RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 PDPK1O15530 556 aa18.25■□□□□ 0.51
SFXN1-209ENST00000508290 TRIM3O75382 744 aaPredicted RBP18.25■□□□□ 0.51
SFXN1-209ENST00000508290 LYPLA1O75608 230 aaPredicted RBP18.25■□□□□ 0.51
SFXN1-209ENST00000508290 JUNP05412 331 aaKnown RBP18.25■□□□□ 0.51
SFXN1-209ENST00000508290 TPOP07202 933 aa18.25■□□□□ 0.51
SFXN1-209ENST00000508290 PRPS2P11908 318 aa18.25■□□□□ 0.51
SFXN1-209ENST00000508290 TACR1P25103 407 aa18.25■□□□□ 0.51
SFXN1-209ENST00000508290 HPCAL1P37235 193 aa18.25■□□□□ 0.51
SFXN1-209ENST00000508290 CASP3P42574 277 aa18.25■□□□□ 0.51
SFXN1-209ENST00000508290 MAGEA5P43359 124 aa18.25■□□□□ 0.51
SFXN1-209ENST00000508290 SLC18A1P54219 525 aa18.25■□□□□ 0.51
SFXN1-209ENST00000508290 HSF1Q00613 529 aa18.25■□□□□ 0.51
SFXN1-209ENST00000508290 PDE7AQ13946 482 aa18.25■□□□□ 0.51
SFXN1-209ENST00000508290 EFR3AQ14156 821 aa18.25■□□□□ 0.51
SFXN1-209ENST00000508290 SMU1Q2TAY7 513 aa18.25■□□□□ 0.51
SFXN1-209ENST00000508290 GALNTL6Q49A17 601 aa18.25■□□□□ 0.51
SFXN1-209ENST00000508290 SLC30A6Q6NXT4 461 aa18.25■□□□□ 0.51
SFXN1-209ENST00000508290 TRILQ7L0X0 811 aa18.25■□□□□ 0.51
SFXN1-209ENST00000508290 FGD2Q7Z6J4 655 aa18.25■□□□□ 0.51
SFXN1-209ENST00000508290 OR2L13Q8N349 312 aa18.25■□□□□ 0.51
SFXN1-209ENST00000508290 OR5M3Q8NGP4 307 aa18.25■□□□□ 0.51
SFXN1-209ENST00000508290 KAT2AQ92830 837 aa18.25■□□□□ 0.51
SFXN1-209ENST00000508290 SARAFQ96BY9 339 aa18.25■□□□□ 0.51
SFXN1-209ENST00000508290 TMCO6Q96DC7 493 aa18.25■□□□□ 0.51
SFXN1-209ENST00000508290 SLC35A4Q96G79 324 aa18.25■□□□□ 0.51
SFXN1-209ENST00000508290 TMEM41AQ96HV5 264 aa18.25■□□□□ 0.51
SFXN1-209ENST00000508290 RILPQ96NA2 401 aa18.25■□□□□ 0.51
SFXN1-209ENST00000508290 DEFB127Q9H1M4 99 aa18.25■□□□□ 0.51
SFXN1-209ENST00000508290 METTL7AQ9H8H3 244 aa18.25■□□□□ 0.51
SFXN1-209ENST00000508290 KCNK9Q9NPC2 374 aa18.25■□□□□ 0.51
SFXN1-209ENST00000508290 ACSS1Q9NUB1 689 aaPredicted RBP18.25■□□□□ 0.51
SFXN1-209ENST00000508290 DDX18Q9NVP1 670 aaKnown RBP18.25■□□□□ 0.51
SFXN1-209ENST00000508290 SH3BGRL2Q9UJC5 107 aa18.25■□□□□ 0.51
SFXN1-209ENST00000508290 C19orf53Q9UNZ5 99 aaPredicted RBP18.25■□□□□ 0.51
SFXN1-209ENST00000508290 MAPRE3Q9UPY8 281 aa18.25■□□□□ 0.51
SFXN1-209ENST00000508290 RAP2CQ9Y3L5 183 aa18.25■□□□□ 0.51
SFXN1-209ENST00000508290 PCDHGB3Q9Y5G1 929 aa18.25■□□□□ 0.51
SFXN1-209ENST00000508290 KLF2Q9Y5W3 355 aaPredicted RBP18.25■□□□□ 0.51
SFXN1-209ENST00000508290 ZGRF1Q86YA3 2104 aa18.25■□□□□ 0.51
SFXN1-209ENST00000508290 A1L4Q6 167 aa18.24■□□□□ 0.51
SFXN1-209ENST00000508290 BCKDHAP12694 445 aa18.24■□□□□ 0.51
SFXN1-209ENST00000508290 MASP1P48740 699 aa18.24■□□□□ 0.51
SFXN1-209ENST00000508290 ABCE1P61221 599 aaKnown RBP18.24■□□□□ 0.51
SFXN1-209ENST00000508290 ZNHIT3Q15649 155 aaPredicted RBP18.24■□□□□ 0.51
SFXN1-209ENST00000508290 CHI3L2Q15782 390 aa18.24■□□□□ 0.51
SFXN1-209ENST00000508290 TMEM211Q6ICI0 200 aa18.24■□□□□ 0.51
SFXN1-209ENST00000508290 TMEM64Q6YI46 380 aa18.24■□□□□ 0.51
SFXN1-209ENST00000508290 MRGPRGQ86SM5 289 aa18.24■□□□□ 0.51
SFXN1-209ENST00000508290 LRRC34Q8IZ02 419 aa18.24■□□□□ 0.51
SFXN1-209ENST00000508290 OR7G2Q8NG99 324 aa18.24■□□□□ 0.51
SFXN1-209ENST00000508290 AGR3Q8TD06 166 aa18.24■□□□□ 0.51
SFXN1-209ENST00000508290 ITLN2Q8WWU7 325 aaPredicted RBP18.24■□□□□ 0.51
SFXN1-209ENST00000508290 EGLN2Q96KS0 407 aa18.24■□□□□ 0.51
SFXN1-209ENST00000508290 COL21A1Q96P44 957 aa18.24■□□□□ 0.51
SFXN1-209ENST00000508290 TSSK3Q96PN8 268 aa18.24■□□□□ 0.51
SFXN1-209ENST00000508290 GLIPR2Q9H4G4 154 aa18.24■□□□□ 0.51
SFXN1-209ENST00000508290 LDAHQ9H6V9 325 aa18.24■□□□□ 0.51
SFXN1-209ENST00000508290 FOLH1BQ9HBA9 442 aa18.24■□□□□ 0.51
SFXN1-209ENST00000508290 PROK2Q9HC23 129 aa18.24■□□□□ 0.51
SFXN1-209ENST00000508290 ZDHHC2Q9UIJ5 367 aa18.24■□□□□ 0.51
SFXN1-209ENST00000508290 MRTO4Q9UKD2 239 aaKnown RBP18.24■□□□□ 0.51
SFXN1-209ENST00000508290 TRGV5A0A0B4J1U4 118 aa18.23■□□□□ 0.51
SFXN1-209ENST00000508290 ATP6AP2A0A1C7CYW4 349 aa18.23■□□□□ 0.51
SFXN1-209ENST00000508290 LRRC3CA6NJW4 275 aa18.23■□□□□ 0.51
SFXN1-209ENST00000508290 FIGNL2A6NMB9 653 aa18.23■□□□□ 0.51
SFXN1-209ENST00000508290 ATP6AP2O75787 350 aa18.23■□□□□ 0.51
SFXN1-209ENST00000508290 PSMG1O95456 288 aa18.23■□□□□ 0.51
SFXN1-209ENST00000508290 CLDN1O95832 211 aa18.23■□□□□ 0.51
SFXN1-209ENST00000508290 HOXD4P09016 255 aaPredicted RBP18.23■□□□□ 0.51
SFXN1-209ENST00000508290 CT45A8P0DMV1 189 aa18.23■□□□□ 0.51
SFXN1-209ENST00000508290 CT45A9P0DMV2 189 aa18.23■□□□□ 0.51
SFXN1-209ENST00000508290 MC3RP41968 323 aa18.23■□□□□ 0.51
SFXN1-209ENST00000508290 MAN2A2P49641 1150 aa18.23■□□□□ 0.51
SFXN1-209ENST00000508290 NNATQ16517 81 aa18.23■□□□□ 0.51
SFXN1-209ENST00000508290 VPS26BQ4G0F5 336 aa18.23■□□□□ 0.51
SFXN1-209ENST00000508290 CYP27C1Q4G0S4 372 aa18.23■□□□□ 0.51
SFXN1-209ENST00000508290 CT45A2Q5DJT8 189 aa18.23■□□□□ 0.51
SFXN1-209ENST00000508290 BEND6Q5SZJ8 279 aaPredicted RBP18.23■□□□□ 0.51
SFXN1-209ENST00000508290 CD163Q86VB7 1156 aa18.23■□□□□ 0.51
SFXN1-209ENST00000508290 PRR22Q8IZ63 422 aa18.23■□□□□ 0.51
SFXN1-209ENST00000508290 HGDQ93099 445 aa18.23■□□□□ 0.51
SFXN1-209ENST00000508290 ELP4Q96EB1 424 aa18.23■□□□□ 0.51
SFXN1-209ENST00000508290 PRPF18Q99633 342 aaKnown RBP18.23■□□□□ 0.51
SFXN1-209ENST00000508290 C3orf14Q9HBI5 128 aa18.23■□□□□ 0.51
SFXN1-209ENST00000508290 ATAD3AQ9NVI7 634 aa18.23■□□□□ 0.51
SFXN1-209ENST00000508290 EIF3LQ9Y262 564 aaKnown RBP18.23■□□□□ 0.51
SFXN1-209ENST00000508290 PEX11AO75192 247 aa18.22■□□□□ 0.51
SFXN1-209ENST00000508290 PDE9AO76083 593 aa18.22■□□□□ 0.51
SFXN1-209ENST00000508290 IL12BP29460 328 aa18.22■□□□□ 0.51
SFXN1-209ENST00000508290 ARRB2P32121 409 aa18.22■□□□□ 0.51
SFXN1-209ENST00000508290 FRKP42685 505 aaPredicted RBP18.22■□□□□ 0.51
SFXN1-209ENST00000508290 PNLIPRP2P54317 469 aa18.22■□□□□ 0.51
SFXN1-209ENST00000508290 PSMD4P55036 377 aaKnown RBP18.22■□□□□ 0.51
SFXN1-209ENST00000508290 ZNF155Q12901 538 aaPredicted RBP18.22■□□□□ 0.51
SFXN1-209ENST00000508290 MLC1Q15049 377 aa18.22■□□□□ 0.51
SFXN1-209ENST00000508290 C6orf136Q5SQH8 315 aa18.22■□□□□ 0.51
SFXN1-209ENST00000508290 HHATQ5VTY9 493 aa18.22■□□□□ 0.51
SFXN1-209ENST00000508290 TMEM107Q6UX40 140 aa18.22■□□□□ 0.51
SFXN1-209ENST00000508290 LIX1Q8N485 282 aa18.22■□□□□ 0.51
SFXN1-209ENST00000508290 FNDC5Q8NAU1 212 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms