RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 ZNF253O75346 499 aa2.69□□□□□ -1.98
LSM6-205ENST00000507449 IGSF6O95976 241 aa2.69□□□□□ -1.98
LSM6-205ENST00000507449 HOXB7P09629 217 aa2.69□□□□□ -1.98
LSM6-205ENST00000507449 ARF4P18085 180 aaPredicted RBP2.69□□□□□ -1.98
LSM6-205ENST00000507449 CALML3P27482 149 aa2.69□□□□□ -1.98
LSM6-205ENST00000507449 CCND2P30279 289 aa2.69□□□□□ -1.98
LSM6-205ENST00000507449 MFAP2P55001 183 aa2.69□□□□□ -1.98
LSM6-205ENST00000507449 ZP4Q12836 540 aa2.69□□□□□ -1.98
LSM6-205ENST00000507449 SMC1AQ14683 1233 aaKnown RBP2.69□□□□□ -1.98
LSM6-205ENST00000507449 LTB4RQ15722 352 aa2.69□□□□□ -1.98
LSM6-205ENST00000507449 PARP6Q2NL67 630 aa2.69□□□□□ -1.98
LSM6-205ENST00000507449 PNCKQ6P2M8 343 aa2.69□□□□□ -1.98
LSM6-205ENST00000507449 LEG1Q6P5S2 330 aa2.69□□□□□ -1.98
LSM6-205ENST00000507449 APOOLQ6UXV4 268 aa2.69□□□□□ -1.98
LSM6-205ENST00000507449 STOX1Q6ZVD7 989 aa2.69□□□□□ -1.98
LSM6-205ENST00000507449 TMUB2Q71RG4 321 aa2.69□□□□□ -1.98
LSM6-205ENST00000507449 GET4Q7L5D6 327 aaPredicted RBP2.69□□□□□ -1.98
LSM6-205ENST00000507449 CERS5Q8N5B7 392 aa2.69□□□□□ -1.98
LSM6-205ENST00000507449 NFAM1Q8NET5 270 aaPredicted RBP2.69□□□□□ -1.98
LSM6-205ENST00000507449 CRYGNQ8WXF5 182 aa2.69□□□□□ -1.98
LSM6-205ENST00000507449 FCGR1BQ92637 280 aa2.69□□□□□ -1.98
LSM6-205ENST00000507449 ADIPOR1Q96A54 375 aa2.69□□□□□ -1.98
LSM6-205ENST00000507449 C1orf147Q96MC9 270 aaPredicted RBP2.69□□□□□ -1.98
LSM6-205ENST00000507449 RANBP9Q96S59 729 aa2.69□□□□□ -1.98
LSM6-205ENST00000507449 WRAP53Q9BUR4 548 aaKnown RBP2.69□□□□□ -1.98
LSM6-205ENST00000507449 NACA2Q9H009 215 aa2.69□□□□□ -1.98
LSM6-205ENST00000507449 ESM1Q9NQ30 184 aa2.69□□□□□ -1.98
LSM6-205ENST00000507449 DHRS4-AS1Q9P1J3 65 aa2.69□□□□□ -1.98
LSM6-205ENST00000507449 ARMCX1Q9P291 453 aa2.69□□□□□ -1.98
LSM6-205ENST00000507449 CIDEBQ9UHD4 219 aa2.69□□□□□ -1.98
LSM6-205ENST00000507449 FOXJ3Q9UPW0 622 aa2.69□□□□□ -1.98
LSM6-205ENST00000507449 RNF24Q9Y225 148 aa2.69□□□□□ -1.98
LSM6-205ENST00000507449 ATP8B3O60423 1300 aa2.68□□□□□ -1.98
LSM6-205ENST00000507449 NCAPD2Q15021 1401 aa2.68□□□□□ -1.98
LSM6-205ENST00000507449 NPIPA5A0A0B4J1W7 369 aa2.68□□□□□ -1.98
LSM6-205ENST00000507449 A0A0J9YVX5 310 aa2.68□□□□□ -1.98
LSM6-205ENST00000507449 FBLL1A6NHQ2 334 aaKnown RBP2.68□□□□□ -1.98
LSM6-205ENST00000507449 ZNF487B1APH4 448 aa2.68□□□□□ -1.98
LSM6-205ENST00000507449 NPIPA5E9PKD4 350 aa2.68□□□□□ -1.98
LSM6-205ENST00000507449 LGALS8O00214 317 aa2.68□□□□□ -1.98
LSM6-205ENST00000507449 CFLARO15519 480 aa2.68□□□□□ -1.98
LSM6-205ENST00000507449 GOT2P00505 430 aaKnown RBP2.68□□□□□ -1.98
LSM6-205ENST00000507449 ACADSP16219 412 aa2.68□□□□□ -1.98
LSM6-205ENST00000507449 PPP2R1BP30154 601 aa2.68□□□□□ -1.98
LSM6-205ENST00000507449 HMGCLP35914 325 aa2.68□□□□□ -1.98
LSM6-205ENST00000507449 LMO4P61968 165 aa2.68□□□□□ -1.98
LSM6-205ENST00000507449 MRPS6P82932 125 aaKnown RBP2.68□□□□□ -1.98
LSM6-205ENST00000507449 DPYSQ14117 519 aa2.68□□□□□ -1.98
LSM6-205ENST00000507449 ABRAXAS2Q15018 415 aa2.68□□□□□ -1.98
LSM6-205ENST00000507449 MS4A13Q5J8X5 152 aa2.68□□□□□ -1.98
LSM6-205ENST00000507449 DMKNQ6E0U4 476 aaPredicted RBP2.68□□□□□ -1.98
LSM6-205ENST00000507449 ABRAXAS1Q6UWZ7 409 aa2.68□□□□□ -1.98
LSM6-205ENST00000507449 ZNF562Q6V9R5 426 aa2.68□□□□□ -1.98
LSM6-205ENST00000507449 HACD2Q6Y1H2 254 aa2.68□□□□□ -1.98
LSM6-205ENST00000507449 ERASQ7Z444 233 aa2.68□□□□□ -1.98
LSM6-205ENST00000507449 ZNF671Q8TAW3 534 aa2.68□□□□□ -1.98
LSM6-205ENST00000507449 SELENOMQ8WWX9 145 aa2.68□□□□□ -1.98
LSM6-205ENST00000507449 TOMM40LQ969M1 308 aa2.68□□□□□ -1.98
LSM6-205ENST00000507449 C11orf24Q96F05 449 aaPredicted RBP2.68□□□□□ -1.98
LSM6-205ENST00000507449 PIWIL1Q96J94 861 aaKnown RBP2.68□□□□□ -1.98
LSM6-205ENST00000507449 TESK2Q96S53 571 aa2.68□□□□□ -1.98
LSM6-205ENST00000507449 TSPAN18Q96SJ8 248 aa2.68□□□□□ -1.98
LSM6-205ENST00000507449 RBM24Q9BX46 236 aaKnown RBP2.68□□□□□ -1.98
LSM6-205ENST00000507449 PUS3Q9BZE2 481 aaKnown RBP2.68□□□□□ -1.98
LSM6-205ENST00000507449 ZBP1Q9H171 429 aa2.68□□□□□ -1.98
LSM6-205ENST00000507449 LIN28AQ9H9Z2 209 aaKnown RBP2.68□□□□□ -1.98
LSM6-205ENST00000507449 ELL3Q9HB65 397 aaPredicted RBP2.68□□□□□ -1.98
LSM6-205ENST00000507449 AMBNQ9NP70 447 aa2.68□□□□□ -1.98
LSM6-205ENST00000507449 ABCC13Q9NSE7 274 aa2.68□□□□□ -1.98
LSM6-205ENST00000507449 HPF1Q9NWY4 346 aa2.68□□□□□ -1.98
LSM6-205ENST00000507449 GDAP2Q9NXN4 497 aa2.68□□□□□ -1.98
LSM6-205ENST00000507449 CLEC5AQ9NY25 188 aa2.68□□□□□ -1.98
LSM6-205ENST00000507449 ZNF581Q9P0T4 197 aa2.68□□□□□ -1.98
LSM6-205ENST00000507449 ATXN10Q9UBB4 475 aa2.68□□□□□ -1.98
LSM6-205ENST00000507449 SLC9A8Q9Y2E8 581 aa2.68□□□□□ -1.98
LSM6-205ENST00000507449 FKBP7Q9Y680 259 aa2.68□□□□□ -1.98
LSM6-205ENST00000507449 PARD3Q8TEW0 1356 aa2.68□□□□□ -1.98
LSM6-205ENST00000507449 COL5A2P05997 1499 aaPredicted RBP2.68□□□□□ -1.98
LSM6-205ENST00000507449 METP08581 1390 aa2.67□□□□□ -1.98
LSM6-205ENST00000507449 FAM230AA0A1W2PPH8 454 aa2.67□□□□□ -1.98
LSM6-205ENST00000507449 A0A1W2PQ72 361 aa2.67□□□□□ -1.98
LSM6-205ENST00000507449 ZNF840PA6NDX5 716 aa2.67□□□□□ -1.98
LSM6-205ENST00000507449 MFSD2BA6NFX1 497 aa2.67□□□□□ -1.98
LSM6-205ENST00000507449 KRTAP9-6A8MVA2 160 aa2.67□□□□□ -1.98
LSM6-205ENST00000507449 K7EPI3 171 aa2.67□□□□□ -1.98
LSM6-205ENST00000507449 SAP18O00422 153 aaKnown RBP2.67□□□□□ -1.98
LSM6-205ENST00000507449 ALOX15BO15296 676 aa2.67□□□□□ -1.98
LSM6-205ENST00000507449 LRRTM2O43300 516 aa2.67□□□□□ -1.98
LSM6-205ENST00000507449 TYROBPO43914 113 aa2.67□□□□□ -1.98
LSM6-205ENST00000507449 ZNF354AO60765 605 aaPredicted RBP2.67□□□□□ -1.98
LSM6-205ENST00000507449 DIRAS3O95661 229 aa2.67□□□□□ -1.98
LSM6-205ENST00000507449 CA3P07451 260 aa2.67□□□□□ -1.98
LSM6-205ENST00000507449 GSTA1P08263 222 aa2.67□□□□□ -1.98
LSM6-205ENST00000507449 FAM200BP0CF97 657 aa2.67□□□□□ -1.98
LSM6-205ENST00000507449 HSD17B1P14061 328 aa2.67□□□□□ -1.98
LSM6-205ENST00000507449 TSPAN8P19075 237 aa2.67□□□□□ -1.98
LSM6-205ENST00000507449 IGFBP5P24593 272 aa2.67□□□□□ -1.98
LSM6-205ENST00000507449 ELK3P41970 407 aa2.67□□□□□ -1.98
LSM6-205ENST00000507449 HTR5AP47898 357 aa2.67□□□□□ -1.98
LSM6-205ENST00000507449 ARHGDIAP52565 204 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms