RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 ZBED6CLQ96FA7 236 aaPredicted RBP2.68□□□□□ -1.98
TRAPPC11-207ENST00000511409 MCCC1Q96RQ3 725 aaPredicted RBP2.68□□□□□ -1.98
TRAPPC11-207ENST00000511409 PYGO2Q9BRQ0 406 aa2.68□□□□□ -1.98
TRAPPC11-207ENST00000511409 TTYH2Q9BSA4 534 aa2.68□□□□□ -1.98
TRAPPC11-207ENST00000511409 ERVK-6Q9BXR3 956 aa2.68□□□□□ -1.98
TRAPPC11-207ENST00000511409 NMNAT2Q9BZQ4 307 aa2.68□□□□□ -1.98
TRAPPC11-207ENST00000511409 HSD3B7Q9H2F3 369 aa2.68□□□□□ -1.98
TRAPPC11-207ENST00000511409 TSPY26PQ9H489 355 aa2.68□□□□□ -1.98
TRAPPC11-207ENST00000511409 ROPN1Q9HAT0 212 aaPredicted RBP2.68□□□□□ -1.98
TRAPPC11-207ENST00000511409 AMBNQ9NP70 447 aa2.68□□□□□ -1.98
TRAPPC11-207ENST00000511409 RPS10P5Q9NQ39 176 aa2.68□□□□□ -1.98
TRAPPC11-207ENST00000511409 TIGARQ9NQ88 270 aa2.68□□□□□ -1.98
TRAPPC11-207ENST00000511409 YAE1D1Q9NRH1 226 aa2.68□□□□□ -1.98
TRAPPC11-207ENST00000511409 CENPMQ9NSP4 180 aa2.68□□□□□ -1.98
TRAPPC11-207ENST00000511409 RAI14Q9P0K7 980 aa2.68□□□□□ -1.98
TRAPPC11-207ENST00000511409 MLXQ9UH92 298 aa2.68□□□□□ -1.98
TRAPPC11-207ENST00000511409 PLEKHA6Q9Y2H5 1048 aa2.68□□□□□ -1.98
TRAPPC11-207ENST00000511409 KLF2Q9Y5W3 355 aaPredicted RBP2.68□□□□□ -1.98
TRAPPC11-207ENST00000511409 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.68□□□□□ -1.98
TRAPPC11-207ENST00000511409 CLCA3PQ9Y6N3 262 aa2.68□□□□□ -1.98
TRAPPC11-207ENST00000511409 NOTCH3Q9UM47 2321 aa2.68□□□□□ -1.98
TRAPPC11-207ENST00000511409 GON4LQ3T8J9 2241 aa2.67□□□□□ -1.98
TRAPPC11-207ENST00000511409 LRIT2A6NDA9 550 aa2.67□□□□□ -1.98
TRAPPC11-207ENST00000511409 CCT8L1PA6NM43 557 aa2.67□□□□□ -1.98
TRAPPC11-207ENST00000511409 RHBDL1O75783 438 aa2.67□□□□□ -1.98
TRAPPC11-207ENST00000511409 VENTXO95231 258 aa2.67□□□□□ -1.98
TRAPPC11-207ENST00000511409 PTBP3O95758 552 aaKnown RBP2.67□□□□□ -1.98
TRAPPC11-207ENST00000511409 PIGRP01833 764 aa2.67□□□□□ -1.98
TRAPPC11-207ENST00000511409 GSTT2P0CG29 244 aa2.67□□□□□ -1.98
TRAPPC11-207ENST00000511409 GSTT2BP0CG30 244 aa2.67□□□□□ -1.98
TRAPPC11-207ENST00000511409 MTTPP55157 894 aa2.67□□□□□ -1.98
TRAPPC11-207ENST00000511409 DSCR10P59022 87 aa2.67□□□□□ -1.98
TRAPPC11-207ENST00000511409 LMO4P61968 165 aa2.67□□□□□ -1.98
TRAPPC11-207ENST00000511409 SPP2Q13103 211 aa2.67□□□□□ -1.98
TRAPPC11-207ENST00000511409 PDIA5Q14554 519 aa2.67□□□□□ -1.98
TRAPPC11-207ENST00000511409 SMC1AQ14683 1233 aaKnown RBP2.67□□□□□ -1.98
TRAPPC11-207ENST00000511409 CEBPEQ15744 281 aa2.67□□□□□ -1.98
TRAPPC11-207ENST00000511409 C17orf58Q2M2W7 97 aa2.67□□□□□ -1.98
TRAPPC11-207ENST00000511409 ZNF699Q32M78 642 aa2.67□□□□□ -1.98
TRAPPC11-207ENST00000511409 MS4A13Q5J8X5 152 aa2.67□□□□□ -1.98
TRAPPC11-207ENST00000511409 PRR5LQ6MZQ0 368 aa2.67□□□□□ -1.98
TRAPPC11-207ENST00000511409 ATRAIDQ6UW56 229 aa2.67□□□□□ -1.98
TRAPPC11-207ENST00000511409 ERICH1Q86X53 443 aa2.67□□□□□ -1.98
TRAPPC11-207ENST00000511409 CDC20BQ86Y33 519 aa2.67□□□□□ -1.98
TRAPPC11-207ENST00000511409 LYG1Q8N1E2 194 aa2.67□□□□□ -1.98
TRAPPC11-207ENST00000511409 FGFRL1Q8N441 504 aa2.67□□□□□ -1.98
TRAPPC11-207ENST00000511409 CNNM3Q8NE01 707 aa2.67□□□□□ -1.98
TRAPPC11-207ENST00000511409 RFESDQ8TAC1 157 aa2.67□□□□□ -1.98
TRAPPC11-207ENST00000511409 FLVCR1-AS1Q8TAF5 88 aa2.67□□□□□ -1.98
TRAPPC11-207ENST00000511409 DLX4Q92988 240 aaPredicted RBP2.67□□□□□ -1.98
TRAPPC11-207ENST00000511409 TADA1Q96BN2 335 aa2.67□□□□□ -1.98
TRAPPC11-207ENST00000511409 CCDC51Q96ER9 411 aa2.67□□□□□ -1.98
TRAPPC11-207ENST00000511409 KCNK16Q96T55 309 aa2.67□□□□□ -1.98
TRAPPC11-207ENST00000511409 APOL2Q9BQE5 337 aa2.67□□□□□ -1.98
TRAPPC11-207ENST00000511409 TRIM9Q9C026 710 aa2.67□□□□□ -1.98
TRAPPC11-207ENST00000511409 FAM114A2Q9NRY5 505 aa2.67□□□□□ -1.98
TRAPPC11-207ENST00000511409 DCAF13Q9NV06 445 aaKnown RBP2.67□□□□□ -1.98
TRAPPC11-207ENST00000511409 GPR83Q9NYM4 423 aa2.67□□□□□ -1.98
TRAPPC11-207ENST00000511409 ZNF581Q9P0T4 197 aa2.67□□□□□ -1.98
TRAPPC11-207ENST00000511409 PRODH2Q9UF12 536 aa2.67□□□□□ -1.98
TRAPPC11-207ENST00000511409 RSPH14Q9UHP6 348 aa2.67□□□□□ -1.98
TRAPPC11-207ENST00000511409 PURGQ9UJV8 347 aaKnown RBP2.67□□□□□ -1.98
TRAPPC11-207ENST00000511409 ABCC4O15439 1325 aa2.67□□□□□ -1.98
TRAPPC11-207ENST00000511409 COL5A2P05997 1499 aaPredicted RBP2.66□□□□□ -1.98
TRAPPC11-207ENST00000511409 A0A087WWV3 80 aa2.66□□□□□ -1.98
TRAPPC11-207ENST00000511409 ZNF840PA6NDX5 716 aa2.66□□□□□ -1.98
TRAPPC11-207ENST00000511409 EFCAB7A8K855 629 aa2.66□□□□□ -1.98
TRAPPC11-207ENST00000511409 ERI2A8K979 691 aaKnown RBP2.66□□□□□ -1.98
TRAPPC11-207ENST00000511409 SRPX2O60687 465 aaPredicted RBP2.66□□□□□ -1.98
TRAPPC11-207ENST00000511409 ZNF253O75346 499 aa2.66□□□□□ -1.98
TRAPPC11-207ENST00000511409 KBTBD11O94819 623 aa2.66□□□□□ -1.98
TRAPPC11-207ENST00000511409 PRAMEF12O95522 483 aa2.66□□□□□ -1.98
TRAPPC11-207ENST00000511409 SLC35G4P0C7Q5 338 aa2.66□□□□□ -1.98
TRAPPC11-207ENST00000511409 RRASP10301 218 aa2.66□□□□□ -1.98
TRAPPC11-207ENST00000511409 PVRP15151 417 aa2.66□□□□□ -1.98
TRAPPC11-207ENST00000511409 BCL3P20749 454 aa2.66□□□□□ -1.98
TRAPPC11-207ENST00000511409 PTPN4P29074 926 aa2.66□□□□□ -1.98
TRAPPC11-207ENST00000511409 HTR5AP47898 357 aa2.66□□□□□ -1.98
TRAPPC11-207ENST00000511409 IL9RQ01113 521 aa2.66□□□□□ -1.98
TRAPPC11-207ENST00000511409 NAAAQ02083 359 aa2.66□□□□□ -1.98
TRAPPC11-207ENST00000511409 ZNF85Q03923 595 aa2.66□□□□□ -1.98
TRAPPC11-207ENST00000511409 PPP1R3AQ16821 1122 aa2.66□□□□□ -1.98
TRAPPC11-207ENST00000511409 C15orf32Q32M92 178 aa2.66□□□□□ -1.98
TRAPPC11-207ENST00000511409 ACSF3Q4G176 576 aaPredicted RBP2.66□□□□□ -1.98
TRAPPC11-207ENST00000511409 LINC00242Q5T6M2 205 aa2.66□□□□□ -1.98
TRAPPC11-207ENST00000511409 ZNF774Q6NX45 483 aa2.66□□□□□ -1.98
TRAPPC11-207ENST00000511409 PNCKQ6P2M8 343 aa2.66□□□□□ -1.98
TRAPPC11-207ENST00000511409 ZCCHC12Q6PEW1 402 aa2.66□□□□□ -1.98
TRAPPC11-207ENST00000511409 VPS36Q86VN1 386 aa2.66□□□□□ -1.98
TRAPPC11-207ENST00000511409 HPS6Q86YV9 775 aa2.66□□□□□ -1.98
TRAPPC11-207ENST00000511409 NAXDQ8IW45 347 aa2.66□□□□□ -1.98
TRAPPC11-207ENST00000511409 SLC39A11Q8N1S5 342 aa2.66□□□□□ -1.98
TRAPPC11-207ENST00000511409 ARFGAP2Q8N6H7 521 aa2.66□□□□□ -1.98
TRAPPC11-207ENST00000511409 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.66□□□□□ -1.98
TRAPPC11-207ENST00000511409 FAM71CQ8NEG0 241 aa2.66□□□□□ -1.98
TRAPPC11-207ENST00000511409 DQX1Q8TE96 717 aaKnown RBP2.66□□□□□ -1.98
TRAPPC11-207ENST00000511409 NCLNQ969V3 563 aa2.66□□□□□ -1.98
TRAPPC11-207ENST00000511409 DNAJA3Q96EY1 480 aa2.66□□□□□ -1.98
TRAPPC11-207ENST00000511409 C14orf79Q96F83 325 aa2.66□□□□□ -1.98
TRAPPC11-207ENST00000511409 FOXN4Q96NZ1 517 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms