RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 PCNX2A6NKB5 2137 aa9.46□□□□□ -0.89
DDX41-203ENST00000504781 CEP295Q9C0D2 2601 aa9.46□□□□□ -0.89
DDX41-203ENST00000504781 IGKV3D-11A0A0A0MRZ8 115 aa9.46□□□□□ -0.9
DDX41-203ENST00000504781 VSTM2BA6NLU5 285 aa9.46□□□□□ -0.9
DDX41-203ENST00000504781 MEN1O00255 615 aa9.46□□□□□ -0.9
DDX41-203ENST00000504781 RFPL3O75679 317 aa9.46□□□□□ -0.9
DDX41-203ENST00000504781 ZNF682O95780 498 aa9.46□□□□□ -0.9
DDX41-203ENST00000504781 CST1P01037 141 aa9.46□□□□□ -0.9
DDX41-203ENST00000504781 SEMG1P04279 462 aa9.46□□□□□ -0.9
DDX41-203ENST00000504781 IFNA16P05015 189 aa9.46□□□□□ -0.9
DDX41-203ENST00000504781 MAGEA2P43356 314 aa9.46□□□□□ -0.9
DDX41-203ENST00000504781 KCNJ10P78508 379 aa9.46□□□□□ -0.9
DDX41-203ENST00000504781 MRPS35P82673 323 aaKnown RBP9.46□□□□□ -0.9
DDX41-203ENST00000504781 RHAGQ02094 409 aa9.46□□□□□ -0.9
DDX41-203ENST00000504781 TRIP10Q15642 601 aa9.46□□□□□ -0.9
DDX41-203ENST00000504781 ZNHIT3Q15649 155 aaPredicted RBP9.46□□□□□ -0.9
DDX41-203ENST00000504781 MAPK11Q15759 364 aa9.46□□□□□ -0.9
DDX41-203ENST00000504781 SYPL1Q16563 259 aa9.46□□□□□ -0.9
DDX41-203ENST00000504781 LRRC23Q53EV4 343 aaPredicted RBP9.46□□□□□ -0.9
DDX41-203ENST00000504781 CCDC157Q569K6 752 aa9.46□□□□□ -0.9
DDX41-203ENST00000504781 ARHGAP40Q5TG30 622 aa9.46□□□□□ -0.9
DDX41-203ENST00000504781 PRAMEF17Q5VTA0 474 aa9.46□□□□□ -0.9
DDX41-203ENST00000504781 CDCP2Q5VXM1 449 aa9.46□□□□□ -0.9
DDX41-203ENST00000504781 HMBOX1Q6NT76 420 aa9.46□□□□□ -0.9
DDX41-203ENST00000504781 PPP4R4Q6NUP7 873 aa9.46□□□□□ -0.9
DDX41-203ENST00000504781 ZBTB49Q6ZSB9 765 aa9.46□□□□□ -0.9
DDX41-203ENST00000504781 SZRD1Q7Z422 152 aa9.46□□□□□ -0.9
DDX41-203ENST00000504781 ZDHHC21Q8IVQ6 265 aa9.46□□□□□ -0.9
DDX41-203ENST00000504781 GALNT12Q8IXK2 581 aa9.46□□□□□ -0.9
DDX41-203ENST00000504781 CACTIN-AS1Q8N1I8 211 aa9.46□□□□□ -0.9
DDX41-203ENST00000504781 PACRGLQ8N7B6 248 aa9.46□□□□□ -0.9
DDX41-203ENST00000504781 SLC38A9Q8NBW4 561 aa9.46□□□□□ -0.9
DDX41-203ENST00000504781 SLC16A11Q8NCK7 471 aa9.46□□□□□ -0.9
DDX41-203ENST00000504781 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.46□□□□□ -0.9
DDX41-203ENST00000504781 GATA6Q92908 595 aa9.46□□□□□ -0.9
DDX41-203ENST00000504781 EME1Q96AY2 570 aa9.46□□□□□ -0.9
DDX41-203ENST00000504781 NRBF2Q96F24 287 aa9.46□□□□□ -0.9
DDX41-203ENST00000504781 TMEM19Q96HH6 336 aa9.46□□□□□ -0.9
DDX41-203ENST00000504781 C7orf34Q96L11 122 aa9.46□□□□□ -0.9
DDX41-203ENST00000504781 ART5Q96L15 291 aa9.46□□□□□ -0.9
DDX41-203ENST00000504781 ZNF347Q96SE7 839 aa9.46□□□□□ -0.9
DDX41-203ENST00000504781 TREX2Q9BQ50 279 aaPredicted RBP9.46□□□□□ -0.9
DDX41-203ENST00000504781 C9orf16Q9BUW7 83 aa9.46□□□□□ -0.9
DDX41-203ENST00000504781 TMEM121BQ9BXQ6 578 aaPredicted RBP9.46□□□□□ -0.9
DDX41-203ENST00000504781 SAP130Q9H0E3 1048 aa9.46□□□□□ -0.9
DDX41-203ENST00000504781 SERHL2Q9H4I8 314 aa9.46□□□□□ -0.9
DDX41-203ENST00000504781 EVA1AQ9H8M9 152 aa9.46□□□□□ -0.9
DDX41-203ENST00000504781 TRIM45Q9H8W5 580 aaPredicted RBP9.46□□□□□ -0.9
DDX41-203ENST00000504781 SLC39A1Q9NY26 324 aa9.46□□□□□ -0.9
DDX41-203ENST00000504781 PRODH2Q9UF12 536 aa9.46□□□□□ -0.9
DDX41-203ENST00000504781 SATB2Q9UPW6 733 aa9.46□□□□□ -0.9
DDX41-203ENST00000504781 PADI2Q9Y2J8 665 aa9.46□□□□□ -0.9
DDX41-203ENST00000504781 IFT52Q9Y366 437 aa9.46□□□□□ -0.9
DDX41-203ENST00000504781 MSRB2Q9Y3D2 182 aa9.46□□□□□ -0.9
DDX41-203ENST00000504781 GPC6Q9Y625 555 aaPredicted RBP9.46□□□□□ -0.9
DDX41-203ENST00000504781 TCRBV16S1A1N1A0A5B0 115 aa9.45□□□□□ -0.9
DDX41-203ENST00000504781 PRAMEF27A3QJZ7 478 aa9.45□□□□□ -0.9
DDX41-203ENST00000504781 TMEM8BA6NDV4 472 aa9.45□□□□□ -0.9
DDX41-203ENST00000504781 TMEM229AB2RXF0 380 aa9.45□□□□□ -0.9
DDX41-203ENST00000504781 TGFBR3LH3BV60 316 aa9.45□□□□□ -0.9
DDX41-203ENST00000504781 GNGT2O14610 69 aa9.45□□□□□ -0.9
DDX41-203ENST00000504781 PCDH17O14917 1159 aa9.45□□□□□ -0.9
DDX41-203ENST00000504781 PRAMEF2O60811 474 aa9.45□□□□□ -0.9
DDX41-203ENST00000504781 CPNE3O75131 537 aaKnown RBP9.45□□□□□ -0.9
DDX41-203ENST00000504781 NKX2-2O95096 273 aa9.45□□□□□ -0.9
DDX41-203ENST00000504781 RECKO95980 971 aa9.45□□□□□ -0.9
DDX41-203ENST00000504781 FABP3P05413 133 aa9.45□□□□□ -0.9
DDX41-203ENST00000504781 BCHEP06276 602 aa9.45□□□□□ -0.9
DDX41-203ENST00000504781 CT62P0C5K7 136 aa9.45□□□□□ -0.9
DDX41-203ENST00000504781 ZGLP1P0C6A0 271 aa9.45□□□□□ -0.9
DDX41-203ENST00000504781 ACADSP16219 412 aa9.45□□□□□ -0.9
DDX41-203ENST00000504781 ZNF26P17031 533 aaPredicted RBP9.45□□□□□ -0.9
DDX41-203ENST00000504781 MAOAP21397 527 aa9.45□□□□□ -0.9
DDX41-203ENST00000504781 KCNJ5P48544 419 aa9.45□□□□□ -0.9
DDX41-203ENST00000504781 EMDP50402 254 aa9.45□□□□□ -0.9
DDX41-203ENST00000504781 ARHGDIAP52565 204 aa9.45□□□□□ -0.9
DDX41-203ENST00000504781 CRYBA2P53672 197 aa9.45□□□□□ -0.9
DDX41-203ENST00000504781 RAB15P59190 212 aa9.45□□□□□ -0.9
DDX41-203ENST00000504781 RPS26P62854 115 aaKnown RBP9.45□□□□□ -0.9
DDX41-203ENST00000504781 KCNC4Q03721 635 aa9.45□□□□□ -0.9
DDX41-203ENST00000504781 EIF3IQ13347 325 aaKnown RBP9.45□□□□□ -0.9
DDX41-203ENST00000504781 GK3PQ14409 553 aa9.45□□□□□ -0.9
DDX41-203ENST00000504781 ZNF267Q14586 743 aaPredicted RBP9.45□□□□□ -0.9
DDX41-203ENST00000504781 ELAVL1Q15717 326 aaKnown RBP9.45□□□□□ -0.9
DDX41-203ENST00000504781 NSDHLQ15738 373 aa9.45□□□□□ -0.9
DDX41-203ENST00000504781 GPAT3Q53EU6 434 aa9.45□□□□□ -0.9
DDX41-203ENST00000504781 IFI44LQ53G44 452 aa9.45□□□□□ -0.9
DDX41-203ENST00000504781 VWA2Q5GFL6 755 aa9.45□□□□□ -0.9
DDX41-203ENST00000504781 DCAF12Q5T6F0 453 aa9.45□□□□□ -0.9
DDX41-203ENST00000504781 C1orf189Q5VU69 101 aa9.45□□□□□ -0.9
DDX41-203ENST00000504781 LPCAT4Q643R3 524 aa9.45□□□□□ -0.9
DDX41-203ENST00000504781 ZNF385CQ66K41 422 aaPredicted RBP9.45□□□□□ -0.9
DDX41-203ENST00000504781 C16orf62Q7Z3J2 963 aa9.45□□□□□ -0.9
DDX41-203ENST00000504781 B3GNT8Q7Z7M8 397 aa9.45□□□□□ -0.9
DDX41-203ENST00000504781 SHISA5Q8N114 240 aa9.45□□□□□ -0.9
DDX41-203ENST00000504781 SVOPLQ8N434 492 aa9.45□□□□□ -0.9
DDX41-203ENST00000504781 FAM86B1Q8N7N1 296 aa9.45□□□□□ -0.9
DDX41-203ENST00000504781 KDF1Q8NAX2 398 aaPredicted RBP9.45□□□□□ -0.9
DDX41-203ENST00000504781 MORN4Q8NDC4 146 aa9.45□□□□□ -0.9
DDX41-203ENST00000504781 ICA1LQ8NDH6 482 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms