RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 RBM41Q96IZ5 413 aaKnown RBP-1.57□□□□□ -2.66
RNU6-542P-201ENST00000516405 PITX2Q99697 317 aa-1.57□□□□□ -2.66
RNU6-542P-201ENST00000516405 ARHGDIGQ99819 225 aa-1.57□□□□□ -2.66
RNU6-542P-201ENST00000516405 DDX50Q9BQ39 737 aaKnown RBP-1.57□□□□□ -2.66
RNU6-542P-201ENST00000516405 HCAR1Q9BXC0 346 aa-1.57□□□□□ -2.66
RNU6-542P-201ENST00000516405 FAM129AQ9BZQ8 928 aa-1.57□□□□□ -2.66
RNU6-542P-201ENST00000516405 TRIM9Q9C026 710 aa-1.57□□□□□ -2.66
RNU6-542P-201ENST00000516405 SDCBP2Q9H190 292 aa-1.57□□□□□ -2.66
RNU6-542P-201ENST00000516405 DPEP3Q9H4B8 488 aa-1.57□□□□□ -2.66
RNU6-542P-201ENST00000516405 ALG9Q9H6U8 611 aa-1.57□□□□□ -2.66
RNU6-542P-201ENST00000516405 ZDHHC11Q9H8X9 412 aa-1.57□□□□□ -2.66
RNU6-542P-201ENST00000516405 CHMP1AQ9HD42 196 aaPredicted RBP-1.57□□□□□ -2.66
RNU6-542P-201ENST00000516405 SH2D2AQ9NP31 389 aa-1.57□□□□□ -2.66
RNU6-542P-201ENST00000516405 PHPT1Q9NRX4 125 aaPredicted RBP-1.57□□□□□ -2.66
RNU6-542P-201ENST00000516405 HOMER2Q9NSB8 354 aa-1.57□□□□□ -2.66
RNU6-542P-201ENST00000516405 KCND2Q9NZV8 630 aa-1.57□□□□□ -2.66
RNU6-542P-201ENST00000516405 MTRF1LQ9UGC7 380 aaKnown RBP-1.57□□□□□ -2.66
RNU6-542P-201ENST00000516405 FBXO2Q9UK22 296 aaPredicted RBP-1.57□□□□□ -2.66
RNU6-542P-201ENST00000516405 CAMK2AQ9UQM7 478 aa-1.57□□□□□ -2.66
RNU6-542P-201ENST00000516405 EXOC6BQ9Y2D4 811 aa-1.57□□□□□ -2.66
RNU6-542P-201ENST00000516405 IFT52Q9Y366 437 aa-1.57□□□□□ -2.66
RNU6-542P-201ENST00000516405 SH3GLB1Q9Y371 365 aa-1.57□□□□□ -2.66
RNU6-542P-201ENST00000516405 C22orf24Q9Y442 160 aa-1.57□□□□□ -2.66
RNU6-542P-201ENST00000516405 COLEC10Q9Y6Z7 277 aa-1.57□□□□□ -2.66
RNU6-542P-201ENST00000516405 NYNRINQ9P2P1 1898 aaKnown RBP-1.57□□□□□ -2.66
RNU6-542P-201ENST00000516405 ARHGAP32A7KAX9 2087 aa-1.57□□□□□ -2.66
RNU6-542P-201ENST00000516405 RGS12O14924 1447 aa-1.57□□□□□ -2.66
RNU6-542P-201ENST00000516405 IGKV1OR2-108A0A075B7D4 117 aa-1.58□□□□□ -2.66
RNU6-542P-201ENST00000516405 TRGV4A0A0C4DH28 118 aa-1.58□□□□□ -2.66
RNU6-542P-201ENST00000516405 C5orf63A6NC05 138 aa-1.58□□□□□ -2.66
RNU6-542P-201ENST00000516405 AGAP14A8MT82 685 aa-1.58□□□□□ -2.66
RNU6-542P-201ENST00000516405 TNFSF14O43557 240 aa-1.58□□□□□ -2.66
RNU6-542P-201ENST00000516405 HCN1O60741 890 aa-1.58□□□□□ -2.66
RNU6-542P-201ENST00000516405 TADA2AO75478 443 aa-1.58□□□□□ -2.66
RNU6-542P-201ENST00000516405 NDUFS3O75489 264 aa-1.58□□□□□ -2.66
RNU6-542P-201ENST00000516405 WNT2P09544 360 aa-1.58□□□□□ -2.66
RNU6-542P-201ENST00000516405 VPREB1P12018 145 aa-1.58□□□□□ -2.66
RNU6-542P-201ENST00000516405 ZNF35P13682 527 aa-1.58□□□□□ -2.66
RNU6-542P-201ENST00000516405 MT4P47944 62 aa-1.58□□□□□ -2.66
RNU6-542P-201ENST00000516405 INPP1P49441 399 aa-1.58□□□□□ -2.66
RNU6-542P-201ENST00000516405 CSNK1EP49674 416 aaKnown RBP-1.58□□□□□ -2.66
RNU6-542P-201ENST00000516405 SYCNQ0VAF6 134 aa-1.58□□□□□ -2.66
RNU6-542P-201ENST00000516405 NEXNQ0ZGT2 675 aa-1.58□□□□□ -2.66
RNU6-542P-201ENST00000516405 TPBGQ13641 420 aa-1.58□□□□□ -2.66
RNU6-542P-201ENST00000516405 SLC17A1Q14916 467 aa-1.58□□□□□ -2.66
RNU6-542P-201ENST00000516405 EMC2Q15006 297 aa-1.58□□□□□ -2.66
RNU6-542P-201ENST00000516405 UNC50Q53HI1 259 aa-1.58□□□□□ -2.66
RNU6-542P-201ENST00000516405 RABGAP1LQ5R372 815 aa-1.58□□□□□ -2.66
RNU6-542P-201ENST00000516405 NXNQ6DKJ4 435 aa-1.58□□□□□ -2.66
RNU6-542P-201ENST00000516405 SDE2Q6IQ49 451 aa-1.58□□□□□ -2.66
RNU6-542P-201ENST00000516405 CFAP77Q6ZQR2 320 aa-1.58□□□□□ -2.66
RNU6-542P-201ENST00000516405 FAM220AQ7Z4H9 259 aa-1.58□□□□□ -2.66
RNU6-542P-201ENST00000516405 SNX32Q86XE0 403 aa-1.58□□□□□ -2.66
RNU6-542P-201ENST00000516405 TCEAL8Q8IYN2 117 aa-1.58□□□□□ -2.66
RNU6-542P-201ENST00000516405 TMTC2Q8N394 836 aa-1.58□□□□□ -2.66
RNU6-542P-201ENST00000516405 CMTM2Q8TAZ6 248 aa-1.58□□□□□ -2.66
RNU6-542P-201ENST00000516405 SMPDL3AQ92484 453 aa-1.58□□□□□ -2.66
RNU6-542P-201ENST00000516405 FGGYQ96C11 551 aa-1.58□□□□□ -2.66
RNU6-542P-201ENST00000516405 ZBTB10Q96DT7 871 aa-1.58□□□□□ -2.66
RNU6-542P-201ENST00000516405 PCDHB16Q9NRJ7 776 aa-1.58□□□□□ -2.66
RNU6-542P-201ENST00000516405 MRGBPQ9NV56 204 aa-1.58□□□□□ -2.66
RNU6-542P-201ENST00000516405 DBF4Q9UBU7 674 aaPredicted RBP-1.58□□□□□ -2.66
RNU6-542P-201ENST00000516405 ZNF639Q9UID6 485 aa-1.58□□□□□ -2.66
RNU6-542P-201ENST00000516405 FEM1BQ9UK73 627 aa-1.58□□□□□ -2.66
RNU6-542P-201ENST00000516405 NENFQ9UMX5 172 aa-1.58□□□□□ -2.66
RNU6-542P-201ENST00000516405 HIVEP1P15822 2718 aa-1.58□□□□□ -2.66
RNU6-542P-201ENST00000516405 COL6A3P12111 3177 aa-1.58□□□□□ -2.66
RNU6-542P-201ENST00000516405 NBEAL1Q6ZS30 2694 aa-1.58□□□□□ -2.66
RNU6-542P-201ENST00000516405 USH2AO75445 5202 aa-1.58□□□□□ -2.66
RNU6-542P-201ENST00000516405 HECTD4Q9Y4D8 3996 aa-1.58□□□□□ -2.66
RNU6-542P-201ENST00000516405 GPATCH8Q9UKJ3 1502 aaKnown RBP-1.59□□□□□ -2.66
RNU6-542P-201ENST00000516405 NCKAP5O14513 1909 aa-1.59□□□□□ -2.66
RNU6-542P-201ENST00000516405 TMEM110-MUSTN1A8MSY1 372 aa-1.59□□□□□ -2.66
RNU6-542P-201ENST00000516405 SLC28A1O00337 649 aa-1.59□□□□□ -2.66
RNU6-542P-201ENST00000516405 MEIS2O14770 477 aa-1.59□□□□□ -2.66
RNU6-542P-201ENST00000516405 ZNF264O43296 627 aa-1.59□□□□□ -2.66
RNU6-542P-201ENST00000516405 CD5LO43866 347 aa-1.59□□□□□ -2.66
RNU6-542P-201ENST00000516405 SNX3O60493 162 aa-1.59□□□□□ -2.66
RNU6-542P-201ENST00000516405 MYL3P08590 195 aa-1.59□□□□□ -2.66
RNU6-542P-201ENST00000516405 OR8U8P0C7N1 319 aa-1.59□□□□□ -2.66
RNU6-542P-201ENST00000516405 ACTN1P12814 892 aa-1.59□□□□□ -2.66
RNU6-542P-201ENST00000516405 SHMT2P34897 504 aa-1.59□□□□□ -2.66
RNU6-542P-201ENST00000516405 PPM1AP35813 382 aa-1.59□□□□□ -2.66
RNU6-542P-201ENST00000516405 MAGEA6P43360 314 aa-1.59□□□□□ -2.66
RNU6-542P-201ENST00000516405 HARS2P49590 506 aaKnown RBP-1.59□□□□□ -2.66
RNU6-542P-201ENST00000516405 MAPK12P53778 367 aa-1.59□□□□□ -2.66
RNU6-542P-201ENST00000516405 OC90Q02509 493 aaPredicted RBP-1.59□□□□□ -2.66
RNU6-542P-201ENST00000516405 PLCXD2Q0VAA5 305 aa-1.59□□□□□ -2.66
RNU6-542P-201ENST00000516405 CSTF3Q12996 717 aaKnown RBP-1.59□□□□□ -2.66
RNU6-542P-201ENST00000516405 TSC22D1Q15714 1073 aa-1.59□□□□□ -2.66
RNU6-542P-201ENST00000516405 LRRC36Q1X8D7 754 aa-1.59□□□□□ -2.66
RNU6-542P-201ENST00000516405 HKDC1Q2TB90 917 aa-1.59□□□□□ -2.66
RNU6-542P-201ENST00000516405 PCGF3Q3KNV8 242 aa-1.59□□□□□ -2.66
RNU6-542P-201ENST00000516405 CASC10Q5T4H9 136 aa-1.59□□□□□ -2.66
RNU6-542P-201ENST00000516405 OR5M10Q6IEU7 315 aa-1.59□□□□□ -2.66
RNU6-542P-201ENST00000516405 CDC73Q6P1J9 531 aa-1.59□□□□□ -2.66
RNU6-542P-201ENST00000516405 GUSBP11Q6P575 273 aa-1.59□□□□□ -2.66
RNU6-542P-201ENST00000516405 SPINK6Q6UWN8 80 aa-1.59□□□□□ -2.66
RNU6-542P-201ENST00000516405 SIGLEC15Q6ZMC9 328 aa-1.59□□□□□ -2.66
RNU6-542P-201ENST00000516405 HSD11B1LQ7Z5J1 315 aa-1.59□□□□□ -2.66
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms