RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 KRTAP4-9Q9BYQ8 210 aa4.48□□□□□ -1.69
HMGB1P3-201ENST00000502802 POLR1EQ9GZS1 481 aaKnown RBP4.48□□□□□ -1.69
HMGB1P3-201ENST00000502802 KAT8Q9H7Z6 458 aaKnown RBP4.48□□□□□ -1.69
HMGB1P3-201ENST00000502802 IL1RAPQ9NPH3 570 aa4.48□□□□□ -1.69
HMGB1P3-201ENST00000502802 TRPV5Q9NQA5 729 aa4.48□□□□□ -1.69
HMGB1P3-201ENST00000502802 FZR1Q9UM11 496 aa4.48□□□□□ -1.69
HMGB1P3-201ENST00000502802 MRPS28Q9Y2Q9 187 aaKnown RBP4.48□□□□□ -1.69
HMGB1P3-201ENST00000502802 KLF2Q9Y5W3 355 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P3-201ENST00000502802 UBR1Q8IWV7 1749 aa4.48□□□□□ -1.69
HMGB1P3-201ENST00000502802 XIRP1Q702N8 1843 aaKnown RBP4.48□□□□□ -1.69
HMGB1P3-201ENST00000502802 PZPP20742 1482 aa4.48□□□□□ -1.69
HMGB1P3-201ENST00000502802 SF3B1O75533 1304 aaKnown RBP eCLIP4.47□□□□□ -1.69
HMGB1P3-201ENST00000502802 DEPDC5O75140 1603 aa4.47□□□□□ -1.69
HMGB1P3-201ENST00000502802 PTPN23Q9H3S7 1636 aa4.47□□□□□ -1.69
HMGB1P3-201ENST00000502802 MYO5BQ9ULV0 1848 aa4.47□□□□□ -1.69
HMGB1P3-201ENST00000502802 ZNF724A8MTY0 619 aa4.47□□□□□ -1.69
HMGB1P3-201ENST00000502802 G3V2L1 256 aa4.47□□□□□ -1.69
HMGB1P3-201ENST00000502802 FBP2O00757 339 aa4.47□□□□□ -1.69
HMGB1P3-201ENST00000502802 SDHDO14521 159 aa4.47□□□□□ -1.69
HMGB1P3-201ENST00000502802 MAGEB3O15480 346 aa4.47□□□□□ -1.69
HMGB1P3-201ENST00000502802 RIPK2O43353 540 aa4.47□□□□□ -1.69
HMGB1P3-201ENST00000502802 SPAG6O75602 509 aa4.47□□□□□ -1.69
HMGB1P3-201ENST00000502802 NXPH4O95158 308 aa4.47□□□□□ -1.69
HMGB1P3-201ENST00000502802 MBD3O95983 291 aa4.47□□□□□ -1.69
HMGB1P3-201ENST00000502802 GOT2P00505 430 aaKnown RBP4.47□□□□□ -1.69
HMGB1P3-201ENST00000502802 AMBPP02760 352 aa4.47□□□□□ -1.69
HMGB1P3-201ENST00000502802 SLC35G4P0C7Q5 338 aa4.47□□□□□ -1.69
HMGB1P3-201ENST00000502802 CLUP10909 449 aa4.47□□□□□ -1.69
HMGB1P3-201ENST00000502802 SELEP16581 610 aa4.47□□□□□ -1.69
HMGB1P3-201ENST00000502802 OTX2P32243 289 aa4.47□□□□□ -1.69
HMGB1P3-201ENST00000502802 DLSTP36957 453 aa4.47□□□□□ -1.69
HMGB1P3-201ENST00000502802 PEX3P56589 373 aa4.47□□□□□ -1.69
HMGB1P3-201ENST00000502802 ACTR1AP61163 376 aa4.47□□□□□ -1.69
HMGB1P3-201ENST00000502802 RPS27AP62979 156 aaKnown RBP4.47□□□□□ -1.69
HMGB1P3-201ENST00000502802 NUCB2P80303 420 aa4.47□□□□□ -1.69
HMGB1P3-201ENST00000502802 KIAA0141Q14154 515 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P3-201ENST00000502802 KNOP1Q1ED39 458 aaKnown RBP4.47□□□□□ -1.69
HMGB1P3-201ENST00000502802 ASPHD2Q6ICH7 369 aa4.47□□□□□ -1.69
HMGB1P3-201ENST00000502802 KIF6Q6ZMV9 814 aa4.47□□□□□ -1.69
HMGB1P3-201ENST00000502802 LPCAT2Q7L5N7 544 aa4.47□□□□□ -1.69
HMGB1P3-201ENST00000502802 OR52B6Q8NGF0 335 aa4.47□□□□□ -1.69
HMGB1P3-201ENST00000502802 OR1K1Q8NGR3 316 aa4.47□□□□□ -1.69
HMGB1P3-201ENST00000502802 OR4F5Q8NH21 305 aa4.47□□□□□ -1.69
HMGB1P3-201ENST00000502802 HPDLQ96IR7 371 aa4.47□□□□□ -1.69
HMGB1P3-201ENST00000502802 C4orf36Q96KX1 117 aa4.47□□□□□ -1.69
HMGB1P3-201ENST00000502802 TTC25Q96NG3 672 aa4.47□□□□□ -1.69
HMGB1P3-201ENST00000502802 CPXM1Q96SM3 734 aa4.47□□□□□ -1.69
HMGB1P3-201ENST00000502802 ALG9Q9H6U8 611 aa4.47□□□□□ -1.69
HMGB1P3-201ENST00000502802 LPAR2Q9HBW0 351 aa4.47□□□□□ -1.69
HMGB1P3-201ENST00000502802 NRN1Q9NPD7 142 aa4.47□□□□□ -1.69
HMGB1P3-201ENST00000502802 RDH8Q9NYR8 311 aa4.47□□□□□ -1.69
HMGB1P3-201ENST00000502802 CHRNA9Q9UGM1 479 aa4.47□□□□□ -1.69
HMGB1P3-201ENST00000502802 IKZF3Q9UKT9 509 aa4.47□□□□□ -1.69
HMGB1P3-201ENST00000502802 B9D1Q9UPM9 204 aa4.47□□□□□ -1.69
HMGB1P3-201ENST00000502802 RNF115Q9Y4L5 304 aa4.47□□□□□ -1.69
HMGB1P3-201ENST00000502802 DDX49Q9Y6V7 483 aaKnown RBP4.47□□□□□ -1.69
HMGB1P3-201ENST00000502802 TNRQ92752 1358 aa4.47□□□□□ -1.69
HMGB1P3-201ENST00000502802 IQGAP1P46940 1657 aa4.47□□□□□ -1.69
HMGB1P3-201ENST00000502802 MYOM3Q5VTT5 1437 aa4.46□□□□□ -1.69
HMGB1P3-201ENST00000502802 MIA2Q96PC5 1412 aa4.46□□□□□ -1.69
HMGB1P3-201ENST00000502802 ABCC3O15438 1527 aa4.46□□□□□ -1.69
HMGB1P3-201ENST00000502802 VWDEQ8N2E2 1590 aa4.46□□□□□ -1.7
HMGB1P3-201ENST00000502802 UGGT1Q9NYU2 1555 aa4.46□□□□□ -1.7
HMGB1P3-201ENST00000502802 LOC105371242A0A075B767 164 aa4.46□□□□□ -1.7
HMGB1P3-201ENST00000502802 A0A0A6YYD4 124 aa4.46□□□□□ -1.7
HMGB1P3-201ENST00000502802 H3BMH7 237 aa4.46□□□□□ -1.7
HMGB1P3-201ENST00000502802 XPO1O14980 1071 aaKnown RBP4.46□□□□□ -1.7
HMGB1P3-201ENST00000502802 DUSP11O75319 330 aaKnown RBP4.46□□□□□ -1.7
HMGB1P3-201ENST00000502802 ZNF432O94892 652 aa4.46□□□□□ -1.7
HMGB1P3-201ENST00000502802 ECDO95905 644 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P3-201ENST00000502802 CD1DP15813 335 aa4.46□□□□□ -1.7
HMGB1P3-201ENST00000502802 ZNF26P17031 533 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P3-201ENST00000502802 ATP6V1C1P21283 382 aa4.46□□□□□ -1.7
HMGB1P3-201ENST00000502802 RAG2P55895 527 aa4.46□□□□□ -1.7
HMGB1P3-201ENST00000502802 NOP14P78316 857 aaKnown RBP4.46□□□□□ -1.7
HMGB1P3-201ENST00000502802 HMGN5P82970 282 aaKnown RBP4.46□□□□□ -1.7
HMGB1P3-201ENST00000502802 UPP1Q16831 310 aa4.46□□□□□ -1.7
HMGB1P3-201ENST00000502802 ECSCRQ19T08 205 aa4.46□□□□□ -1.7
HMGB1P3-201ENST00000502802 CFAP157Q5JU67 520 aa4.46□□□□□ -1.7
HMGB1P3-201ENST00000502802 BSPRYQ5W0U4 402 aa4.46□□□□□ -1.7
HMGB1P3-201ENST00000502802 DMKNQ6E0U4 476 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P3-201ENST00000502802 C18orf65Q6ZTR6 163 aa4.46□□□□□ -1.7
HMGB1P3-201ENST00000502802 CENPUQ71F23 418 aa4.46□□□□□ -1.7
HMGB1P3-201ENST00000502802 VASH2Q86V25 355 aa4.46□□□□□ -1.7
HMGB1P3-201ENST00000502802 NR2C2APQ86WQ0 139 aa4.46□□□□□ -1.7
HMGB1P3-201ENST00000502802 CENPSQ8N2Z9 138 aa4.46□□□□□ -1.7
HMGB1P3-201ENST00000502802 NFAM1Q8NET5 270 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P3-201ENST00000502802 OR52M1Q8NGK5 317 aa4.46□□□□□ -1.7
HMGB1P3-201ENST00000502802 SPPL2AQ8TCT8 520 aa4.46□□□□□ -1.7
HMGB1P3-201ENST00000502802 C11orf52Q96A22 123 aa4.46□□□□□ -1.7
HMGB1P3-201ENST00000502802 FBXO17Q96EF6 278 aa4.46□□□□□ -1.7
HMGB1P3-201ENST00000502802 TNFRSF13CQ96RJ3 184 aa4.46□□□□□ -1.7
HMGB1P3-201ENST00000502802 TESK2Q96S53 571 aa4.46□□□□□ -1.7
HMGB1P3-201ENST00000502802 SYT15Q9BQS2 421 aa4.46□□□□□ -1.7
HMGB1P3-201ENST00000502802 TBCDQ9BTW9 1192 aa4.46□□□□□ -1.7
HMGB1P3-201ENST00000502802 APOOQ9BUR5 198 aa4.46□□□□□ -1.7
HMGB1P3-201ENST00000502802 CALHM2Q9HA72 323 aa4.46□□□□□ -1.7
HMGB1P3-201ENST00000502802 Q9HAA7 133 aa4.46□□□□□ -1.7
HMGB1P3-201ENST00000502802 AGPAT5Q9NUQ2 364 aa4.46□□□□□ -1.7
HMGB1P3-201ENST00000502802 GPR83Q9NYM4 423 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms