RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-223	ENST00000514267	MRGPRD	Q8TDS7	321 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	LIPH	Q8WWY8	451 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	MRPL24	Q96A35	216 aa	Known RBP	2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	SLC25A36	Q96CQ1	311 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	FAM218A	Q96MZ4	157 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	DEFB118	Q96PH6	123 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	TSPAN18	Q96SJ8	248 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	OVOL2	Q9BRP0	275 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	CXXC4	Q9H2H0	198 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	DCTPP1	Q9H773	170 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	MED20	Q9H944	212 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	POLD4	Q9HCU8	107 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	STARD5	Q9NSY2	213 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	ATAD3A	Q9NVI7	634 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	COX16	Q9P0S2	106 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	KLHL8	Q9P2G9	620 aa	Predicted RBP	2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	ATP6V1H	Q9UI12	483 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	SNX6	Q9UNH7	406 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	SLC6A5	Q9Y345	797 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	MAB21L2	Q9Y586	359 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	ARHGAP31	Q2M1Z3	1444 aa		2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	YTHDC2	Q9H6S0	1430 aa	Known RBP	2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	SF3B1	O75533	1304 aa	Known RBP eCLIP	2.92	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	RICTOR	Q6R327	1708 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267		A0A1W2PP64	1363 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	KDR	P35968	1356 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	NINL	Q9Y2I6	1382 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	RIMBP3C	A6NJZ7	1639 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	RIMBP3B	A6NNM3	1639 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	PIK3C2B	O00750	1634 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	MYO3A	Q8NEV4	1616 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	RIMBP3	Q9UFD9	1639 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	LOC390937	A0A1W2PQ73	354 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	OR5H15	A6NDH6	313 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	NPIPB9	F8W1W9	429 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	ANXA9	O76027	345 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	HPR	P00739	348 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	IGHE	P01854	428 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	CA3	P07451	260 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	FH	P07954	510 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	SLC35G4	P0C7Q5	338 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	PAICS	P22234	425 aa	Known RBP	2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	FCGR2C	P31995	323 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	TRIM23	P36406	574 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	ACADVL	P49748	655 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	SGSH	P51688	502 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	NDST2	P52849	883 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	ATP12A	P54707	1039 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	ACTR1A	P61163	376 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	RPL27	P61353	136 aa	Known RBP	2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	SPIB	Q01892	262 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	NAAA	Q02083	359 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	RBBP4	Q09028	425 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	SNTB2	Q13425	540 aa	Known RBP	2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	TATDN3	Q17R31	274 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	HKDC1	Q2TB90	917 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	CFAP157	Q5JU67	520 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	NCR3LG1	Q68D85	454 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	SULT1C3	Q6IMI6	304 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	C3P1	Q6ZMU1	363 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	CENPU	Q71F23	418 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267		Q71RC1	249 aa	Predicted RBP	2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	PTAR1	Q7Z6K3	402 aa	Predicted RBP	2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	VASH2	Q86V25	355 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	TBC1D10C	Q8IV04	446 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	ZDHHC21	Q8IVQ6	265 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	BANP	Q8N9N5	519 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	STEAP2	Q8NFT2	490 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	OR10G7	Q8NGN6	311 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	FBXO25	Q8TCJ0	367 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	RLN3	Q8WXF3	142 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	MCHR2	Q969V1	340 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	MAGED4	Q96JG8	741 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	DOCK7	Q96N67	2140 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	VPS35	Q96QK1	796 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	ZNF300	Q96RE9	604 aa	Predicted RBP	2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	F2RL3	Q96RI0	385 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	USP28	Q96RU2	1077 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	IWS1	Q96ST2	819 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	C19orf43	Q9BQ61	176 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	NLN	Q9BYT8	704 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	LPAR2	Q9HBW0	351 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	C6orf203	Q9P0P8	240 aa	Predicted RBP	2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	B9D1	Q9UPM9	204 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	PPP1R3C	Q9UQK1	317 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	KLHDC2	Q9Y2U9	406 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	MRPS18C	Q9Y3D5	142 aa	Known RBP	2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	CSNK1G3	Q9Y6M4	447 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	NEXMIF	Q5QGS0	1516 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	RIMS2	Q9UQ26	1411 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	CLTC	Q00610	1675 aa	Known RBP	2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	PREX1	Q8TCU6	1659 aa		2.91	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	SIGLEC1	Q9BZZ2	1709 aa		2.9	□□□□□ -1.94
CALCOCO2-223	ENST00000514267	TULP4	Q9NRJ4	1543 aa		2.9	□□□□□ -1.95
CALCOCO2-223	ENST00000514267	NPIPA5	A0A0B4J1W7	369 aa		2.9	□□□□□ -1.95
CALCOCO2-223	ENST00000514267		A8MU76	341 aa		2.9	□□□□□ -1.95
CALCOCO2-223	ENST00000514267	WASH3P	C4AMC7	463 aa		2.9	□□□□□ -1.95
CALCOCO2-223	ENST00000514267	NPIPA5	E9PKD4	350 aa		2.9	□□□□□ -1.95
CALCOCO2-223	ENST00000514267		K7EQD1	137 aa		2.9	□□□□□ -1.95
CALCOCO2-223	ENST00000514267	CLDN5	O00501	218 aa		2.9	□□□□□ -1.95

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms