RNA–Protein interactions for RNA: ENST00000514705.5

TSPAN17-208, Transcript of tetraspanin 17, humanhuman

TSL 2

Gene TSPAN17, Length 4,445 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-208ENST00000514705 RRAS2P62070 204 aaPredicted RBP13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 ZNF33BQ06732 778 aa13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 ST3GAL3Q11203 375 aa13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 MBTPS1Q14703 1052 aa13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 PLK5Q496M5 336 aa13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 LY6G5CQ5SRR4 150 aa13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 LYPD8Q6UX82 237 aa13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 CLDN22Q8N7P3 220 aa13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 CXorf40AQ8TE69 158 aa13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 ZNF582Q96NG8 517 aaPredicted RBP13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 CACNG6Q9BXT2 260 aa13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 CCR8P51685 355 aa13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 LIM2P55344 173 aa13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 PRR5P85299 388 aa13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 GPR68Q15743 365 aa13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 CCSAPQ6IQ19 270 aaPredicted RBP13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 PGBD2Q6P3X8 592 aa13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 CEACAM19Q7Z692 300 aa13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 AMZ2Q86W34 360 aa13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 KATNB1Q9BVA0 655 aa13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 GNB5O14775 395 aa13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 SCO1O75880 301 aa13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 RLN1P04808 185 aa13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 CD3GP09693 182 aa13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 GRIN2CQ14957 1233 aa13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 TRAM2Q15035 370 aa13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 SF3A2Q15428 464 aaKnown RBP13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 FCN2Q15485 313 aa13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 SYT14P1Q58G82 188 aa13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 TCTN3Q6NUS6 607 aa13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 GET4Q7L5D6 327 aaPredicted RBP13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 TP53I13Q8NBR0 393 aaPredicted RBP13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 LINC01599Q8WXQ3 324 aa13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 MCHR1Q99705 422 aa13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 MVB12BQ9H7P6 319 aa13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 BACE2Q9Y5Z0 518 aa13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 WNT6Q9Y6F9 365 aa13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 TEX13CA0A0J9YWL9 993 aa13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 PCCBP05166 539 aa13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 LAMP2P13473 410 aa13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 GCGRP47871 477 aa13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 GALK2Q01415 458 aa13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 SLC9A5Q14940 896 aa13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 WDR53Q7Z5U6 358 aaPredicted RBP13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 CPOQ8IVL8 374 aa13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 TMEM145Q8NBT3 493 aa13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 CAMK1GQ96NX5 476 aa13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 THAP7Q9BT49 309 aaPredicted RBP13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 ABCG4Q9H172 646 aa13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 XKR8Q9H6D3 395 aa13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 TMEM38AQ9H6F2 299 aa13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 FOLH1BQ9HBA9 442 aa13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 ZNF334Q9HCZ1 680 aaPredicted RBP13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 MYNNQ9NPC7 610 aa13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 IL36AQ9UHA7 158 aa13.12□□□□□ -0.31
TSPAN17-208ENST00000514705 IQCMA0A1B0GVH7 501 aa13.11□□□□□ -0.31
TSPAN17-208ENST00000514705 ZNF780AO75290 641 aaPredicted RBP13.11□□□□□ -0.31
TSPAN17-208ENST00000514705 GZMKP49863 264 aa13.11□□□□□ -0.31
TSPAN17-208ENST00000514705 P2RX3P56373 397 aa13.11□□□□□ -0.31
TSPAN17-208ENST00000514705 PLBD1Q6P4A8 553 aa13.11□□□□□ -0.31
TSPAN17-208ENST00000514705 UNC5DQ6UXZ4 953 aa13.11□□□□□ -0.31
TSPAN17-208ENST00000514705 FAM98AQ8NCA5 519 aaKnown RBP13.11□□□□□ -0.31
TSPAN17-208ENST00000514705 NDUFB11Q9NX14 153 aa13.11□□□□□ -0.31
TSPAN17-208ENST00000514705 CKAP5Q14008 2032 aa13.11□□□□□ -0.31
TSPAN17-208ENST00000514705 OR7A10O76100 309 aa13.11□□□□□ -0.31
TSPAN17-208ENST00000514705 MMP11P24347 488 aa13.11□□□□□ -0.31
TSPAN17-208ENST00000514705 CRYBB2P43320 205 aa13.11□□□□□ -0.31
TSPAN17-208ENST00000514705 CENPAP49450 140 aa13.11□□□□□ -0.31
TSPAN17-208ENST00000514705 CLCNKAP51800 687 aa13.11□□□□□ -0.31
TSPAN17-208ENST00000514705 MRPL58Q14197 206 aaKnown RBP13.11□□□□□ -0.31
TSPAN17-208ENST00000514705 IRF3Q14653 427 aa13.11□□□□□ -0.31
TSPAN17-208ENST00000514705 NRMQ8IXM6 262 aa13.11□□□□□ -0.31
TSPAN17-208ENST00000514705 OR5AR1Q8NGP9 310 aa13.11□□□□□ -0.31
TSPAN17-208ENST00000514705 TTYH1Q9H313 450 aaPredicted RBP13.11□□□□□ -0.31
TSPAN17-208ENST00000514705 DDX31Q9H8H2 851 aaKnown RBP13.11□□□□□ -0.31
TSPAN17-208ENST00000514705 TRIM36Q9NQ86 728 aa13.11□□□□□ -0.31
TSPAN17-208ENST00000514705 A0A1W2PRG6 482 aa13.11□□□□□ -0.31
TSPAN17-208ENST00000514705 GABRPO00591 440 aa13.11□□□□□ -0.31
TSPAN17-208ENST00000514705 TEX28O15482 410 aa13.11□□□□□ -0.31
TSPAN17-208ENST00000514705 RFPL3O75679 317 aa13.11□□□□□ -0.31
TSPAN17-208ENST00000514705 SDHBP21912 280 aa13.11□□□□□ -0.31
TSPAN17-208ENST00000514705 RPL4P36578 427 aaKnown RBP13.11□□□□□ -0.31
TSPAN17-208ENST00000514705 TRIM71Q2Q1W2 868 aaKnown RBP13.11□□□□□ -0.31
TSPAN17-208ENST00000514705 PRPF38BQ5VTL8 546 aaKnown RBP13.11□□□□□ -0.31
TSPAN17-208ENST00000514705 SFRP4Q6FHJ7 346 aaPredicted RBP13.11□□□□□ -0.31
TSPAN17-208ENST00000514705 SLC8B1Q6J4K2 584 aa13.11□□□□□ -0.31
TSPAN17-208ENST00000514705 FAM129CQ86XR2 697 aa13.11□□□□□ -0.31
TSPAN17-208ENST00000514705 GNPDA2Q8TDQ7 276 aa13.11□□□□□ -0.31
TSPAN17-208ENST00000514705 SAMD11Q96NU1 681 aa13.11□□□□□ -0.31
TSPAN17-208ENST00000514705 TRBV23OR9-2A0A075B6M9 112 aa13.1□□□□□ -0.31
TSPAN17-208ENST00000514705 TBC1D3BA6NDS4 549 aa13.1□□□□□ -0.31
TSPAN17-208ENST00000514705 SLC19A2O60779 497 aa13.1□□□□□ -0.31
TSPAN17-208ENST00000514705 HMGN1P05114 100 aa13.1□□□□□ -0.31
TSPAN17-208ENST00000514705 SOX18P35713 384 aa13.1□□□□□ -0.31
TSPAN17-208ENST00000514705 TSPAN5P62079 268 aa13.1□□□□□ -0.31
TSPAN17-208ENST00000514705 SNRPGP62308 76 aaKnown RBP13.1□□□□□ -0.31
TSPAN17-208ENST00000514705 EFR3AQ14156 821 aa13.1□□□□□ -0.31
TSPAN17-208ENST00000514705 TMEM107Q6UX40 140 aa13.1□□□□□ -0.31
TSPAN17-208ENST00000514705 IKBIPQ70UQ0 350 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms