RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 THAP1Q9NVV9 213 aa11.77□□□□□ -0.53
HSPG2-213ENST00000498495 SH3BGRL2Q9UJC5 107 aa11.77□□□□□ -0.53
HSPG2-213ENST00000498495 CNOT11Q9UKZ1 510 aaKnown RBP11.77□□□□□ -0.53
HSPG2-213ENST00000498495 BOKQ9UMX3 212 aaPredicted RBP11.77□□□□□ -0.53
HSPG2-213ENST00000498495 C19orf53Q9UNZ5 99 aaPredicted RBP11.77□□□□□ -0.53
HSPG2-213ENST00000498495 A0A1B0GTH9 108 aa11.76□□□□□ -0.53
HSPG2-213ENST00000498495 UPK1AO00322 258 aa11.76□□□□□ -0.53
HSPG2-213ENST00000498495 CCL21O00585 134 aa11.76□□□□□ -0.53
HSPG2-213ENST00000498495 TO15178 435 aa11.76□□□□□ -0.53
HSPG2-213ENST00000498495 GLSO94925 669 aaPredicted RBP11.76□□□□□ -0.53
HSPG2-213ENST00000498495 SNX4O95219 450 aa11.76□□□□□ -0.53
HSPG2-213ENST00000498495 CT45A8P0DMV1 189 aa11.76□□□□□ -0.53
HSPG2-213ENST00000498495 CT45A9P0DMV2 189 aa11.76□□□□□ -0.53
HSPG2-213ENST00000498495 ESRRAP11474 423 aaPredicted RBP11.76□□□□□ -0.53
HSPG2-213ENST00000498495 PTGS2P35354 604 aa11.76□□□□□ -0.53
HSPG2-213ENST00000498495 KRT20P35900 424 aa11.76□□□□□ -0.53
HSPG2-213ENST00000498495 HPCAL1P37235 193 aa11.76□□□□□ -0.53
HSPG2-213ENST00000498495 CA7P43166 264 aa11.76□□□□□ -0.53
HSPG2-213ENST00000498495 FOXO1Q12778 655 aa11.76□□□□□ -0.53
HSPG2-213ENST00000498495 HSPB3Q12988 150 aa11.76□□□□□ -0.53
HSPG2-213ENST00000498495 PDE7AQ13946 482 aa11.76□□□□□ -0.53
HSPG2-213ENST00000498495 PTGR1Q14914 329 aa11.76□□□□□ -0.53
HSPG2-213ENST00000498495 HYAL4Q2M3T9 481 aa11.76□□□□□ -0.53
HSPG2-213ENST00000498495 SMU1Q2TAY7 513 aa11.76□□□□□ -0.53
HSPG2-213ENST00000498495 ZNF385BQ569K4 471 aa11.76□□□□□ -0.53
HSPG2-213ENST00000498495 CT45A2Q5DJT8 189 aa11.76□□□□□ -0.53
HSPG2-213ENST00000498495 CMPK2Q5EBM0 449 aa11.76□□□□□ -0.53
HSPG2-213ENST00000498495 CPTPQ5TA50 214 aa11.76□□□□□ -0.53
HSPG2-213ENST00000498495 PACS2Q86VP3 889 aa11.76□□□□□ -0.53
HSPG2-213ENST00000498495 ZGRF1Q86YA3 2104 aa11.76□□□□□ -0.53
HSPG2-213ENST00000498495 SLC44A2Q8IWA5 706 aaPredicted RBP11.76□□□□□ -0.53
HSPG2-213ENST00000498495 SLC34A3Q8N130 599 aa11.76□□□□□ -0.53
HSPG2-213ENST00000498495 FAM109AQ8N4B1 249 aa11.76□□□□□ -0.53
HSPG2-213ENST00000498495 TMEM251Q8N6I4 163 aa11.76□□□□□ -0.53
HSPG2-213ENST00000498495 TMBIM1Q969X1 311 aa11.76□□□□□ -0.53
HSPG2-213ENST00000498495 TMCO6Q96DC7 493 aa11.76□□□□□ -0.53
HSPG2-213ENST00000498495 VSTM2LQ96N03 204 aa11.76□□□□□ -0.53
HSPG2-213ENST00000498495 NUF2Q9BZD4 464 aa11.76□□□□□ -0.53
HSPG2-213ENST00000498495 AKTIPQ9H8T0 292 aa11.76□□□□□ -0.53
HSPG2-213ENST00000498495 PROK2Q9HC23 129 aa11.76□□□□□ -0.53
HSPG2-213ENST00000498495 ZFP64Q9NPA5 681 aa11.76□□□□□ -0.53
HSPG2-213ENST00000498495 ACSS1Q9NUB1 689 aaPredicted RBP11.76□□□□□ -0.53
HSPG2-213ENST00000498495 ATP6V1HQ9UI12 483 aa11.76□□□□□ -0.53
HSPG2-213ENST00000498495 HAO1Q9UJM8 370 aa11.76□□□□□ -0.53
HSPG2-213ENST00000498495 ZNF835Q9Y2P0 537 aa11.76□□□□□ -0.53
HSPG2-213ENST00000498495 OR10H1Q9Y4A9 318 aa11.76□□□□□ -0.53
HSPG2-213ENST00000498495 WIPF3A6NGB9 483 aa11.75□□□□□ -0.53
HSPG2-213ENST00000498495 PRRG2O14669 202 aa11.75□□□□□ -0.53
HSPG2-213ENST00000498495 SCAMP2O15127 329 aaKnown RBP11.75□□□□□ -0.53
HSPG2-213ENST00000498495 ZNHIT1O43257 154 aa11.75□□□□□ -0.53
HSPG2-213ENST00000498495 LDLRP01130 860 aa11.75□□□□□ -0.53
HSPG2-213ENST00000498495 G6PDP11413 515 aa11.75□□□□□ -0.53
HSPG2-213ENST00000498495 PRPS1L1P21108 318 aa11.75□□□□□ -0.53
HSPG2-213ENST00000498495 CASP3P42574 277 aa11.75□□□□□ -0.53
HSPG2-213ENST00000498495 MAGEA5P43359 124 aa11.75□□□□□ -0.53
HSPG2-213ENST00000498495 MASP1P48740 699 aa11.75□□□□□ -0.53
HSPG2-213ENST00000498495 PRKAG1P54619 331 aa11.75□□□□□ -0.53
HSPG2-213ENST00000498495 CORO7P57737 925 aa11.75□□□□□ -0.53
HSPG2-213ENST00000498495 PSPHP78330 225 aa11.75□□□□□ -0.53
HSPG2-213ENST00000498495 ZNF155Q12901 538 aaPredicted RBP11.75□□□□□ -0.53
HSPG2-213ENST00000498495 ZNHIT3Q15649 155 aaPredicted RBP11.75□□□□□ -0.53
HSPG2-213ENST00000498495 C3AR1Q16581 482 aa11.75□□□□□ -0.53
HSPG2-213ENST00000498495 ARHGAP11AQ6P4F7 1023 aa11.75□□□□□ -0.53
HSPG2-213ENST00000498495 Q6ZPB1 254 aaPredicted RBP11.75□□□□□ -0.53
HSPG2-213ENST00000498495 OR2L13Q8N349 312 aa11.75□□□□□ -0.53
HSPG2-213ENST00000498495 NATD1Q8N6N6 113 aa11.75□□□□□ -0.53
HSPG2-213ENST00000498495 OR7A2PQ8NGA2 310 aa11.75□□□□□ -0.53
HSPG2-213ENST00000498495 CEP70Q8NHQ1 597 aa11.75□□□□□ -0.53
HSPG2-213ENST00000498495 RAB3IL1Q8TBN0 382 aa11.75□□□□□ -0.53
HSPG2-213ENST00000498495 ATP6V1G3Q96LB4 118 aa11.75□□□□□ -0.53
HSPG2-213ENST00000498495 PSMG3-AS1Q96PY0 264 aa11.75□□□□□ -0.53
HSPG2-213ENST00000498495 BTBD9Q96Q07 612 aa11.75□□□□□ -0.53
HSPG2-213ENST00000498495 ANGPTL4Q9BY76 406 aa11.75□□□□□ -0.53
HSPG2-213ENST00000498495 LDAHQ9H6V9 325 aa11.75□□□□□ -0.53
HSPG2-213ENST00000498495 METTL7AQ9H8H3 244 aa11.75□□□□□ -0.53
HSPG2-213ENST00000498495 ZDHHC11Q9H8X9 412 aa11.75□□□□□ -0.53
HSPG2-213ENST00000498495 C3orf14Q9HBI5 128 aa11.75□□□□□ -0.53
HSPG2-213ENST00000498495 ATAD3AQ9NVI7 634 aa11.75□□□□□ -0.53
HSPG2-213ENST00000498495 NOP53Q9NZM5 478 aaKnown RBP11.75□□□□□ -0.53
HSPG2-213ENST00000498495 SUCOQ9UBS9 1254 aaKnown RBP11.75□□□□□ -0.53
HSPG2-213ENST00000498495 B4GALT7Q9UBV7 327 aa11.75□□□□□ -0.53
HSPG2-213ENST00000498495 MAPRE3Q9UPY8 281 aa11.75□□□□□ -0.53
HSPG2-213ENST00000498495 EML6Q6ZMW3 1958 aa11.75□□□□□ -0.53
HSPG2-213ENST00000498495 SVILO95425 2214 aa11.75□□□□□ -0.53
HSPG2-213ENST00000498495 A0A1W2PRB8 838 aa11.74□□□□□ -0.53
HSPG2-213ENST00000498495 OR6C70A6NIJ9 312 aa11.74□□□□□ -0.53
HSPG2-213ENST00000498495 ABCB7O75027 752 aa11.74□□□□□ -0.53
HSPG2-213ENST00000498495 UGT2B11O75310 529 aa11.74□□□□□ -0.53
HSPG2-213ENST00000498495 SNNO75324 88 aaPredicted RBP11.74□□□□□ -0.53
HSPG2-213ENST00000498495 IFI6P09912 130 aa11.74□□□□□ -0.53
HSPG2-213ENST00000498495 RFPL3SP0C7P2 107 aa11.74□□□□□ -0.53
HSPG2-213ENST00000498495 KITP10721 976 aa11.74□□□□□ -0.53
HSPG2-213ENST00000498495 LAMP1P11279 417 aa11.74□□□□□ -0.53
HSPG2-213ENST00000498495 H2AFXP16104 143 aaPredicted RBP11.74□□□□□ -0.53
HSPG2-213ENST00000498495 LBPP18428 481 aa11.74□□□□□ -0.53
HSPG2-213ENST00000498495 IL12BP29460 328 aa11.74□□□□□ -0.53
HSPG2-213ENST00000498495 FRKP42685 505 aaPredicted RBP11.74□□□□□ -0.53
HSPG2-213ENST00000498495 PNLIPRP2P54317 469 aa11.74□□□□□ -0.53
HSPG2-213ENST00000498495 CLDN8P56748 225 aa11.74□□□□□ -0.53
HSPG2-213ENST00000498495 PSG6Q00889 435 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms