RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-223	ENST00000514402	IL19	Q9UHD0	177 aa		2.82	□□□□□ -1.96
MATR3-223	ENST00000514402	KLHL21	Q9UJP4	597 aa		2.82	□□□□□ -1.96
MATR3-223	ENST00000514402	PIN4	Q9Y237	131 aa	Known RBP	2.82	□□□□□ -1.96
MATR3-223	ENST00000514402	AP1M2	Q9Y6Q5	423 aa		2.82	□□□□□ -1.96
MATR3-223	ENST00000514402	TNR	Q92752	1358 aa		2.82	□□□□□ -1.96
MATR3-223	ENST00000514402	NPIPA5	A0A0B4J1W7	369 aa		2.81	□□□□□ -1.96
MATR3-223	ENST00000514402	RNF103-CHMP3	A0A140T963	221 aa		2.81	□□□□□ -1.96
MATR3-223	ENST00000514402	SH3PXD2B	A1X283	911 aa		2.81	□□□□□ -1.96
MATR3-223	ENST00000514402	YJEFN3	A6XGL0	299 aa		2.81	□□□□□ -1.96
MATR3-223	ENST00000514402	NPIPA5	E9PKD4	350 aa		2.81	□□□□□ -1.96
MATR3-223	ENST00000514402	NME6	O75414	186 aa	Predicted RBP	2.81	□□□□□ -1.96
MATR3-223	ENST00000514402	SERPINF2	P08697	491 aa		2.81	□□□□□ -1.96
MATR3-223	ENST00000514402	SBK2	P0C263	348 aa		2.81	□□□□□ -1.96
MATR3-223	ENST00000514402	FER	P16591	822 aa		2.81	□□□□□ -1.96
MATR3-223	ENST00000514402	CCNA2	P20248	432 aa		2.81	□□□□□ -1.96
MATR3-223	ENST00000514402	RABIF	P47224	123 aa		2.81	□□□□□ -1.96
MATR3-223	ENST00000514402	P2RY4	P51582	365 aa		2.81	□□□□□ -1.96
MATR3-223	ENST00000514402	ARHGDIB	P52566	201 aa		2.81	□□□□□ -1.96
MATR3-223	ENST00000514402	CASP9	P55211	416 aa		2.81	□□□□□ -1.96
MATR3-223	ENST00000514402	STX1B	P61266	288 aa		2.81	□□□□□ -1.96
MATR3-223	ENST00000514402	SLC10A1	Q14973	349 aa		2.81	□□□□□ -1.96
MATR3-223	ENST00000514402	PDK1	Q15118	436 aa		2.81	□□□□□ -1.96
MATR3-223	ENST00000514402	KCTD11	Q693B1	232 aa		2.81	□□□□□ -1.96
MATR3-223	ENST00000514402	ZCCHC12	Q6PEW1	402 aa		2.81	□□□□□ -1.96
MATR3-223	ENST00000514402	KDELC1	Q6UW63	502 aa		2.81	□□□□□ -1.96
MATR3-223	ENST00000514402	KCTD9	Q7L273	389 aa		2.81	□□□□□ -1.96
MATR3-223	ENST00000514402	FBXO16	Q8IX29	292 aa	Predicted RBP	2.81	□□□□□ -1.96
MATR3-223	ENST00000514402	HDDC3	Q8N4P3	179 aa		2.81	□□□□□ -1.96
MATR3-223	ENST00000514402	ZNF564	Q8TBZ8	553 aa	Predicted RBP	2.81	□□□□□ -1.96
MATR3-223	ENST00000514402	UBTD2	Q8WUN7	234 aa		2.81	□□□□□ -1.96
MATR3-223	ENST00000514402	ZNF606	Q8WXB4	792 aa		2.81	□□□□□ -1.96
MATR3-223	ENST00000514402	GLYATL1	Q969I3	302 aa		2.81	□□□□□ -1.96
MATR3-223	ENST00000514402	SYAP1	Q96A49	352 aa	Predicted RBP	2.81	□□□□□ -1.96
MATR3-223	ENST00000514402	TRIM44	Q96DX7	344 aa	Predicted RBP	2.81	□□□□□ -1.96
MATR3-223	ENST00000514402	VSIG2	Q96IQ7	327 aa		2.81	□□□□□ -1.96
MATR3-223	ENST00000514402	VPS39	Q96JC1	886 aa		2.81	□□□□□ -1.96
MATR3-223	ENST00000514402	GPR174	Q9BXC1	333 aa		2.81	□□□□□ -1.96
MATR3-223	ENST00000514402	ABCG8	Q9H221	673 aa		2.81	□□□□□ -1.96
MATR3-223	ENST00000514402	HSD3B7	Q9H2F3	369 aa		2.81	□□□□□ -1.96
MATR3-223	ENST00000514402	CYP39A1	Q9NYL5	469 aa		2.81	□□□□□ -1.96
MATR3-223	ENST00000514402	APPL1	Q9UKG1	709 aa		2.81	□□□□□ -1.96
MATR3-223	ENST00000514402	DUSP12	Q9UNI6	340 aa		2.81	□□□□□ -1.96
MATR3-223	ENST00000514402	RPH3A	Q9Y2J0	694 aa	Predicted RBP	2.81	□□□□□ -1.96
MATR3-223	ENST00000514402	IKBKG	Q9Y6K9	419 aa		2.81	□□□□□ -1.96
MATR3-223	ENST00000514402	ATP8B3	O60423	1300 aa		2.8	□□□□□ -1.96
MATR3-223	ENST00000514402	SYNJ2BP-COX16	A0A087WUM0	186 aa		2.8	□□□□□ -1.96
MATR3-223	ENST00000514402	ZFP92	A6NM28	416 aa		2.8	□□□□□ -1.96
MATR3-223	ENST00000514402	CYB561D2	O14569	222 aa		2.8	□□□□□ -1.96
MATR3-223	ENST00000514402	IFNB1	P01574	187 aa		2.8	□□□□□ -1.96
MATR3-223	ENST00000514402	NUDT17	P0C025	328 aa		2.8	□□□□□ -1.96
MATR3-223	ENST00000514402	H2AFZ	P0C0S5	128 aa		2.8	□□□□□ -1.96
MATR3-223	ENST00000514402	SLC35E2	P0CK97	266 aa		2.8	□□□□□ -1.96
MATR3-223	ENST00000514402	CT45A10	P0DMU9	189 aa		2.8	□□□□□ -1.96
MATR3-223	ENST00000514402	UROS	P10746	265 aa		2.8	□□□□□ -1.96
MATR3-223	ENST00000514402	IL10	P22301	178 aa		2.8	□□□□□ -1.96
MATR3-223	ENST00000514402	FCAR	P24071	287 aa		2.8	□□□□□ -1.96
MATR3-223	ENST00000514402	ATXN3	P54252	364 aa	Predicted RBP	2.8	□□□□□ -1.96
MATR3-223	ENST00000514402	KIAA1024L	P59773	190 aa		2.8	□□□□□ -1.96
MATR3-223	ENST00000514402	ARF5	P84085	180 aa		2.8	□□□□□ -1.96
MATR3-223	ENST00000514402	TEF	Q10587	303 aa		2.8	□□□□□ -1.96
MATR3-223	ENST00000514402	ASAH1	Q13510	395 aa		2.8	□□□□□ -1.96
MATR3-223	ENST00000514402	TRADD	Q15628	312 aa		2.8	□□□□□ -1.96
MATR3-223	ENST00000514402	MS4A13	Q5J8X5	152 aa		2.8	□□□□□ -1.96
MATR3-223	ENST00000514402	ZNF658	Q5TYW1	1059 aa	Predicted RBP	2.8	□□□□□ -1.96
MATR3-223	ENST00000514402	KHDRBS2	Q5VWX1	349 aa	Known RBP	2.8	□□□□□ -1.96
MATR3-223	ENST00000514402	RTL6	Q6ICC9	239 aa		2.8	□□□□□ -1.96
MATR3-223	ENST00000514402	STEAP1B	Q6NZ63	245 aa		2.8	□□□□□ -1.96
MATR3-223	ENST00000514402	PPP1R42	Q7Z4L9	355 aa		2.8	□□□□□ -1.96
MATR3-223	ENST00000514402	ADGRD2	Q7Z7M1	963 aa		2.8	□□□□□ -1.96
MATR3-223	ENST00000514402	ERICH1	Q86X53	443 aa		2.8	□□□□□ -1.96
MATR3-223	ENST00000514402	LINC00518	Q8N0U6	118 aa		2.8	□□□□□ -1.96
MATR3-223	ENST00000514402	FBXW8	Q8N3Y1	598 aa		2.8	□□□□□ -1.96
MATR3-223	ENST00000514402	CNNM3	Q8NE01	707 aa		2.8	□□□□□ -1.96
MATR3-223	ENST00000514402	OR4L1	Q8NH43	312 aa		2.8	□□□□□ -1.96
MATR3-223	ENST00000514402	SETD7	Q8WTS6	366 aa	Known RBP	2.8	□□□□□ -1.96
MATR3-223	ENST00000514402	FRAT1	Q92837	279 aa	Predicted RBP	2.8	□□□□□ -1.96
MATR3-223	ENST00000514402	CFAP36	Q96G28	342 aa		2.8	□□□□□ -1.96
MATR3-223	ENST00000514402	NTMT1	Q9BV86	223 aa		2.8	□□□□□ -1.96
MATR3-223	ENST00000514402	TSPYL1	Q9H0U9	437 aa		2.8	□□□□□ -1.96
MATR3-223	ENST00000514402	DCTPP1	Q9H773	170 aa		2.8	□□□□□ -1.96
MATR3-223	ENST00000514402	ACOXL	Q9NUZ1	547 aa		2.8	□□□□□ -1.96
MATR3-223	ENST00000514402	PRODH2	Q9UF12	536 aa		2.8	□□□□□ -1.96
MATR3-223	ENST00000514402	FOXA2	Q9Y261	457 aa	Predicted RBP	2.8	□□□□□ -1.96
MATR3-223	ENST00000514402	NUDT21	O43809	227 aa	Known RBP	2.79	□□□□□ -1.96
MATR3-223	ENST00000514402	NOL3	O60936	208 aa	Known RBP	2.79	□□□□□ -1.96
MATR3-223	ENST00000514402	SERF1A	O75920	110 aa		2.79	□□□□□ -1.96
MATR3-223	ENST00000514402	AKAP3	O75969	853 aa		2.79	□□□□□ -1.96
MATR3-223	ENST00000514402	ALPP	P05187	535 aa		2.79	□□□□□ -1.96
MATR3-223	ENST00000514402	ALPPL2	P10696	532 aa		2.79	□□□□□ -1.96
MATR3-223	ENST00000514402	GHR	P10912	638 aa		2.79	□□□□□ -1.96
MATR3-223	ENST00000514402	ZP3	P21754	424 aa		2.79	□□□□□ -1.96
MATR3-223	ENST00000514402	CAMLG	P49069	296 aa		2.79	□□□□□ -1.96
MATR3-223	ENST00000514402	ARFIP1	P53367	373 aa		2.79	□□□□□ -1.96
MATR3-223	ENST00000514402	KLF5	Q13887	457 aa	Predicted RBP	2.79	□□□□□ -1.96
MATR3-223	ENST00000514402	SGCB	Q16585	318 aa		2.79	□□□□□ -1.96
MATR3-223	ENST00000514402	SLC22A10	Q63ZE4	541 aa		2.79	□□□□□ -1.96
MATR3-223	ENST00000514402	ETFRF1	Q6IPR1	90 aa		2.79	□□□□□ -1.96
MATR3-223	ENST00000514402	ASRGL1	Q7L266	308 aa		2.79	□□□□□ -1.96
MATR3-223	ENST00000514402	MRPL43	Q8N983	215 aa	Known RBP	2.79	□□□□□ -1.96
MATR3-223	ENST00000514402	ZNF799	Q96GE5	643 aa		2.79	□□□□□ -1.96

Retrieved 100 of 20,778 RNA–protein pairs in 26 ms