RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 Q9H521 79 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 ANKRD19PQ9H560 264 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 ZNF768Q9H5H4 540 aaKnown RBP2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 TMEM138Q9NPI0 162 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 EQTNQ9NQ60 294 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 SMOXQ9NWM0 555 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 MIOSQ9NXC5 875 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 DPP3Q9NY33 737 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 MARCH4Q9P2E8 410 aaPredicted RBP2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 AJAP1Q9UKB5 411 aaPredicted RBP2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 ELF5Q9UKW6 265 aaPredicted RBP2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 TBC1D24Q9ULP9 559 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 MRPS18CQ9Y3D5 142 aaKnown RBP2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 TCAF1Q9Y4C2 921 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 HSPE1-MOB4S4R3N1 261 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 NRXN1Q9ULB1 1477 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 WNK3Q9BYP7 1800 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 MAST3O60307 1309 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 ADGRA2Q96PE1 1338 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 AK9Q5TCS8 1911 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 ZMYM4Q5VZL5 1548 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 MYH11P35749 1972 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 A0A1B0GV72 72 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 A0A1W2PQL4 384 aaPredicted RBP2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 ELOVL7A1L3X0 281 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 LEFTY2O00292 366 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 SULT1C2O00338 296 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 EEF2KO00418 725 aaKnown RBP2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 TNFSF14O43557 240 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 SSX4O60224 188 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 BANF1O75531 89 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 RFPL2O75678 378 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 CYP7B1O75881 506 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 TNFAIP8O95379 198 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 CYB5R3P00387 301 aaPredicted RBP2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 RPLP2P05387 115 aaKnown RBP2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 UGT2B4P06133 528 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 RD3LP0DJH9 198 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 MTHFD2P13995 350 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 UQCRBP14927 111 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 FOSL2P15408 326 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 OTX1P32242 354 aaPredicted RBP2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 RPS19P39019 145 aaKnown RBP2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 ARRB1P49407 418 aaPredicted RBP2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 IDH3GP51553 393 aaPredicted RBP2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 RAB11AP62491 216 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 MRPS22P82650 360 aaKnown RBP2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 PTH1RQ03431 593 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 CHRNB3Q05901 458 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 GABPAQ06546 454 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 BST1Q10588 318 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 BNIP2Q12982 314 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 PDIA2Q13087 525 aaKnown RBP2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 PDZK1IP1Q13113 114 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 ILKQ13418 452 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 TUBB3Q13509 450 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 KCNJ11Q14654 390 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 TRIP10Q15642 601 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 ELAVL1Q15717 326 aaKnown RBP2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 RAB11BQ15907 218 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 ALKBH6Q3KRA9 238 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 COLEC12Q5KU26 742 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 C9orf64Q5T6V5 341 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 C1QL3Q5VWW1 255 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 ADNP2Q6IQ32 1131 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 ZNF544Q6NX49 715 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 VSTM1Q6UX27 236 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 IZUMO2Q6UXV1 221 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 Q6ZSN1 163 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 CREB3L2Q70SY1 520 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 CYS1Q717R9 158 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 C1orf210Q8IVY1 113 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 ARHGAP12Q8IWW6 846 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 ARRDC1Q8N5I2 433 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 PI4KAP1Q8N8J0 262 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 FAM47BQ8NA70 645 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 COLGALT1Q8NBJ5 622 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 OR9K2Q8NGE7 335 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 OR5B17Q8NGF7 314 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 TRMT10AQ8TBZ6 339 aaKnown RBP2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 FAM222BQ8WU58 562 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 NSMAFQ92636 917 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 BCL2L2Q92843 193 aaPredicted RBP2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 CMTM5Q96DZ9 223 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 SLC45A3Q96JT2 553 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 MRGPRX1Q96LB2 322 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 HOPXQ9BPY8 73 aaPredicted RBP2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 MED10Q9BTT4 135 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 C1orf50Q9BV19 199 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 ANKRD60Q9BZ19 345 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 TM6SF2Q9BZW4 377 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 ILKAPQ9H0C8 392 aaPredicted RBP2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 SHARPINQ9H0F6 387 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 PCDHAC1Q9H158 963 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 P2RY12Q9H244 342 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 KIR3DX1Q9H7L2 352 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 ZNF696Q9H7X3 374 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 GPN2Q9H9Y4 310 aaPredicted RBP2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 FN3KRPQ9HA64 309 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 WDR41Q9HAD4 459 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms