RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 MIEF1Q9NQG6 463 aa2.76□□□□□ -1.97
CHD1-203ENST00000505657 HPS4Q9NQG7 708 aa2.76□□□□□ -1.97
CHD1-203ENST00000505657 COMMD8Q9NX08 183 aa2.76□□□□□ -1.97
CHD1-203ENST00000505657 LHX3Q9UBR4 397 aa2.76□□□□□ -1.97
CHD1-203ENST00000505657 SLC2A6Q9UGQ3 507 aa2.76□□□□□ -1.97
CHD1-203ENST00000505657 ABCC9O60706 1549 aa2.76□□□□□ -1.97
CHD1-203ENST00000505657 TDRD6O60522 2096 aaKnown RBP2.76□□□□□ -1.97
CHD1-203ENST00000505657 ZMYM6O95789 1325 aa2.75□□□□□ -1.97
CHD1-203ENST00000505657 E7ENQ6 273 aa2.75□□□□□ -1.97
CHD1-203ENST00000505657 H3BMH7 237 aa2.75□□□□□ -1.97
CHD1-203ENST00000505657 ARPC1BO15143 372 aaKnown RBP2.75□□□□□ -1.97
CHD1-203ENST00000505657 GPAA1O43292 621 aa2.75□□□□□ -1.97
CHD1-203ENST00000505657 TYROBPO43914 113 aa2.75□□□□□ -1.97
CHD1-203ENST00000505657 NME2P1O60361 137 aa2.75□□□□□ -1.97
CHD1-203ENST00000505657 SDC3O75056 442 aa2.75□□□□□ -1.97
CHD1-203ENST00000505657 SLC2A10O95528 541 aa2.75□□□□□ -1.97
CHD1-203ENST00000505657 HOXB7P09629 217 aa2.75□□□□□ -1.97
CHD1-203ENST00000505657 P0C879 139 aa2.75□□□□□ -1.97
CHD1-203ENST00000505657 ZNF18P17022 549 aa2.75□□□□□ -1.97
CHD1-203ENST00000505657 ZBTB25P24278 435 aa2.75□□□□□ -1.97
CHD1-203ENST00000505657 CASP9P55211 416 aa2.75□□□□□ -1.97
CHD1-203ENST00000505657 ERVPABLB-1P60509 514 aa2.75□□□□□ -1.97
CHD1-203ENST00000505657 AP1B1Q10567 949 aa2.75□□□□□ -1.97
CHD1-203ENST00000505657 PPP1R8Q12972 351 aaKnown RBP2.75□□□□□ -1.97
CHD1-203ENST00000505657 TSTA3Q13630 321 aaPredicted RBP2.75□□□□□ -1.97
CHD1-203ENST00000505657 ZIC1Q15915 447 aa2.75□□□□□ -1.97
CHD1-203ENST00000505657 SHROOM1Q2M3G4 852 aaPredicted RBP2.75□□□□□ -1.97
CHD1-203ENST00000505657 QRICH1Q2TAL8 776 aa2.75□□□□□ -1.97
CHD1-203ENST00000505657 C2orf76Q3KRA6 126 aa2.75□□□□□ -1.97
CHD1-203ENST00000505657 DPY19L2P2Q6ZN68 376 aa2.75□□□□□ -1.97
CHD1-203ENST00000505657 C1orf186Q6ZWK4 172 aa2.75□□□□□ -1.97
CHD1-203ENST00000505657 ADAMTSL2Q86TH1 951 aa2.75□□□□□ -1.97
CHD1-203ENST00000505657 YRDCQ86U90 279 aaKnown RBP2.75□□□□□ -1.97
CHD1-203ENST00000505657 PEX5LQ8IYB4 626 aa2.75□□□□□ -1.97
CHD1-203ENST00000505657 GPR65Q8IYL9 337 aa2.75□□□□□ -1.97
CHD1-203ENST00000505657 UBQLNLQ8IYU4 475 aa2.75□□□□□ -1.97
CHD1-203ENST00000505657 MLKLQ8NB16 471 aa2.75□□□□□ -1.97
CHD1-203ENST00000505657 ZNF397Q8NF99 534 aaPredicted RBP2.75□□□□□ -1.97
CHD1-203ENST00000505657 OR52E1Q8NGJ3 308 aa2.75□□□□□ -1.97
CHD1-203ENST00000505657 OR52J3Q8NH60 311 aa2.75□□□□□ -1.97
CHD1-203ENST00000505657 DLX4Q92988 240 aaPredicted RBP2.75□□□□□ -1.97
CHD1-203ENST00000505657 NUS1Q96E22 293 aa2.75□□□□□ -1.97
CHD1-203ENST00000505657 C11orf24Q96F05 449 aaPredicted RBP2.75□□□□□ -1.97
CHD1-203ENST00000505657 CASD1Q96PB1 797 aa2.75□□□□□ -1.97
CHD1-203ENST00000505657 SIRPDQ9H106 197 aa2.75□□□□□ -1.97
CHD1-203ENST00000505657 PURGQ9UJV8 347 aaKnown RBP2.75□□□□□ -1.97
CHD1-203ENST00000505657 APPL1Q9UKG1 709 aa2.75□□□□□ -1.97
CHD1-203ENST00000505657 NTNG1Q9Y2I2 539 aa2.75□□□□□ -1.97
CHD1-203ENST00000505657 TDRKHQ9Y2W6 561 aaKnown RBP2.75□□□□□ -1.97
CHD1-203ENST00000505657 NPIPA5A0A0B4J1W7 369 aa2.74□□□□□ -1.97
CHD1-203ENST00000505657 A0A0J9YVX5 310 aa2.74□□□□□ -1.97
CHD1-203ENST00000505657 NPIPA5E9PKD4 350 aa2.74□□□□□ -1.97
CHD1-203ENST00000505657 G3V3Y1 287 aa2.74□□□□□ -1.97
CHD1-203ENST00000505657 PDLIM1O00151 329 aa2.74□□□□□ -1.97
CHD1-203ENST00000505657 ADAM12O43184 909 aa2.74□□□□□ -1.97
CHD1-203ENST00000505657 APRTP07741 180 aa2.74□□□□□ -1.97
CHD1-203ENST00000505657 CT45A10P0DMU9 189 aa2.74□□□□□ -1.97
CHD1-203ENST00000505657 GNSP15586 552 aa2.74□□□□□ -1.97
CHD1-203ENST00000505657 RFC2P35250 354 aa2.74□□□□□ -1.97
CHD1-203ENST00000505657 ATP6V1E1P36543 226 aa2.74□□□□□ -1.97
CHD1-203ENST00000505657 ALDH3B2P48448 385 aa2.74□□□□□ -1.97
CHD1-203ENST00000505657 YBEYP58557 167 aaPredicted RBP2.74□□□□□ -1.97
CHD1-203ENST00000505657 BTG3Q14201 252 aaPredicted RBP2.74□□□□□ -1.97
CHD1-203ENST00000505657 SMC1AQ14683 1233 aaKnown RBP2.74□□□□□ -1.97
CHD1-203ENST00000505657 TTC31Q49AM3 519 aaPredicted RBP2.74□□□□□ -1.97
CHD1-203ENST00000505657 PRR5LQ6MZQ0 368 aa2.74□□□□□ -1.97
CHD1-203ENST00000505657 ZNF544Q6NX49 715 aa2.74□□□□□ -1.97
CHD1-203ENST00000505657 C2orf66Q6UXQ4 117 aa2.74□□□□□ -1.97
CHD1-203ENST00000505657 SLC34A3Q8N130 599 aa2.74□□□□□ -1.97
CHD1-203ENST00000505657 GPR137CQ8N3F9 429 aa2.74□□□□□ -1.97
CHD1-203ENST00000505657 Q8N7P7 452 aa2.74□□□□□ -1.97
CHD1-203ENST00000505657 ZNF564Q8TBZ8 553 aaPredicted RBP2.74□□□□□ -1.97
CHD1-203ENST00000505657 DNAJA3Q96EY1 480 aa2.74□□□□□ -1.97
CHD1-203ENST00000505657 C9orf85Q96MD7 179 aa2.74□□□□□ -1.97
CHD1-203ENST00000505657 CCDC43Q96MW1 224 aaKnown RBP2.74□□□□□ -1.97
CHD1-203ENST00000505657 ACAT2Q9BWD1 397 aa2.74□□□□□ -1.97
CHD1-203ENST00000505657 TEX13AQ9BXU3 409 aaPredicted RBP2.74□□□□□ -1.97
CHD1-203ENST00000505657 DBNDD1Q9H9R9 158 aa2.74□□□□□ -1.97
CHD1-203ENST00000505657 PLSCR3Q9NRY6 295 aa2.74□□□□□ -1.97
CHD1-203ENST00000505657 SENP1Q9P0U3 644 aa2.74□□□□□ -1.97
CHD1-203ENST00000505657 HMG20BQ9P0W2 317 aa2.74□□□□□ -1.97
CHD1-203ENST00000505657 MBD2Q9UBB5 411 aa2.74□□□□□ -1.97
CHD1-203ENST00000505657 RPGRIP1LQ68CZ1 1315 aa2.73□□□□□ -1.97
CHD1-203ENST00000505657 RAD54L2Q9Y4B4 1467 aa2.73□□□□□ -1.97
CHD1-203ENST00000505657 A0A1W2PNU3 283 aaPredicted RBP2.73□□□□□ -1.97
CHD1-203ENST00000505657 SLC17A2O00624 439 aa2.73□□□□□ -1.97
CHD1-203ENST00000505657 TNFSF11O14788 317 aa2.73□□□□□ -1.97
CHD1-203ENST00000505657 CFLARO15519 480 aa2.73□□□□□ -1.97
CHD1-203ENST00000505657 KERAO60938 352 aa2.73□□□□□ -1.97
CHD1-203ENST00000505657 STK17BO94768 372 aa2.73□□□□□ -1.97
CHD1-203ENST00000505657 IGSF6O95976 241 aa2.73□□□□□ -1.97
CHD1-203ENST00000505657 PNPP00491 289 aa2.73□□□□□ -1.97
CHD1-203ENST00000505657 TMOD1P28289 359 aa2.73□□□□□ -1.97
CHD1-203ENST00000505657 ARF5P84085 180 aa2.73□□□□□ -1.97
CHD1-203ENST00000505657 UBXN1Q04323 297 aa2.73□□□□□ -1.97
CHD1-203ENST00000505657 ASAH1Q13510 395 aa2.73□□□□□ -1.97
CHD1-203ENST00000505657 KIAA0040Q15053 153 aa2.73□□□□□ -1.97
CHD1-203ENST00000505657 CDC37Q16543 378 aaPredicted RBP2.73□□□□□ -1.97
CHD1-203ENST00000505657 AGKQ53H12 422 aa2.73□□□□□ -1.97
CHD1-203ENST00000505657 HERC4Q5GLZ8 1057 aaPredicted RBP2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms