3-203ENST00000517490 TCF7L1Q9HCS4 588 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 SPATA6Q9NWH7 488 aaPredicted RBP6.31□□□□□ -1.4
CPNE3-203ENST00000517490 LIPT1Q9Y234 373 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 TMEM5Q9Y2B1 443 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 NAP1L6A6NFF2 107 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 URADA6NGE7 173 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 SMLR1H3BR10 107 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 M0R3H8 397 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 CASC3O15234 703 aaKnown RBP6.31□□□□□ -1.4
CPNE3-203ENST00000517490 SCGB1D2O95969 90 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 LGI1O95970 557 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 MSL3P1P0C860 447 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 GALK2Q01415 458 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 ZNHIT3Q15649 155 aaPredicted RBP6.31□□□□□ -1.4
CPNE3-203ENST00000517490 ARSIQ5FYB1 569 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 IER5LQ5T953 404 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 CD276Q5ZPR3 534 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 TXNDC8Q6A555 127 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 RPL13AP3Q6NVV1 102 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 FRRS1Q6ZNA5 592 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 LRRC56Q8IYG6 542 aaPredicted RBP6.31□□□□□ -1.4
CPNE3-203ENST00000517490 TMEM145Q8NBT3 493 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 FBXO15Q8NCQ5 510 aaPredicted RBP6.31□□□□□ -1.4
CPNE3-203ENST00000517490 WDR48Q8TAF3 677 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 ZNF461Q8TAF7 563 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 OR8D1Q8WZ84 308 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 NEIL2Q969S2 332 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 ZNF689Q96CS4 500 aaPredicted RBP6.31□□□□□ -1.4
CPNE3-203ENST00000517490 PTPN18Q99952 460 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 C19orf43Q9BQ61 176 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 ZNF436Q9C0F3 470 aaPredicted RBP6.31□□□□□ -1.4
CPNE3-203ENST00000517490 SLC6A16Q9GZN6 736 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.31□□□□□ -1.4
CPNE3-203ENST00000517490 ABT1Q9ULW3 272 aaKnown RBP6.31□□□□□ -1.4
CPNE3-203ENST00000517490 CCL27Q9Y4X3 112 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 LTBP1Q14766 1721 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 NDUFS4O43181 175 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 CREBL2O60519 120 aaPredicted RBP6.3□□□□□ -1.4
CPNE3-203ENST00000517490 FURINP09958 794 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 DRD2P14416 443 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 EDNRAP25101 427 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 CD6P30203 668 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 CAMK1Q14012 370 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 TSC22D1Q15714 1073 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 DUSP6Q16828 381 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 FLYWCH1Q4VC44 716 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 FAM69AQ5T7M9 428 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 HBMQ6B0K9 141 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 RTL4Q6ZR62 310 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 FAM83HQ6ZRV2 1179 aaPredicted RBP6.3□□□□□ -1.4
CPNE3-203ENST00000517490 TPRA1Q86W33 373 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 AMZ2Q86W34 360 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 TMEM17Q86X19 198 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 DCUN1D3Q8IWE4 304 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 PDZD9Q8IXQ8 264 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 ZNF683Q8IZ20 524 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 SPAG16Q8N0X2 631 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 CELF5Q8N6W0 485 aaKnown RBP6.3□□□□□ -1.4
CPNE3-203ENST00000517490 FANK1Q8TC84 345 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 TTC9Q92623 222 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 ASB6Q9NWX5 421 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 GPSM3Q9Y4H4 160 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 KANTRA0A1W2PQU2 76 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 UNC119BA6NIH7 251 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 H7C2Y5 167 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 SMAD6O43541 496 aaKnown RBP6.3□□□□□ -1.4
CPNE3-203ENST00000517490 POP7O75817 140 aaKnown RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms