RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 WDR36Q8NI36 951 aaKnown RBP3.69□□□□□ -1.82
VPS36-206ENST00000497149 OR4F4Q96R69 305 aa3.69□□□□□ -1.82
VPS36-206ENST00000497149 TSPAN18Q96SJ8 248 aa3.69□□□□□ -1.82
VPS36-206ENST00000497149 APOL2Q9BQE5 337 aa3.69□□□□□ -1.82
VPS36-206ENST00000497149 NMNAT2Q9BZQ4 307 aa3.69□□□□□ -1.82
VPS36-206ENST00000497149 TRIM9Q9C026 710 aa3.69□□□□□ -1.82
VPS36-206ENST00000497149 C1orf21Q9H246 121 aa3.69□□□□□ -1.82
VPS36-206ENST00000497149 TMEM231Q9H6L2 316 aa3.69□□□□□ -1.82
VPS36-206ENST00000497149 CENPMQ9NSP4 180 aa3.69□□□□□ -1.82
VPS36-206ENST00000497149 CUTCQ9NTM9 273 aa3.69□□□□□ -1.82
VPS36-206ENST00000497149 RAI14Q9P0K7 980 aa3.69□□□□□ -1.82
VPS36-206ENST00000497149 MBD2Q9UBB5 411 aa3.69□□□□□ -1.82
VPS36-206ENST00000497149 ODF2LQ9ULJ1 636 aa3.69□□□□□ -1.82
VPS36-206ENST00000497149 FKBP7Q9Y680 259 aa3.69□□□□□ -1.82
VPS36-206ENST00000497149 TRABD2BA6NFA1 517 aa3.68□□□□□ -1.82
VPS36-206ENST00000497149 RASGRF2O14827 1237 aa3.68□□□□□ -1.82
VPS36-206ENST00000497149 PRPSAP2O60256 369 aa3.68□□□□□ -1.82
VPS36-206ENST00000497149 TOXO94900 526 aa3.68□□□□□ -1.82
VPS36-206ENST00000497149 IGSF6O95976 241 aa3.68□□□□□ -1.82
VPS36-206ENST00000497149 RALAP11233 206 aa3.68□□□□□ -1.82
VPS36-206ENST00000497149 CCNA2P20248 432 aa3.68□□□□□ -1.82
VPS36-206ENST00000497149 MAPK3P27361 379 aaPredicted RBP3.68□□□□□ -1.82
VPS36-206ENST00000497149 RPA1P27694 616 aa3.68□□□□□ -1.82
VPS36-206ENST00000497149 PRDX2P32119 198 aa3.68□□□□□ -1.82
VPS36-206ENST00000497149 HERVK_113P63132 956 aa3.68□□□□□ -1.82
VPS36-206ENST00000497149 ERVK-8P63133 956 aa3.68□□□□□ -1.82
VPS36-206ENST00000497149 NOP14P78316 857 aaKnown RBP3.68□□□□□ -1.82
VPS36-206ENST00000497149 GABPB1Q06547 395 aaPredicted RBP3.68□□□□□ -1.82
VPS36-206ENST00000497149 MS4A13Q5J8X5 152 aa3.68□□□□□ -1.82
VPS36-206ENST00000497149 RNLSQ5VYX0 342 aa3.68□□□□□ -1.82
VPS36-206ENST00000497149 SPINK14Q6IE38 97 aa3.68□□□□□ -1.82
VPS36-206ENST00000497149 PRR5LQ6MZQ0 368 aa3.68□□□□□ -1.82
VPS36-206ENST00000497149 RBM43Q6ZSC3 357 aaKnown RBP3.68□□□□□ -1.82
VPS36-206ENST00000497149 HPS6Q86YV9 775 aa3.68□□□□□ -1.82
VPS36-206ENST00000497149 CNNM3Q8NE01 707 aa3.68□□□□□ -1.82
VPS36-206ENST00000497149 FAM71CQ8NEG0 241 aa3.68□□□□□ -1.82
VPS36-206ENST00000497149 OR56B1Q8NGI3 324 aa3.68□□□□□ -1.82
VPS36-206ENST00000497149 TYMSOSQ8TAI1 123 aa3.68□□□□□ -1.82
VPS36-206ENST00000497149 ZNF671Q8TAW3 534 aa3.68□□□□□ -1.82
VPS36-206ENST00000497149 NCLNQ969V3 563 aa3.68□□□□□ -1.82
VPS36-206ENST00000497149 MRPL38Q96DV4 380 aaKnown RBP3.68□□□□□ -1.82
VPS36-206ENST00000497149 C14orf79Q96F83 325 aa3.68□□□□□ -1.82
VPS36-206ENST00000497149 ZBED6CLQ96FA7 236 aaPredicted RBP3.68□□□□□ -1.82
VPS36-206ENST00000497149 PIWIL1Q96J94 861 aaKnown RBP3.68□□□□□ -1.82
VPS36-206ENST00000497149 MCCC1Q96RQ3 725 aaPredicted RBP3.68□□□□□ -1.82
VPS36-206ENST00000497149 ERVK-6Q9BXR3 956 aa3.68□□□□□ -1.82
VPS36-206ENST00000497149 GPR83Q9NYM4 423 aa3.68□□□□□ -1.82
VPS36-206ENST00000497149 HOOK1Q9UJC3 728 aaKnown RBP3.68□□□□□ -1.82
VPS36-206ENST00000497149 ZNF490Q9ULM2 529 aaPredicted RBP3.68□□□□□ -1.82
VPS36-206ENST00000497149 FZR1Q9UM11 496 aa3.68□□□□□ -1.82
VPS36-206ENST00000497149 POGZQ7Z3K3 1410 aa3.68□□□□□ -1.82
VPS36-206ENST00000497149 GON4LQ3T8J9 2241 aa3.67□□□□□ -1.82
VPS36-206ENST00000497149 LRIT2A6NDA9 550 aa3.67□□□□□ -1.82
VPS36-206ENST00000497149 MFSD2BA6NFX1 497 aa3.67□□□□□ -1.82
VPS36-206ENST00000497149 NPIPA2E9PIF3 369 aa3.67□□□□□ -1.82
VPS36-206ENST00000497149 H3BMH7 237 aa3.67□□□□□ -1.82
VPS36-206ENST00000497149 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.67□□□□□ -1.82
VPS36-206ENST00000497149 SAP18O00422 153 aaKnown RBP3.67□□□□□ -1.82
VPS36-206ENST00000497149 SRSF10O75494 262 aaKnown RBP3.67□□□□□ -1.82
VPS36-206ENST00000497149 WNT2P09544 360 aa3.67□□□□□ -1.82
VPS36-206ENST00000497149 PTPN6P29350 595 aa3.67□□□□□ -1.82
VPS36-206ENST00000497149 ASMTP46597 345 aa3.67□□□□□ -1.82
VPS36-206ENST00000497149 ZNF33BQ06732 778 aa3.67□□□□□ -1.82
VPS36-206ENST00000497149 KARSQ15046 597 aaKnown RBP3.67□□□□□ -1.82
VPS36-206ENST00000497149 ZNF239Q16600 458 aaKnown RBP3.67□□□□□ -1.82
VPS36-206ENST00000497149 PPP1R3AQ16821 1122 aa3.67□□□□□ -1.82
VPS36-206ENST00000497149 SLC22A6Q4U2R8 563 aa3.67□□□□□ -1.82
VPS36-206ENST00000497149 PAQR9Q6ZVX9 377 aa3.67□□□□□ -1.82
VPS36-206ENST00000497149 PRSS48Q7RTY5 328 aa3.67□□□□□ -1.82
VPS36-206ENST00000497149 CENPSQ8N2Z9 138 aa3.67□□□□□ -1.82
VPS36-206ENST00000497149 MINDY2Q8NBR6 621 aa3.67□□□□□ -1.82
VPS36-206ENST00000497149 RAB17Q9H0T7 212 aa3.67□□□□□ -1.82
VPS36-206ENST00000497149 FAM114A2Q9NRY5 505 aa3.67□□□□□ -1.82
VPS36-206ENST00000497149 SOHLH2Q9NX45 425 aa3.67□□□□□ -1.82
VPS36-206ENST00000497149 SENP1Q9P0U3 644 aa3.67□□□□□ -1.82
VPS36-206ENST00000497149 DHRS7Q9Y394 339 aa3.67□□□□□ -1.82
VPS36-206ENST00000497149 RNF115Q9Y4L5 304 aa3.67□□□□□ -1.82
VPS36-206ENST00000497149 HCFC1P51610 2035 aa3.66□□□□□ -1.82
VPS36-206ENST00000497149 E9PMD0 336 aa3.66□□□□□ -1.82
VPS36-206ENST00000497149 C11orf98E9PRG8 122 aa3.66□□□□□ -1.82
VPS36-206ENST00000497149 SGK494L7N484 410 aa3.66□□□□□ -1.82
VPS36-206ENST00000497149 IMPA2O14732 288 aa3.66□□□□□ -1.82
VPS36-206ENST00000497149 SDC3O75056 442 aa3.66□□□□□ -1.82
VPS36-206ENST00000497149 PRAMEF12O95522 483 aa3.66□□□□□ -1.82
VPS36-206ENST00000497149 SLC35G4P0C7Q5 338 aa3.66□□□□□ -1.82
VPS36-206ENST00000497149 PVRP15151 417 aa3.66□□□□□ -1.82
VPS36-206ENST00000497149 RFC2P35250 354 aa3.66□□□□□ -1.82
VPS36-206ENST00000497149 IST1P53990 364 aa3.66□□□□□ -1.82
VPS36-206ENST00000497149 SRYQ05066 204 aa3.66□□□□□ -1.82
VPS36-206ENST00000497149 SPP2Q13103 211 aa3.66□□□□□ -1.82
VPS36-206ENST00000497149 Q1RN00 199 aa3.66□□□□□ -1.82
VPS36-206ENST00000497149 MICAQ29983 383 aa3.66□□□□□ -1.82
VPS36-206ENST00000497149 TSEN54Q7Z6J9 526 aaKnown RBP3.66□□□□□ -1.82
VPS36-206ENST00000497149 SERINC5Q86VE9 423 aa3.66□□□□□ -1.82
VPS36-206ENST00000497149 VPS36Q86VN1 386 aa3.66□□□□□ -1.82
VPS36-206ENST00000497149 ARFGAP2Q8N6H7 521 aa3.66□□□□□ -1.82
VPS36-206ENST00000497149 GPATCH11Q8N954 259 aa3.66□□□□□ -1.82
VPS36-206ENST00000497149 RHOXF1Q8NHV9 184 aa3.66□□□□□ -1.82
VPS36-206ENST00000497149 FCGR1BQ92637 280 aa3.66□□□□□ -1.82
VPS36-206ENST00000497149 DNAJA3Q96EY1 480 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms