RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 NPY4RP50391 375 aa3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 ALDH3A2P51648 485 aa3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 CLDN15P56746 228 aa3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 UBASH3AP57075 661 aa3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 HAND2P61296 217 aa3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 ERVK11-1P61568 191 aa3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 GNB1P62873 340 aa3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 CCL7P80098 99 aa3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 MZT1Q08AG7 82 aa3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 TAF10Q12962 218 aa3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 C16orf72Q14CZ0 275 aa3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 SYCP1Q15431 976 aa3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 ALX1Q15699 326 aa3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 UGP2Q16851 508 aa3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 ZNF876PQ49A33 203 aa3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 TCTE1Q5JU00 501 aa3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 HECTD3Q5T447 861 aa3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 DCAF12Q5T6F0 453 aa3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 SDHAF4Q5VUM1 108 aa3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 LYPLAL1Q5VWZ2 237 aa3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 SHEQ5VZ18 495 aa3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 TRAT1Q6PIZ9 186 aa3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 MIER3Q7Z3K6 550 aa3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 TMEM135Q86UB9 458 aa3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 RTN4RL2Q86UN3 420 aa3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 KCNMB4Q86W47 210 aa3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 TBC1D10CQ8IV04 446 aa3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 BBS7Q8IWZ6 715 aa3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 EID3Q8N140 333 aa3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 ARL10Q8N8L6 244 aa3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 OR52N5Q8NH56 324 aa3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 ART4Q93070 314 aa3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 FAM162AQ96A26 154 aa3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 GIMAP5Q96F15 307 aa3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 CEP170P1Q96L14 293 aa3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 OMDQ99983 421 aa3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 TCHPQ9BT92 498 aa3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 TMEM121Q9BTD3 319 aa3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 KATNB1Q9BVA0 655 aa3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 CCDC94Q9BW85 323 aaPredicted RBP3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 ZNF696Q9H7X3 374 aa3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 Q9H8V8 135 aa3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 LRTM1Q9HBL6 345 aa3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 INTS9Q9NV88 658 aaKnown RBP3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 WDR83OSQ9Y284 106 aa3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 TMED3Q9Y3Q3 217 aa3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 PRKDCP78527 4128 aaKnown RBP3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 NUMA1Q14980 2115 aa3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 EPPK1P58107 5090 aaKnown RBP3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 TNRC6AQ8NDV7 1962 aaKnown RBP3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 TRGV8A0A0C4DH27 118 aa3.1□□□□□ -1.91
TOPBP1-208ENST00000511439 C2orf81A6NN90 581 aa3.1□□□□□ -1.91
TOPBP1-208ENST00000511439 C10orf142B7Z368 130 aa3.1□□□□□ -1.91
TOPBP1-208ENST00000511439 HHLA1C9JL84 531 aa3.1□□□□□ -1.91
TOPBP1-208ENST00000511439 PSMA7O14818 248 aa3.1□□□□□ -1.91
TOPBP1-208ENST00000511439 DFFBO76075 338 aa3.1□□□□□ -1.91
TOPBP1-208ENST00000511439 EML2O95834 649 aa3.1□□□□□ -1.91
TOPBP1-208ENST00000511439 OAS1P00973 400 aaKnown RBP3.1□□□□□ -1.91
TOPBP1-208ENST00000511439 CISD3P0C7P0 127 aa3.1□□□□□ -1.91
TOPBP1-208ENST00000511439 CALM1P0DP23 149 aa3.1□□□□□ -1.91
TOPBP1-208ENST00000511439 CALM2P0DP24 149 aa3.1□□□□□ -1.91
TOPBP1-208ENST00000511439 CALM3P0DP25 149 aa3.1□□□□□ -1.91
TOPBP1-208ENST00000511439 IRF2P14316 349 aa3.1□□□□□ -1.91
TOPBP1-208ENST00000511439 KCNE1P15382 129 aa3.1□□□□□ -1.91
TOPBP1-208ENST00000511439 TCF4P15884 667 aa3.1□□□□□ -1.91
TOPBP1-208ENST00000511439 HNRNPH3P31942 346 aaKnown RBP3.1□□□□□ -1.91
TOPBP1-208ENST00000511439 DLSTP36957 453 aa3.1□□□□□ -1.91
TOPBP1-208ENST00000511439 WNT5AP41221 380 aa3.1□□□□□ -1.91
TOPBP1-208ENST00000511439 TAF6P49848 677 aa3.1□□□□□ -1.91
TOPBP1-208ENST00000511439 CCL11P51671 97 aa3.1□□□□□ -1.91
TOPBP1-208ENST00000511439 NR0B1P51843 470 aaKnown RBP3.1□□□□□ -1.91
TOPBP1-208ENST00000511439 MFAP3P55082 362 aa3.1□□□□□ -1.91
TOPBP1-208ENST00000511439 HERV-K104P61576 105 aa3.1□□□□□ -1.91
TOPBP1-208ENST00000511439 PSMC5P62195 406 aa3.1□□□□□ -1.91
TOPBP1-208ENST00000511439 DLK1P80370 383 aa3.1□□□□□ -1.91
TOPBP1-208ENST00000511439 SCARB2Q14108 478 aa3.1□□□□□ -1.91
TOPBP1-208ENST00000511439 NPTX1Q15818 432 aa3.1□□□□□ -1.91
TOPBP1-208ENST00000511439 POM121L1PQ3SYA9 428 aa3.1□□□□□ -1.91
TOPBP1-208ENST00000511439 XKR4Q5GH76 650 aa3.1□□□□□ -1.91
TOPBP1-208ENST00000511439 C20orf194Q5TEA3 1177 aa3.1□□□□□ -1.91
TOPBP1-208ENST00000511439 PAMR1Q6UXH9 720 aa3.1□□□□□ -1.91
TOPBP1-208ENST00000511439 TPGS1Q6ZTW0 290 aa3.1□□□□□ -1.91
TOPBP1-208ENST00000511439 C11orf57Q6ZUT1 292 aaPredicted RBP3.1□□□□□ -1.91
TOPBP1-208ENST00000511439 FAM47EQ6ZV65 393 aa3.1□□□□□ -1.91
TOPBP1-208ENST00000511439 SH2D5Q6ZV89 423 aa3.1□□□□□ -1.91
TOPBP1-208ENST00000511439 SLC16A9Q7RTY1 509 aa3.1□□□□□ -1.91
TOPBP1-208ENST00000511439 ABI3BPQ7Z7G0 1075 aa3.1□□□□□ -1.91
TOPBP1-208ENST00000511439 PIGZQ86VD9 579 aa3.1□□□□□ -1.91
TOPBP1-208ENST00000511439 PARGQ86W56 976 aa3.1□□□□□ -1.91
TOPBP1-208ENST00000511439 METTL23Q86XA0 190 aa3.1□□□□□ -1.91
TOPBP1-208ENST00000511439 MMD2Q8IY49 270 aa3.1□□□□□ -1.91
TOPBP1-208ENST00000511439 CDK20Q8IZL9 346 aa3.1□□□□□ -1.91
TOPBP1-208ENST00000511439 LGI2Q8N0V4 545 aa3.1□□□□□ -1.91
TOPBP1-208ENST00000511439 THEM5Q8N1Q8 247 aa3.1□□□□□ -1.91
TOPBP1-208ENST00000511439 OR4K1Q8NGD4 311 aa3.1□□□□□ -1.91
TOPBP1-208ENST00000511439 OR6C4Q8NGE1 309 aa3.1□□□□□ -1.91
TOPBP1-208ENST00000511439 VANGL1Q8TAA9 524 aaPredicted RBP3.1□□□□□ -1.91
TOPBP1-208ENST00000511439 SETD6Q8TBK2 473 aa3.1□□□□□ -1.91
TOPBP1-208ENST00000511439 LMX1AQ8TE12 382 aa3.1□□□□□ -1.91
TOPBP1-208ENST00000511439 HPSE2Q8WWQ2 592 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms