RNA–Protein interactions for RNA: ENST00000509468.1

KDM3B-206, Transcript of lysine demethylase 3B, humanhuman

TSL 5

Gene KDM3B, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-206ENST00000509468 FAM222BQ8WU58 562 aa11.53□□□□□ -0.56
KDM3B-206ENST00000509468 HGDQ93099 445 aa11.53□□□□□ -0.56
KDM3B-206ENST00000509468 CCDC126Q96EE4 140 aa11.53□□□□□ -0.56
KDM3B-206ENST00000509468 L3HYPDHQ96EM0 354 aa11.53□□□□□ -0.56
KDM3B-206ENST00000509468 CNRIP1Q96F85 164 aaPredicted RBP11.53□□□□□ -0.56
KDM3B-206ENST00000509468 WDYHV1Q96HA8 205 aa11.53□□□□□ -0.56
KDM3B-206ENST00000509468 COL21A1Q96P44 957 aa11.53□□□□□ -0.56
KDM3B-206ENST00000509468 OSBPL11Q9BXB4 747 aa11.53□□□□□ -0.56
KDM3B-206ENST00000509468 ITPAQ9BY32 194 aa11.53□□□□□ -0.56
KDM3B-206ENST00000509468 POLDIP3Q9BY77 421 aaKnown RBP11.53□□□□□ -0.56
KDM3B-206ENST00000509468 SHCBP1LQ9BZQ2 653 aa11.53□□□□□ -0.56
KDM3B-206ENST00000509468 EPB41L4BQ9H329 900 aa11.53□□□□□ -0.56
KDM3B-206ENST00000509468 PFDN4Q9NQP4 134 aa11.53□□□□□ -0.56
KDM3B-206ENST00000509468 KLRF1Q9NZS2 232 aa11.53□□□□□ -0.56
KDM3B-206ENST00000509468 HEY2Q9UBP5 337 aa11.53□□□□□ -0.56
KDM3B-206ENST00000509468 DTX4Q9Y2E6 619 aa11.53□□□□□ -0.56
KDM3B-206ENST00000509468 MRPS18CQ9Y3D5 142 aaKnown RBP11.53□□□□□ -0.56
KDM3B-206ENST00000509468 SERTM1A2A2V5 107 aa11.52□□□□□ -0.57
KDM3B-206ENST00000509468 SNPHO15079 494 aa11.52□□□□□ -0.57
KDM3B-206ENST00000509468 RIPK2O43353 540 aa11.52□□□□□ -0.57
KDM3B-206ENST00000509468 PCDH7O60245 1069 aa11.52□□□□□ -0.57
KDM3B-206ENST00000509468 REM1O75628 298 aa11.52□□□□□ -0.57
KDM3B-206ENST00000509468 IL18BPO95998 194 aa11.52□□□□□ -0.57
KDM3B-206ENST00000509468 CYP4B1P13584 511 aa11.52□□□□□ -0.57
KDM3B-206ENST00000509468 GCAP28676 217 aa11.52□□□□□ -0.57
KDM3B-206ENST00000509468 KRT20P35900 424 aa11.52□□□□□ -0.57
KDM3B-206ENST00000509468 ART1P52961 327 aa11.52□□□□□ -0.57
KDM3B-206ENST00000509468 NAGLUP54802 743 aa11.52□□□□□ -0.57
KDM3B-206ENST00000509468 EEF1A1P68104 462 aaKnown RBP11.52□□□□□ -0.57
KDM3B-206ENST00000509468 MRPS22P82650 360 aaKnown RBP11.52□□□□□ -0.57
KDM3B-206ENST00000509468 LCP2Q13094 533 aa11.52□□□□□ -0.57
KDM3B-206ENST00000509468 EFR3AQ14156 821 aa11.52□□□□□ -0.57
KDM3B-206ENST00000509468 NNATQ16517 81 aa11.52□□□□□ -0.57
KDM3B-206ENST00000509468 ERCC6LQ2NKX8 1250 aa11.52□□□□□ -0.57
KDM3B-206ENST00000509468 EEF1A1P5Q5VTE0 462 aa11.52□□□□□ -0.57
KDM3B-206ENST00000509468 GALNT18Q6P9A2 607 aa11.52□□□□□ -0.57
KDM3B-206ENST00000509468 ENPP6Q6UWR7 440 aa11.52□□□□□ -0.57
KDM3B-206ENST00000509468 YRDCQ86U90 279 aaKnown RBP11.52□□□□□ -0.57
KDM3B-206ENST00000509468 ZZZ3Q8IYH5 903 aa11.52□□□□□ -0.57
KDM3B-206ENST00000509468 MMP21Q8N119 569 aa11.52□□□□□ -0.57
KDM3B-206ENST00000509468 KIF18AQ8NI77 898 aa11.52□□□□□ -0.57
KDM3B-206ENST00000509468 NINJ1Q92982 152 aa11.52□□□□□ -0.57
KDM3B-206ENST00000509468 EXOSC8Q96B26 276 aaKnown RBP11.52□□□□□ -0.57
KDM3B-206ENST00000509468 TMEM237Q96Q45 408 aa11.52□□□□□ -0.57
KDM3B-206ENST00000509468 TRIB1Q96RU8 372 aa11.52□□□□□ -0.57
KDM3B-206ENST00000509468 NODALQ96S42 347 aa11.52□□□□□ -0.57
KDM3B-206ENST00000509468 HBEGFQ99075 208 aa11.52□□□□□ -0.57
KDM3B-206ENST00000509468 SLC35C2Q9NQQ7 365 aa11.52□□□□□ -0.57
KDM3B-206ENST00000509468 SIRT5Q9NXA8 310 aa11.52□□□□□ -0.57
KDM3B-206ENST00000509468 TAS2R9Q9NYW1 312 aa11.52□□□□□ -0.57
KDM3B-206ENST00000509468 EHD3Q9NZN3 535 aa11.52□□□□□ -0.57
KDM3B-206ENST00000509468 WBP11Q9Y2W2 641 aaKnown RBP11.52□□□□□ -0.57
KDM3B-206ENST00000509468 POLQO75417 2590 aa11.52□□□□□ -0.57
KDM3B-206ENST00000509468 C2orf72A6NCS6 295 aa11.51□□□□□ -0.57
KDM3B-206ENST00000509468 MBD3L4A6NDZ8 208 aaPredicted RBP11.51□□□□□ -0.57
KDM3B-206ENST00000509468 MBD3L3A6NE82 208 aaPredicted RBP11.51□□□□□ -0.57
KDM3B-206ENST00000509468 PRAMEF25A6NGN4 478 aa11.51□□□□□ -0.57
KDM3B-206ENST00000509468 MBD3L5A6NJ08 208 aaPredicted RBP11.51□□□□□ -0.57
KDM3B-206ENST00000509468 H3BQF6 201 aa11.51□□□□□ -0.57
KDM3B-206ENST00000509468 UGT2B11O75310 529 aa11.51□□□□□ -0.57
KDM3B-206ENST00000509468 IL3P08700 152 aa11.51□□□□□ -0.57
KDM3B-206ENST00000509468 ANXA4P09525 319 aaPredicted RBP11.51□□□□□ -0.57
KDM3B-206ENST00000509468 CT45A8P0DMV1 189 aa11.51□□□□□ -0.57
KDM3B-206ENST00000509468 CT45A9P0DMV2 189 aa11.51□□□□□ -0.57
KDM3B-206ENST00000509468 CHN1P15882 459 aa11.51□□□□□ -0.57
KDM3B-206ENST00000509468 PCSK2P16519 638 aa11.51□□□□□ -0.57
KDM3B-206ENST00000509468 ZNF136P52737 540 aa11.51□□□□□ -0.57
KDM3B-206ENST00000509468 PNLIPRP2P54317 469 aa11.51□□□□□ -0.57
KDM3B-206ENST00000509468 RAE1P78406 368 aaKnown RBP11.51□□□□□ -0.57
KDM3B-206ENST00000509468 MRPS35P82673 323 aaKnown RBP11.51□□□□□ -0.57
KDM3B-206ENST00000509468 HMGCS1Q01581 520 aa11.51□□□□□ -0.57
KDM3B-206ENST00000509468 DUSP2Q05923 314 aa11.51□□□□□ -0.57
KDM3B-206ENST00000509468 SLC29A2Q14542 456 aa11.51□□□□□ -0.57
KDM3B-206ENST00000509468 DAZAP2Q15038 168 aaPredicted RBP11.51□□□□□ -0.57
KDM3B-206ENST00000509468 LTB4RQ15722 352 aa11.51□□□□□ -0.57
KDM3B-206ENST00000509468 FLYWCH1Q4VC44 716 aa11.51□□□□□ -0.57
KDM3B-206ENST00000509468 CT45A2Q5DJT8 189 aa11.51□□□□□ -0.57
KDM3B-206ENST00000509468 ZNF628Q5EBL2 1059 aa11.51□□□□□ -0.57
KDM3B-206ENST00000509468 SPDYAQ5MJ70 313 aa11.51□□□□□ -0.57
KDM3B-206ENST00000509468 TCHHL1Q5QJ38 904 aaPredicted RBP11.51□□□□□ -0.57
KDM3B-206ENST00000509468 FAM180BQ6P0A1 224 aa11.51□□□□□ -0.57
KDM3B-206ENST00000509468 POMZP3Q6PJE2 187 aa11.51□□□□□ -0.57
KDM3B-206ENST00000509468 PLCZ1Q86YW0 608 aa11.51□□□□□ -0.57
KDM3B-206ENST00000509468 TRIM42Q8IWZ5 723 aa11.51□□□□□ -0.57
KDM3B-206ENST00000509468 WDSUB1Q8N9V3 476 aa11.51□□□□□ -0.57
KDM3B-206ENST00000509468 RELL2Q8NC24 303 aaPredicted RBP11.51□□□□□ -0.57
KDM3B-206ENST00000509468 NAXEQ8NCW5 288 aa11.51□□□□□ -0.57
KDM3B-206ENST00000509468 SIMC1Q8NDZ2 872 aa11.51□□□□□ -0.57
KDM3B-206ENST00000509468 OR14L1PQ8NHC6 308 aa11.51□□□□□ -0.57
KDM3B-206ENST00000509468 GOT1L1Q8NHS2 421 aaPredicted RBP11.51□□□□□ -0.57
KDM3B-206ENST00000509468 MBD3L2Q8NHZ7 208 aaPredicted RBP11.51□□□□□ -0.57
KDM3B-206ENST00000509468 C16orf78Q8WTQ4 265 aa11.51□□□□□ -0.57
KDM3B-206ENST00000509468 TMBIM1Q969X1 311 aa11.51□□□□□ -0.57
KDM3B-206ENST00000509468 SLC35A4Q96G79 324 aa11.51□□□□□ -0.57
KDM3B-206ENST00000509468 APIPQ96GX9 242 aa11.51□□□□□ -0.57
KDM3B-206ENST00000509468 ZFP3Q96NJ6 502 aa11.51□□□□□ -0.57
KDM3B-206ENST00000509468 BTBD9Q96Q07 612 aa11.51□□□□□ -0.57
KDM3B-206ENST00000509468 BBS4Q96RK4 519 aa11.51□□□□□ -0.57
KDM3B-206ENST00000509468 TM9SF2Q99805 663 aa11.51□□□□□ -0.57
KDM3B-206ENST00000509468 SH3GL2Q99962 352 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms