RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 DCAF7P61962 342 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 PSPHP78330 225 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 ZNF155Q12901 538 aaPredicted RBP7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 DUSP8Q13202 625 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 GAB1Q13480 694 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 TP53BP2Q13625 1128 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 TLR1Q15399 786 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 TBR1Q16650 682 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 MEP1AQ16819 746 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 COL28A1Q2UY09 1125 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 SPDYE7PQ495Y7 208 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 VPS26BQ4G0F5 336 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 COQ5Q5HYK3 327 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 CRB2Q5IJ48 1285 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 LRIF1Q5T3J3 769 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 AGAP7PQ5VUJ5 663 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 HLA-DQA1Q5Y7H0 255 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 FAM91A1Q658Y4 838 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 ZCCHC12Q6PEW1 402 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 SLC2A7Q6PXP3 512 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 DNAJC14Q6Y2X3 702 aaPredicted RBP7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 RPS19BP1Q86WX3 136 aaKnown RBP7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 DPP10Q8N608 796 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 SIRT6Q8N6T7 355 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 NUP43Q8NFH3 380 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 FDCSPQ8NFU4 85 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 OR5AK3PQ8NH89 298 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 DNAJB8Q8NHS0 232 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 RP9Q8TA86 221 aaKnown RBP7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 PSMF1Q92530 271 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 GTF2H4Q92759 462 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 EXTL1Q92935 676 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 TP53INP1Q96A56 240 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 CRELD1Q96HD1 420 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 MAGED4Q96JG8 741 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 ZNF354BQ96LW1 612 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 AGAP4Q96P64 663 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 GAL3ST4Q96RP7 486 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 SLC35A5Q9BS91 424 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 CCDC106Q9BWC9 280 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 ITPAQ9BY32 194 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 EPS8L2Q9H6S3 715 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 ZNF552Q9H707 407 aaPredicted RBP7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 ANKRA2Q9H9E1 313 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 FOLH1BQ9HBA9 442 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 ABI3Q9P2A4 366 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 TUBD1Q9UJT1 453 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 PCDHGB7Q9Y5F8 929 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 ZZEF1O43149 2961 aa7.03□□□□□ -1.28
HMGXB3-204ENST00000513318 ATMQ13315 3056 aa7.02□□□□□ -1.29
HMGXB3-204ENST00000513318 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.02□□□□□ -1.29
HMGXB3-204ENST00000513318 A0A096LPI6 279 aa7.02□□□□□ -1.29
HMGXB3-204ENST00000513318 FRG2CA6NGY1 282 aa7.02□□□□□ -1.29
HMGXB3-204ENST00000513318 A6NL46 340 aa7.02□□□□□ -1.29
HMGXB3-204ENST00000513318 ITGA10O75578 1167 aa7.02□□□□□ -1.29
HMGXB3-204ENST00000513318 SOX30O94993 753 aa7.02□□□□□ -1.29
HMGXB3-204ENST00000513318 KCNH1O95259 989 aa7.02□□□□□ -1.29
HMGXB3-204ENST00000513318 HMGN2P05204 90 aaKnown RBP7.02□□□□□ -1.29
HMGXB3-204ENST00000513318 HOXB9P17482 250 aaPredicted RBP7.02□□□□□ -1.29
HMGXB3-204ENST00000513318 PTPN6P29350 595 aa7.02□□□□□ -1.29
HMGXB3-204ENST00000513318 PRDX6P30041 224 aa7.02□□□□□ -1.29
HMGXB3-204ENST00000513318 CHI3L1P36222 383 aaPredicted RBP7.02□□□□□ -1.29
HMGXB3-204ENST00000513318 CDKN2CP42773 168 aa7.02□□□□□ -1.29
HMGXB3-204ENST00000513318 PRIM2P49643 509 aa7.02□□□□□ -1.29
HMGXB3-204ENST00000513318 TMED10P49755 219 aaKnown RBP7.02□□□□□ -1.29
HMGXB3-204ENST00000513318 MLF1P58340 268 aa7.02□□□□□ -1.29
HMGXB3-204ENST00000513318 TXNL4AP83876 142 aaKnown RBP7.02□□□□□ -1.29
HMGXB3-204ENST00000513318 PSG6Q00889 435 aa7.02□□□□□ -1.29
HMGXB3-204ENST00000513318 STX5Q13190 355 aa7.02□□□□□ -1.29
HMGXB3-204ENST00000513318 MFAP5Q13361 173 aa7.02□□□□□ -1.29
HMGXB3-204ENST00000513318 RAPSNQ13702 412 aa7.02□□□□□ -1.29
HMGXB3-204ENST00000513318 CYLC2Q14093 348 aaPredicted RBP7.02□□□□□ -1.29
HMGXB3-204ENST00000513318 LASP1Q14847 261 aaKnown RBP7.02□□□□□ -1.29
HMGXB3-204ENST00000513318 ZNHIT3Q15649 155 aaPredicted RBP7.02□□□□□ -1.29
HMGXB3-204ENST00000513318 MMEL1Q495T6 779 aa7.02□□□□□ -1.29
HMGXB3-204ENST00000513318 PAGE3Q5JUK9 113 aa7.02□□□□□ -1.29
HMGXB3-204ENST00000513318 ACER2Q5QJU3 275 aa7.02□□□□□ -1.29
HMGXB3-204ENST00000513318 ABHD17BQ5VST6 288 aa7.02□□□□□ -1.29
HMGXB3-204ENST00000513318 SAXO2Q658L1 398 aa7.02□□□□□ -1.29
HMGXB3-204ENST00000513318 B3GNTL1Q67FW5 361 aaPredicted RBP7.02□□□□□ -1.29
HMGXB3-204ENST00000513318 TCTN3Q6NUS6 607 aa7.02□□□□□ -1.29
HMGXB3-204ENST00000513318 MFSD12Q6NUT3 480 aa7.02□□□□□ -1.29
HMGXB3-204ENST00000513318 CDC73Q6P1J9 531 aa7.02□□□□□ -1.29
HMGXB3-204ENST00000513318 C19orf48Q6RUI8 117 aa7.02□□□□□ -1.29
HMGXB3-204ENST00000513318 ANGPTL8Q6UXH0 198 aa7.02□□□□□ -1.29
HMGXB3-204ENST00000513318 ISLR2Q6UXK2 745 aa7.02□□□□□ -1.29
HMGXB3-204ENST00000513318 ZNF621Q6ZSS3 439 aa7.02□□□□□ -1.29
HMGXB3-204ENST00000513318 SNX32Q86XE0 403 aa7.02□□□□□ -1.29
HMGXB3-204ENST00000513318 TAGAPQ8N103 731 aa7.02□□□□□ -1.29
HMGXB3-204ENST00000513318 AMER2Q8N7J2 671 aa7.02□□□□□ -1.29
HMGXB3-204ENST00000513318 ZNF441Q8N8Z8 693 aa7.02□□□□□ -1.29
HMGXB3-204ENST00000513318 CDRT4Q8N9R6 151 aa7.02□□□□□ -1.29
HMGXB3-204ENST00000513318 PCYOX1LQ8NBM8 494 aa7.02□□□□□ -1.29
HMGXB3-204ENST00000513318 SIMC1Q8NDZ2 872 aa7.02□□□□□ -1.29
HMGXB3-204ENST00000513318 SLC22A8Q8TCC7 542 aa7.02□□□□□ -1.29
HMGXB3-204ENST00000513318 THAP3Q8WTV1 239 aaPredicted RBP7.02□□□□□ -1.29
HMGXB3-204ENST00000513318 TTC9Q92623 222 aa7.02□□□□□ -1.29
HMGXB3-204ENST00000513318 HOXB13Q92826 284 aaPredicted RBP7.02□□□□□ -1.29
HMGXB3-204ENST00000513318 ADIPOR1Q96A54 375 aa7.02□□□□□ -1.29
HMGXB3-204ENST00000513318 CMTM5Q96DZ9 223 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms