RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 TOMM20Q15388 145 aa11.86□□□□□ -0.51
HMGCS1-205ENST00000508319 SPIN4Q56A73 249 aa11.86□□□□□ -0.51
HMGCS1-205ENST00000508319 WIPI1Q5MNZ9 446 aaPredicted RBP11.86□□□□□ -0.51
HMGCS1-205ENST00000508319 NSUN5P2Q63ZY6 315 aa11.86□□□□□ -0.51
HMGCS1-205ENST00000508319 SLC30A6Q6NXT4 461 aa11.86□□□□□ -0.51
HMGCS1-205ENST00000508319 ANGPTL8Q6UXH0 198 aa11.86□□□□□ -0.51
HMGCS1-205ENST00000508319 TRMT10CQ7L0Y3 403 aaKnown RBP11.86□□□□□ -0.51
HMGCS1-205ENST00000508319 SLC22A9Q8IVM8 553 aa11.86□□□□□ -0.51
HMGCS1-205ENST00000508319 FAM83FQ8NEG4 500 aaPredicted RBP11.86□□□□□ -0.51
HMGCS1-205ENST00000508319 MZB1Q8WU39 189 aa11.86□□□□□ -0.51
HMGCS1-205ENST00000508319 L3HYPDHQ96EM0 354 aa11.86□□□□□ -0.51
HMGCS1-205ENST00000508319 APIPQ96GX9 242 aa11.86□□□□□ -0.51
HMGCS1-205ENST00000508319 WDYHV1Q96HA8 205 aa11.86□□□□□ -0.51
HMGCS1-205ENST00000508319 BTBD9Q96Q07 612 aa11.86□□□□□ -0.51
HMGCS1-205ENST00000508319 TXLNGYQ9BZA5 131 aa11.86□□□□□ -0.51
HMGCS1-205ENST00000508319 EPB41L4BQ9H329 900 aa11.86□□□□□ -0.51
HMGCS1-205ENST00000508319 ANKRA2Q9H9E1 313 aa11.86□□□□□ -0.51
HMGCS1-205ENST00000508319 KLRF1Q9NZS2 232 aa11.86□□□□□ -0.51
HMGCS1-205ENST00000508319 PRODH2Q9UF12 536 aa11.86□□□□□ -0.51
HMGCS1-205ENST00000508319 FETUBQ9UGM5 382 aa11.86□□□□□ -0.51
HMGCS1-205ENST00000508319 MAPRE3Q9UPY8 281 aa11.86□□□□□ -0.51
HMGCS1-205ENST00000508319 CAMK2AQ9UQM7 478 aa11.86□□□□□ -0.51
HMGCS1-205ENST00000508319 DLGAP4Q9Y2H0 992 aa11.86□□□□□ -0.51
HMGCS1-205ENST00000508319 PRRC2AP48634 2157 aaKnown RBP11.85□□□□□ -0.51
HMGCS1-205ENST00000508319 MPDZO75970 2070 aa11.85□□□□□ -0.51
HMGCS1-205ENST00000508319 GNG14A0A1W2PPG7 69 aa11.85□□□□□ -0.51
HMGCS1-205ENST00000508319 C2orf72A6NCS6 295 aa11.85□□□□□ -0.51
HMGCS1-205ENST00000508319 MBD3L4A6NDZ8 208 aaPredicted RBP11.85□□□□□ -0.51
HMGCS1-205ENST00000508319 MBD3L3A6NE82 208 aaPredicted RBP11.85□□□□□ -0.51
HMGCS1-205ENST00000508319 PRAMEF25A6NGN4 478 aa11.85□□□□□ -0.51
HMGCS1-205ENST00000508319 MBD3L5A6NJ08 208 aaPredicted RBP11.85□□□□□ -0.51
HMGCS1-205ENST00000508319 CD8B2A6NJW9 211 aa11.85□□□□□ -0.51
HMGCS1-205ENST00000508319 GOLGA8RI6L899 631 aa11.85□□□□□ -0.51
HMGCS1-205ENST00000508319 SYT5O00445 386 aa11.85□□□□□ -0.51
HMGCS1-205ENST00000508319 DVL2O14641 736 aa11.85□□□□□ -0.51
HMGCS1-205ENST00000508319 ICOSLGO75144 302 aa11.85□□□□□ -0.51
HMGCS1-205ENST00000508319 ULK1O75385 1050 aa11.85□□□□□ -0.51
HMGCS1-205ENST00000508319 NME6O75414 186 aaPredicted RBP11.85□□□□□ -0.51
HMGCS1-205ENST00000508319 ESRRBO95718 433 aa11.85□□□□□ -0.51
HMGCS1-205ENST00000508319 FAM153BP0C7A2 387 aa11.85□□□□□ -0.51
HMGCS1-205ENST00000508319 DRD5P21918 477 aa11.85□□□□□ -0.51
HMGCS1-205ENST00000508319 HMOX2P30519 316 aa11.85□□□□□ -0.51
HMGCS1-205ENST00000508319 TIA1P31483 386 aaKnown RBP eCLIP11.85□□□□□ -0.512e-6■■■■□ 20.6
HMGCS1-205ENST00000508319 DNAJA1P31689 397 aaKnown RBP11.85□□□□□ -0.51
HMGCS1-205ENST00000508319 UQCRC1P31930 480 aa11.85□□□□□ -0.51
HMGCS1-205ENST00000508319 CORO7P57737 925 aa11.85□□□□□ -0.51
HMGCS1-205ENST00000508319 ACSM2AQ08AH3 577 aa11.85□□□□□ -0.51
HMGCS1-205ENST00000508319 SNTA1Q13424 505 aa11.85□□□□□ -0.51
HMGCS1-205ENST00000508319 CEBPEQ15744 281 aa11.85□□□□□ -0.51
HMGCS1-205ENST00000508319 FBXL19-AS1Q494R0 122 aa11.85□□□□□ -0.51
HMGCS1-205ENST00000508319 FAM153CQ494X1 144 aa11.85□□□□□ -0.51
HMGCS1-205ENST00000508319 ACSM2BQ68CK6 577 aa11.85□□□□□ -0.51
HMGCS1-205ENST00000508319 GALNT18Q6P9A2 607 aa11.85□□□□□ -0.51
HMGCS1-205ENST00000508319 YRDCQ86U90 279 aaKnown RBP11.85□□□□□ -0.51
HMGCS1-205ENST00000508319 CCDC116Q8IYX3 515 aa11.85□□□□□ -0.51
HMGCS1-205ENST00000508319 GBP7Q8N8V2 638 aaPredicted RBP11.85□□□□□ -0.51
HMGCS1-205ENST00000508319 WDSUB1Q8N9V3 476 aa11.85□□□□□ -0.51
HMGCS1-205ENST00000508319 OR9A2Q8NGT5 310 aa11.85□□□□□ -0.51
HMGCS1-205ENST00000508319 MBD3L2Q8NHZ7 208 aaPredicted RBP11.85□□□□□ -0.51
HMGCS1-205ENST00000508319 METTL6Q8TCB7 284 aa11.85□□□□□ -0.51
HMGCS1-205ENST00000508319 ACMSDQ8TDX5 336 aa11.85□□□□□ -0.51
HMGCS1-205ENST00000508319 RNASE6Q93091 150 aaKnown RBP11.85□□□□□ -0.51
HMGCS1-205ENST00000508319 ABTB1Q969K4 478 aaPredicted RBP11.85□□□□□ -0.51
HMGCS1-205ENST00000508319 TMBIM1Q969X1 311 aa11.85□□□□□ -0.51
HMGCS1-205ENST00000508319 EXOSC8Q96B26 276 aaKnown RBP11.85□□□□□ -0.51
HMGCS1-205ENST00000508319 ERP27Q96DN0 273 aa11.85□□□□□ -0.51
HMGCS1-205ENST00000508319 VSTM2LQ96N03 204 aa11.85□□□□□ -0.51
HMGCS1-205ENST00000508319 KCNA7Q96RP8 456 aa11.85□□□□□ -0.51
HMGCS1-205ENST00000508319 EBPLQ9BY08 206 aa11.85□□□□□ -0.51
HMGCS1-205ENST00000508319 GSTO2Q9H4Y5 243 aa11.85□□□□□ -0.51
HMGCS1-205ENST00000508319 SERHLQ9NQF3 203 aa11.85□□□□□ -0.51
HMGCS1-205ENST00000508319 CRIM1Q9NZV1 1036 aa11.85□□□□□ -0.51
HMGCS1-205ENST00000508319 PSMC3IPQ9P2W1 217 aaPredicted RBP11.85□□□□□ -0.51
HMGCS1-205ENST00000508319 ZNF629Q9UEG4 869 aaPredicted RBP11.85□□□□□ -0.51
HMGCS1-205ENST00000508319 STK38LQ9Y2H1 464 aa11.85□□□□□ -0.51
HMGCS1-205ENST00000508319 GPR55Q9Y2T6 319 aaPredicted RBP11.85□□□□□ -0.51
HMGCS1-205ENST00000508319 TIMM22Q9Y584 194 aa11.85□□□□□ -0.51
HMGCS1-205ENST00000508319 VPS13CQ709C8 3753 aa11.85□□□□□ -0.51
HMGCS1-205ENST00000508319 ACANP16112 2415 aa11.84□□□□□ -0.51
HMGCS1-205ENST00000508319 FAM221AA4D161 298 aa11.84□□□□□ -0.51
HMGCS1-205ENST00000508319 OR6C70A6NIJ9 312 aa11.84□□□□□ -0.51
HMGCS1-205ENST00000508319 IL2RAP01589 272 aa11.84□□□□□ -0.51
HMGCS1-205ENST00000508319 ENO1P06733 434 aaKnown RBP11.84□□□□□ -0.51
HMGCS1-205ENST00000508319 GSTA1P08263 222 aa11.84□□□□□ -0.51
HMGCS1-205ENST00000508319 CT45A8P0DMV1 189 aa11.84□□□□□ -0.51
HMGCS1-205ENST00000508319 CT45A9P0DMV2 189 aa11.84□□□□□ -0.51
HMGCS1-205ENST00000508319 DRD2P14416 443 aa11.84□□□□□ -0.51
HMGCS1-205ENST00000508319 PEX19P40855 299 aa11.84□□□□□ -0.51
HMGCS1-205ENST00000508319 KIR2DL3P43628 341 aa11.84□□□□□ -0.51
HMGCS1-205ENST00000508319 FOXA1P55317 472 aa11.84□□□□□ -0.51
HMGCS1-205ENST00000508319 PKNOX1P55347 436 aa11.84□□□□□ -0.51
HMGCS1-205ENST00000508319 RIPPLY3P57055 190 aa11.84□□□□□ -0.51
HMGCS1-205ENST00000508319 CT45A2Q5DJT8 189 aa11.84□□□□□ -0.51
HMGCS1-205ENST00000508319 NPSR1Q6W5P4 371 aa11.84□□□□□ -0.51
HMGCS1-205ENST00000508319 C16orf78Q8WTQ4 265 aa11.84□□□□□ -0.51
HMGCS1-205ENST00000508319 RNF138Q8WVD3 245 aa11.84□□□□□ -0.51
HMGCS1-205ENST00000508319 KAT2AQ92830 837 aa11.84□□□□□ -0.51
HMGCS1-205ENST00000508319 SLC35A4Q96G79 324 aa11.84□□□□□ -0.51
HMGCS1-205ENST00000508319 COL21A1Q96P44 957 aa11.84□□□□□ -0.51
HMGCS1-205ENST00000508319 TRIB1Q96RU8 372 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms