RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 FBXL2Q9UKC9 423 aa10.06□□□□□ -0.8
RNF4-218ENST00000513284 A0A1W2PR48 441 aa10.05□□□□□ -0.8
RNF4-218ENST00000513284 GLOD5A6NK44 160 aa10.05□□□□□ -0.8
RNF4-218ENST00000513284 SLC22A20A6NK97 555 aa10.05□□□□□ -0.8
RNF4-218ENST00000513284 E7ESA3 106 aa10.05□□□□□ -0.8
RNF4-218ENST00000513284 OR10H2O60403 315 aa10.05□□□□□ -0.8
RNF4-218ENST00000513284 PPM1BO75688 479 aa10.05□□□□□ -0.8
RNF4-218ENST00000513284 RHOXF2BP0C7M4 288 aa10.05□□□□□ -0.8
RNF4-218ENST00000513284 GALNSP34059 522 aa10.05□□□□□ -0.8
RNF4-218ENST00000513284 GGT5P36269 586 aa10.05□□□□□ -0.8
RNF4-218ENST00000513284 RPS13P62277 151 aaKnown RBP10.05□□□□□ -0.8
RNF4-218ENST00000513284 IRF8Q02556 426 aa10.05□□□□□ -0.8
RNF4-218ENST00000513284 PDK4Q16654 411 aa10.05□□□□□ -0.8
RNF4-218ENST00000513284 EXOC3L2Q2M3D2 409 aa10.05□□□□□ -0.8
RNF4-218ENST00000513284 AP5B1Q2VPB7 878 aa10.05□□□□□ -0.8
RNF4-218ENST00000513284 KBTBD12Q3ZCT8 623 aa10.05□□□□□ -0.8
RNF4-218ENST00000513284 TMEM35AQ53FP2 167 aa10.05□□□□□ -0.8
RNF4-218ENST00000513284 SCIMPQ6UWF3 145 aa10.05□□□□□ -0.8
RNF4-218ENST00000513284 LRRC70Q7Z2Q7 622 aa10.05□□□□□ -0.8
RNF4-218ENST00000513284 NUP54Q7Z3B4 507 aa10.05□□□□□ -0.8
RNF4-218ENST00000513284 P4HA3Q7Z4N8 544 aa10.05□□□□□ -0.8
RNF4-218ENST00000513284 IFNEQ86WN2 208 aa10.05□□□□□ -0.8
RNF4-218ENST00000513284 CREG2Q8IUH2 290 aa10.05□□□□□ -0.8
RNF4-218ENST00000513284 ZBED8Q8IZ13 594 aa10.05□□□□□ -0.8
RNF4-218ENST00000513284 SMAP2Q8WU79 429 aaPredicted RBP10.05□□□□□ -0.8
RNF4-218ENST00000513284 REPS1Q96D71 796 aa10.05□□□□□ -0.8
RNF4-218ENST00000513284 TNFRSF13CQ96RJ3 184 aa10.05□□□□□ -0.8
RNF4-218ENST00000513284 CPNE1Q99829 537 aa10.05□□□□□ -0.8
RNF4-218ENST00000513284 TRIM31Q9BZY9 425 aa10.05□□□□□ -0.8
RNF4-218ENST00000513284 OR51B5Q9H339 312 aa10.05□□□□□ -0.8
RNF4-218ENST00000513284 METTL7AQ9H8H3 244 aa10.05□□□□□ -0.8
RNF4-218ENST00000513284 ACTR8Q9H981 624 aa10.05□□□□□ -0.8
RNF4-218ENST00000513284 RNF122Q9H9V4 155 aa10.05□□□□□ -0.8
RNF4-218ENST00000513284 PLSCR4Q9NRQ2 329 aa10.05□□□□□ -0.8
RNF4-218ENST00000513284 MS4A12Q9NXJ0 267 aa10.05□□□□□ -0.8
RNF4-218ENST00000513284 CD274Q9NZQ7 290 aa10.05□□□□□ -0.8
RNF4-218ENST00000513284 MRPS18CQ9Y3D5 142 aaKnown RBP10.05□□□□□ -0.8
RNF4-218ENST00000513284 ASB4Q9Y574 426 aa10.05□□□□□ -0.8
RNF4-218ENST00000513284 PSAT1Q9Y617 370 aa10.05□□□□□ -0.8
RNF4-218ENST00000513284 SAR1BQ9Y6B6 198 aa10.05□□□□□ -0.8
RNF4-218ENST00000513284 C17orf51A8MQB3 221 aa10.04□□□□□ -0.8
RNF4-218ENST00000513284 PGRMC2O15173 223 aa10.04□□□□□ -0.8
RNF4-218ENST00000513284 EIF3HO15372 352 aaKnown RBP eCLIP10.04□□□□□ -0.8
RNF4-218ENST00000513284 CCNT2O60583 730 aaKnown RBP10.04□□□□□ -0.8
RNF4-218ENST00000513284 CDH16O75309 829 aa10.04□□□□□ -0.8
RNF4-218ENST00000513284 UGT2B11O75310 529 aa10.04□□□□□ -0.8
RNF4-218ENST00000513284 SLC35E2BP0CK96 405 aa10.04□□□□□ -0.8
RNF4-218ENST00000513284 SLC35E2P0CK97 266 aa10.04□□□□□ -0.8
RNF4-218ENST00000513284 CCDC166P0CW27 439 aa10.04□□□□□ -0.8
RNF4-218ENST00000513284 NAGAP17050 411 aa10.04□□□□□ -0.8
RNF4-218ENST00000513284 TCEA1P23193 301 aaKnown RBP10.04□□□□□ -0.8
RNF4-218ENST00000513284 CNTFP26441 200 aa10.04□□□□□ -0.8
RNF4-218ENST00000513284 SRD5A2P31213 254 aa10.04□□□□□ -0.8
RNF4-218ENST00000513284 GP5P40197 560 aa10.04□□□□□ -0.8
RNF4-218ENST00000513284 HSPA7P48741 367 aa10.04□□□□□ -0.8
RNF4-218ENST00000513284 PHEXP78562 749 aa10.04□□□□□ -0.8
RNF4-218ENST00000513284 VLDLRP98155 873 aa10.04□□□□□ -0.8
RNF4-218ENST00000513284 TNFRSF17Q02223 184 aa10.04□□□□□ -0.8
RNF4-218ENST00000513284 SNTA1Q13424 505 aa10.04□□□□□ -0.8
RNF4-218ENST00000513284 E2F2Q14209 437 aa10.04□□□□□ -0.8
RNF4-218ENST00000513284 TBCCQ15814 346 aa10.04□□□□□ -0.8
RNF4-218ENST00000513284 UBAP2Q5T6F2 1119 aaKnown RBP10.04□□□□□ -0.8
RNF4-218ENST00000513284 DEPDC1Q5TB30 811 aa10.04□□□□□ -0.8
RNF4-218ENST00000513284 OR5M10Q6IEU7 315 aa10.04□□□□□ -0.8
RNF4-218ENST00000513284 MRM1Q6IN84 353 aaKnown RBP10.04□□□□□ -0.8
RNF4-218ENST00000513284 MED27Q6P2C8 311 aa10.04□□□□□ -0.8
RNF4-218ENST00000513284 DNAJC14Q6Y2X3 702 aaPredicted RBP10.04□□□□□ -0.8
RNF4-218ENST00000513284 ATG4DQ86TL0 474 aaPredicted RBP10.04□□□□□ -0.8
RNF4-218ENST00000513284 PLCZ1Q86YW0 608 aa10.04□□□□□ -0.8
RNF4-218ENST00000513284 WFDC8Q8IUA0 241 aa10.04□□□□□ -0.8
RNF4-218ENST00000513284 PDPRQ8NCN5 879 aa10.04□□□□□ -0.8
RNF4-218ENST00000513284 STAG3L4Q8TBR4 150 aa10.04□□□□□ -0.8
RNF4-218ENST00000513284 PELOQ9BRX2 385 aaKnown RBP10.04□□□□□ -0.8
RNF4-218ENST00000513284 OSBPL11Q9BXB4 747 aa10.04□□□□□ -0.8
RNF4-218ENST00000513284 ZNF717Q9BY31 904 aaPredicted RBP10.04□□□□□ -0.8
RNF4-218ENST00000513284 OR10A5Q9H207 317 aa10.04□□□□□ -0.8
RNF4-218ENST00000513284 PTBP2Q9UKA9 531 aaKnown RBP10.04□□□□□ -0.8
RNF4-218ENST00000513284 MALRD1Q5VYJ5 2156 aa10.04□□□□□ -0.8
RNF4-218ENST00000513284 PKD1L1Q8TDX9 2849 aa10.03□□□□□ -0.8
RNF4-218ENST00000513284 FAM234BA2RU67 622 aa10.03□□□□□ -0.8
RNF4-218ENST00000513284 PLPP1O14494 284 aa10.03□□□□□ -0.8
RNF4-218ENST00000513284 SSX4O60224 188 aa10.03□□□□□ -0.8
RNF4-218ENST00000513284 TMPRSS11DO60235 418 aa10.03□□□□□ -0.8
RNF4-218ENST00000513284 EEDO75530 441 aaKnown RBP10.03□□□□□ -0.8
RNF4-218ENST00000513284 AQP8O94778 261 aa10.03□□□□□ -0.8
RNF4-218ENST00000513284 GSTA2P09210 222 aa10.03□□□□□ -0.8
RNF4-218ENST00000513284 PPP3CBP16298 524 aa10.03□□□□□ -0.8
RNF4-218ENST00000513284 EGR1P18146 543 aa10.03□□□□□ -0.8
RNF4-218ENST00000513284 GPX3P22352 226 aa10.03□□□□□ -0.8
RNF4-218ENST00000513284 CFPP27918 469 aa10.03□□□□□ -0.8
RNF4-218ENST00000513284 TLX1P31314 330 aaPredicted RBP10.03□□□□□ -0.8
RNF4-218ENST00000513284 SPRP35270 261 aaPredicted RBP10.03□□□□□ -0.8
RNF4-218ENST00000513284 GCKP35557 465 aa10.03□□□□□ -0.8
RNF4-218ENST00000513284 SSR2P43308 183 aa10.03□□□□□ -0.8
RNF4-218ENST00000513284 TMED10P49755 219 aaKnown RBP10.03□□□□□ -0.8
RNF4-218ENST00000513284 RAP1GDS1P52306 607 aa10.03□□□□□ -0.8
RNF4-218ENST00000513284 NRG3P56975 720 aa10.03□□□□□ -0.8
RNF4-218ENST00000513284 GNG11P61952 73 aa10.03□□□□□ -0.8
RNF4-218ENST00000513284 RPP38P78345 283 aaKnown RBP10.03□□□□□ -0.8
RNF4-218ENST00000513284 HMGCS1Q01581 520 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms