RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 UGT2B11O75310 529 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 SH3BGRLO75368 114 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 TNFRSF21O75509 655 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 PRKRAO75569 313 aaKnown RBP5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 CBX7O95931 251 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 OTCP00480 354 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 KLK1P06870 262 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 RPS17P08708 135 aaKnown RBP5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 CT45A8P0DMV1 189 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 CT45A9P0DMV2 189 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 CD8BP10966 210 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 PEPDP12955 493 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 FPR1P21462 350 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 CRYGSP22914 178 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 CNTFP26441 200 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 TYK2P29597 1187 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 PHBP35232 272 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 EMDP50402 254 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 SERPINB8P50452 374 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 LHX2P50458 406 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 NEK2P51955 445 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 CCNG1P51959 295 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 MAPK12P53778 367 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 GAS1P54826 345 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 DSCR4P56555 118 aaPredicted RBP5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 CLDN18P56856 261 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 EEFSECP57772 596 aaKnown RBP5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 NAA20P61599 178 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 NKX6-1P78426 367 aaPredicted RBP5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 HMGCS1Q01581 520 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 LTBQ06643 244 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 PLCXD2Q0VAA5 305 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 IFT88Q13099 833 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 EFR3AQ14156 821 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 EIPR1Q53HC9 387 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 CT45A2Q5DJT8 189 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 ZNF628Q5EBL2 1059 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 WIPI1Q5MNZ9 446 aaPredicted RBP5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 DCST1Q5T197 706 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 BICRALQ6AI39 1079 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 GALNT18Q6P9A2 607 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 ZDHHC24Q6UX98 284 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 ANGPTL8Q6UXH0 198 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 C20orf204Q6ZNR8 217 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 MYLK4Q86YV6 388 aaPredicted RBP5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 TRIM42Q8IWZ5 723 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 HOMEZQ8IX15 550 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 MMP21Q8N119 569 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 RNF175Q8N4F7 328 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 C9orf106Q8NAJ2 232 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 SIMC1Q8NDZ2 872 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 WFDC11Q8NEX6 87 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 OR52B6Q8NGF0 335 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 LINC01560Q8TB33 94 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 FBXO25Q8TCJ0 367 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 KCTD4Q8WVF5 259 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 IGFBPL1Q8WX77 278 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 EXT2Q93063 718 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 ATP6V1E2Q96A05 226 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 TM4SF18Q96CE8 201 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 OMA1Q96E52 524 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 C11orf24Q96F05 449 aaPredicted RBP5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 CNRIP1Q96F85 164 aaPredicted RBP5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 COX4I2Q96KJ9 171 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 COL21A1Q96P44 957 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 NODALQ96S42 347 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 TUBA1CQ9BQE3 449 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 YIPF4Q9BSR8 244 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 G6PC3Q9BUM1 346 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 FAIM2Q9BWQ8 316 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 OR10A4Q9H209 315 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 ELOVL6Q9H5J4 265 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 ACSS3Q9H6R3 686 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 NOL11Q9H8H0 719 aaKnown RBP5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 METTL7AQ9H8H3 244 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 ZBTB26Q9HCK0 441 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 TRMT1Q9NXH9 659 aaKnown RBP5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 GALNT8Q9NY28 637 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 ZNF226Q9NYT6 803 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 TAS2R7Q9NYW3 318 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 EHD3Q9NZN3 535 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 TRPS1Q9UHF7 1281 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 MCM8Q9UJA3 840 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 ZNF180Q9UJW8 692 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 SNX6Q9UNH7 406 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 ABCG2Q9UNQ0 655 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 EIF3LQ9Y262 564 aaKnown RBP5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 DTX4Q9Y2E6 619 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 STK38LQ9Y2H1 464 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 ZNF175Q9Y473 711 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 WIF1Q9Y5W5 379 aa5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 NSD1Q96L73 2696 aaPredicted RBP5.54□□□□□ -1.52
LSM3P4-201ENST00000502948 DSCAMO60469 2012 aa5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 HEATR5AQ86XA9 2040 aa5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 A0A087WV62 115 aa5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 A0A1W2PNV4 684 aa5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 A0A1W2PPR1 153 aa5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 A0A1W2PS29 197 aa5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 PRAMEF25A6NGN4 478 aa5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 LRRC14BA6NHZ5 514 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms