RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 ZNF764Q96H86 408 aaPredicted RBP8.5□□□□□ -1.05
VCAN-208ENST00000512590 ZNF599Q96NL3 588 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 UBTD1Q9HAC8 227 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 FZD4Q9ULV1 537 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 NPTNQ9Y639 398 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 C17orf105B2RV13 164 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 C9orf172C9J069 976 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 TLR4O00206 839 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 KIAA0355O15063 1070 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 CAPN5O15484 640 aaPredicted RBP8.5□□□□□ -1.05
VCAN-208ENST00000512590 TXNL1O43396 289 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 CALCAP01258 141 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 FNTBP49356 437 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 SEC61A1P61619 476 aaKnown RBP8.5□□□□□ -1.05
VCAN-208ENST00000512590 LCP2Q13094 533 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 SPDYCQ5MJ68 293 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 TMEM211Q6ICI0 200 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 TLDC1Q6P9B6 456 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 OR56A3Q8NH54 315 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 PSMF1Q92530 271 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 FGGYQ96C11 551 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 NINJ2Q9NZG7 142 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 SLC17A6Q9P2U8 582 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 NDRG4Q9ULP0 352 aaKnown RBP8.5□□□□□ -1.05
VCAN-208ENST00000512590 YARS2Q9Y2Z4 477 aaKnown RBP8.5□□□□□ -1.05
VCAN-208ENST00000512590 TMEM14AQ9Y6G1 99 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 CEP170Q5SW79 1584 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 OR2M5A3KFT3 312 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 PMS2P1A4D2B8 440 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 KLHL33A6NCF5 533 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 CD8B2A6NJW9 211 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 CRTAPO75718 401 aaPredicted RBP8.5□□□□□ -1.05
VCAN-208ENST00000512590 RGS11O94810 467 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 TSPAN12O95859 305 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 ITGB2P05107 769 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 RNF4P78317 190 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 SPEM2Q0P670 501 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 SLC16A14Q7RTX9 510 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 C1orf87Q8N0U7 546 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 SPARTQ8N0X7 666 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 DYNLRB2Q8TF09 96 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 ZNF597Q96LX8 424 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 MCHR1Q99705 422 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 ZNF559Q9BR84 538 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 CPPED1Q9BRF8 314 aaPredicted RBP8.5□□□□□ -1.05
VCAN-208ENST00000512590 P2RY12Q9H244 342 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 DPEP3Q9H4B8 488 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 FN3KRPQ9HA64 309 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 ELOVL3Q9HB03 270 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 ONECUT1Q9UBC0 465 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 TRAPPC2LQ9UL33 140 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 ADAMTS5Q9UNA0 930 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 BOLA2-SMG1P6H3BVE0 249 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 I6L893 689 aaPredicted RBP8.5□□□□□ -1.05
VCAN-208ENST00000512590 PHYHO14832 338 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 SYT7O43581 403 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 SOX30O94993 753 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 HAPLN1P10915 354 aaPredicted RBP8.5□□□□□ -1.05
VCAN-208ENST00000512590 EN2P19622 333 aaPredicted RBP8.5□□□□□ -1.05
VCAN-208ENST00000512590 FECHP22830 423 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 MAOBP27338 520 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 RGRP47804 291 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 OR7A5Q15622 319 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 PPM1JQ5JR12 505 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 NXPE4Q6UWF7 544 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 NUP43Q8NFH3 380 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 CREB3L4Q8TEY5 395 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 SNAPC3Q92966 411 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 SGTBQ96EQ0 304 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 FAM71F1Q96KD3 344 aaPredicted RBP8.5□□□□□ -1.05
VCAN-208ENST00000512590 ZFYVE21Q9BQ24 234 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 A3GALT2U3KPV4 340 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 ROBO3Q96MS0 1386 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 NRKQ7Z2Y5 1582 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 HDAC3O15379 428 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 SLC7A4O43246 635 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 LILRB3O75022 631 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 RFPL2O75678 378 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 MRPL3P09001 348 aaKnown RBP8.5□□□□□ -1.05
VCAN-208ENST00000512590 HOXD11P31277 338 aaPredicted RBP8.5□□□□□ -1.05
VCAN-208ENST00000512590 LILRA4P59901 499 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 NCS1P62166 190 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 ADAM15Q13444 863 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 NCEH1Q6PIU2 408 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 TMEM185AQ8NFB2 350 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 NFKBIDQ8NI38 313 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 C11orf40Q8WZ69 217 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 ITFG2Q969R8 447 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 GPR22Q99680 433 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 TMEM109Q9BVC6 243 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 DEFB127Q9H1M4 99 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 RPF2Q9H7B2 306 aaKnown RBP8.5□□□□□ -1.05
VCAN-208ENST00000512590 B3GAT1Q9P2W7 334 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 RNF6Q9Y252 685 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 CLDN25C9JDP6 229 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 FANCGO15287 622 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 HLA-FP30511 346 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 PKLRP30613 574 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 GABRA4P48169 554 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 CSNK1EP49674 416 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms