RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 GDPD1Q8N9F7 314 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 OR52B6Q8NGF0 335 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 OR13C3Q8NGS6 347 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 LKAAEAR1Q8TD35 194 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 FBXL20Q96IG2 436 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 HYLS1Q96M11 299 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 ACOX2Q99424 681 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 ADGRE3Q9BY15 652 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 SMPD4Q9NXE4 827 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 DHCR7Q9UBM7 475 aaKnown RBP7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 KCND3Q9UK17 655 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 DOCK6Q96HP0 2047 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 AQP12BA6NM10 295 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 PQBP1O60828 265 aaKnown RBP7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 ZNF821O75541 412 aaPredicted RBP7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 STAG3L3P0CL85 134 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 UROSP10746 265 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 PTGER3P43115 390 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 ERVPABLB-1P60509 514 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 SKP2Q13309 424 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 KCNMB1Q16558 191 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 PAGE3Q5JUK9 113 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 HAGHLQ6PII5 290 aaPredicted RBP7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 IGF2-ASQ6U949 168 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 TMEM108Q6UXF1 575 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 Q6ZSR9 355 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 S100A7AQ86SG5 101 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 KLBQ86Z14 1044 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 OR2L3Q8NG85 312 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 TMEM125Q96AQ2 219 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 LRRC58Q96CX6 371 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 GPR137Q96N19 417 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 CDK15Q96Q40 435 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 HOPXQ9BPY8 73 aaPredicted RBP7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 DNTTIP1Q9H147 329 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 MMP28Q9H239 520 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 SOX17Q9H6I2 414 aaPredicted RBP7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 IL21Q9HBE4 155 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 ANKHQ9HCJ1 492 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 MYOZ1Q9NP98 299 aaPredicted RBP7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 GFOD1Q9NXC2 390 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 CFAP97Q9P2B7 532 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 NEUROG3Q9Y4Z2 214 aa7.08□□□□□ -1.28
PDLIM5-219ENST00000514743 PLXNA2O75051 1894 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 CXorf65A6NEN9 183 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 WASH3PC4AMC7 463 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 SOCS2O14508 198 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 OR7A17O14581 309 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 SLC16A6O15403 523 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 PROM1O43490 865 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 PRAMEF2O60811 474 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 OR4F21O95013 312 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 MLYCDO95822 493 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 CRYABP02511 175 aaKnown RBP7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 ESR1P03372 595 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 CYBBP04839 570 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 CTPS1P17812 591 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 S100A7P31151 101 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 GGT5P36269 586 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 CCR4P51679 360 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 IL2P60568 153 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 TNFRSF9Q07011 255 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 TWF1Q12792 350 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 TP53BP2Q13625 1128 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 MLC1Q15049 377 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 ZNF385CQ66K41 422 aaPredicted RBP7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 LCN8Q6JVE9 175 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 PAMR1Q6UXH9 720 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 SPNS3Q6ZMD2 512 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 TMCO2Q7Z6W1 182 aaPredicted RBP7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 APCDD1Q8J025 514 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 SPAG16Q8N0X2 631 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 STPG2Q8N412 459 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 STX19Q8N4C7 294 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 C1orf52Q8N6N3 182 aaKnown RBP7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 PDLIM5Q96HC4 596 aaKnown RBP7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 LMF1Q96S06 567 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 BOCQ9BWV1 1114 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 REEP4Q9H6H4 257 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 SEBOXQ9HB31 216 aaPredicted RBP7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 PDE7BQ9NP56 450 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 C14orf119Q9NWQ9 140 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 DNAJB11Q9UBS4 358 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 CLEC4EQ9ULY5 219 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 PRSS21Q9Y6M0 314 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 MTCL1Q9Y4B5 1905 aaKnown RBP7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 A0A1W2PP18 115 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 TCRBV5S2A0A599 114 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 C22orf46C9J442 243 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 DLGAP1O14490 977 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 EEDO75530 441 aaKnown RBP7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 SOX30O94993 753 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 LATS1O95835 1130 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 HOXC4P09017 264 aaPredicted RBP7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 NCK1P16333 377 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 MYL9P24844 172 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 RFC2P35250 354 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 AHRP35869 848 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 HTR6P50406 440 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 RAB2AP61019 212 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms