RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 NLRP11P59045 1033 aaKnown RBP2.61□□□□□ -1.99
CD46-218ENST00000496723 KRT83P78385 493 aa2.61□□□□□ -1.99
CD46-218ENST00000496723 CCZ1BP86790 482 aa2.61□□□□□ -1.99
CD46-218ENST00000496723 CCZ1P86791 482 aaPredicted RBP2.61□□□□□ -1.99
CD46-218ENST00000496723 C17orf67Q0P5P2 114 aa2.61□□□□□ -1.99
CD46-218ENST00000496723 BNIP1Q12981 228 aa2.61□□□□□ -1.99
CD46-218ENST00000496723 CAPRIN1Q14444 709 aaKnown RBP2.61□□□□□ -1.99
CD46-218ENST00000496723 SMC1AQ14683 1233 aaKnown RBP2.61□□□□□ -1.99
CD46-218ENST00000496723 ZNF658Q5TYW1 1059 aaPredicted RBP2.61□□□□□ -1.99
CD46-218ENST00000496723 PRAMEF7Q5VXH5 474 aa2.61□□□□□ -1.99
CD46-218ENST00000496723 Q6ZVH6 145 aa2.61□□□□□ -1.99
CD46-218ENST00000496723 TOM1L2Q6ZVM7 507 aa2.61□□□□□ -1.99
CD46-218ENST00000496723 BNIPLQ7Z465 357 aa2.61□□□□□ -1.99
CD46-218ENST00000496723 TSEN54Q7Z6J9 526 aaKnown RBP2.61□□□□□ -1.99
CD46-218ENST00000496723 ZNF410Q86VK4 478 aa2.61□□□□□ -1.99
CD46-218ENST00000496723 ZNF677Q86XU0 584 aa2.61□□□□□ -1.99
CD46-218ENST00000496723 SFRP1Q8N474 314 aa2.61□□□□□ -1.99
CD46-218ENST00000496723 OR4F17Q8NGA8 305 aa2.61□□□□□ -1.99
CD46-218ENST00000496723 LINC01006Q8NI28 216 aa2.61□□□□□ -1.99
CD46-218ENST00000496723 PSMA8Q8TAA3 256 aa2.61□□□□□ -1.99
CD46-218ENST00000496723 FNDC8Q8TC99 324 aa2.61□□□□□ -1.99
CD46-218ENST00000496723 U2AF1L4Q8WU68 220 aaKnown RBP2.61□□□□□ -1.99
CD46-218ENST00000496723 TMEM37Q8WXS4 190 aa2.61□□□□□ -1.99
CD46-218ENST00000496723 VMP1Q96GC9 406 aa2.61□□□□□ -1.99
CD46-218ENST00000496723 OR4F4Q96R69 305 aa2.61□□□□□ -1.99
CD46-218ENST00000496723 NLNQ9BYT8 704 aa2.61□□□□□ -1.99
CD46-218ENST00000496723 ELOVL4Q9GZR5 314 aa2.61□□□□□ -1.99
CD46-218ENST00000496723 TMEM245Q9H330 911 aa2.61□□□□□ -1.99
CD46-218ENST00000496723 ARGLU1Q9NWB6 273 aaPredicted RBP2.61□□□□□ -1.99
CD46-218ENST00000496723 NDUFA13Q9P0J0 144 aa2.61□□□□□ -1.99
CD46-218ENST00000496723 DPM3Q9P2X0 92 aa2.61□□□□□ -1.99
CD46-218ENST00000496723 COPS7AQ9UBW8 275 aa2.61□□□□□ -1.99
CD46-218ENST00000496723 ZNF175Q9Y473 711 aa2.61□□□□□ -1.99
CD46-218ENST00000496723 COL4A4P53420 1690 aaPredicted RBP2.6□□□□□ -1.99
CD46-218ENST00000496723 A0A0U1RQG5 324 aaPredicted RBP2.6□□□□□ -1.99
CD46-218ENST00000496723 SLC17A2O00624 439 aa2.6□□□□□ -1.99
CD46-218ENST00000496723 KRTAP5-8O75690 187 aa2.6□□□□□ -1.99
CD46-218ENST00000496723 APBB3O95704 486 aa2.6□□□□□ -1.99
CD46-218ENST00000496723 HOXB7P09629 217 aa2.6□□□□□ -1.99
CD46-218ENST00000496723 MGMTP16455 207 aa2.6□□□□□ -1.99
CD46-218ENST00000496723 ELK1P19419 428 aa2.6□□□□□ -1.99
CD46-218ENST00000496723 ALDH3B2P48448 385 aa2.6□□□□□ -1.99
CD46-218ENST00000496723 POU3F4P49335 361 aa2.6□□□□□ -1.99
CD46-218ENST00000496723 CNN1P51911 297 aaKnown RBP2.6□□□□□ -1.99
CD46-218ENST00000496723 METAP1P53582 386 aa2.6□□□□□ -1.99
CD46-218ENST00000496723 CMPK2Q5EBM0 449 aa2.6□□□□□ -1.99
CD46-218ENST00000496723 PRR5LQ6MZQ0 368 aa2.6□□□□□ -1.99
CD46-218ENST00000496723 CHCHD4Q8N4Q1 142 aa2.6□□□□□ -1.99
CD46-218ENST00000496723 MLKLQ8NB16 471 aa2.6□□□□□ -1.99
CD46-218ENST00000496723 DEFB118Q96PH6 123 aa2.6□□□□□ -1.99
CD46-218ENST00000496723 KIR2DL4Q99706 377 aa2.6□□□□□ -1.99
CD46-218ENST00000496723 HCAR1Q9BXC0 346 aa2.6□□□□□ -1.99
CD46-218ENST00000496723 ALG9Q9H6U8 611 aa2.6□□□□□ -1.99
CD46-218ENST00000496723 KCNMB3Q9NPA1 279 aa2.6□□□□□ -1.99
CD46-218ENST00000496723 HPS4Q9NQG7 708 aa2.6□□□□□ -1.99
CD46-218ENST00000496723 SLC2A6Q9UGQ3 507 aa2.6□□□□□ -1.99
CD46-218ENST00000496723 CCPG1Q9ULG6 757 aa2.6□□□□□ -1.99
CD46-218ENST00000496723 RPH3AQ9Y2J0 694 aaPredicted RBP2.6□□□□□ -1.99
CD46-218ENST00000496723 MTF2Q9Y483 593 aaPredicted RBP2.6□□□□□ -1.99
CD46-218ENST00000496723 NPC1L1Q9UHC9 1359 aa2.6□□□□□ -1.99
CD46-218ENST00000496723 IGLV8-61A0A075B6I0 122 aa2.59□□□□□ -1.99
CD46-218ENST00000496723 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.59□□□□□ -1.99
CD46-218ENST00000496723 PDLIM1O00151 329 aa2.59□□□□□ -1.99
CD46-218ENST00000496723 TLR4O00206 839 aa2.59□□□□□ -1.99
CD46-218ENST00000496723 NME2P1O60361 137 aa2.59□□□□□ -1.99
CD46-218ENST00000496723 GOSR1O95249 250 aa2.59□□□□□ -1.99
CD46-218ENST00000496723 SYNGR4O95473 234 aa2.59□□□□□ -1.99
CD46-218ENST00000496723 HMOX1P09601 288 aa2.59□□□□□ -1.99
CD46-218ENST00000496723 MARCKSP29966 332 aaPredicted RBP2.59□□□□□ -1.99
CD46-218ENST00000496723 ZKSCAN8Q15776 578 aaPredicted RBP2.59□□□□□ -1.99
CD46-218ENST00000496723 DPY19L2P2Q6ZN68 376 aa2.59□□□□□ -1.99
CD46-218ENST00000496723 RANBP3LQ86VV4 465 aaPredicted RBP2.59□□□□□ -1.99
CD46-218ENST00000496723 GPR65Q8IYL9 337 aa2.59□□□□□ -1.99
CD46-218ENST00000496723 CEND1Q8N111 149 aa2.59□□□□□ -1.99
CD46-218ENST00000496723 COLGALT1Q8NBJ5 622 aa2.59□□□□□ -1.99
CD46-218ENST00000496723 OR2L5Q8NG80 312 aa2.59□□□□□ -1.99
CD46-218ENST00000496723 TMEM45BQ96B21 275 aa2.59□□□□□ -1.99
CD46-218ENST00000496723 FAM122AQ96E09 287 aa2.59□□□□□ -1.99
CD46-218ENST00000496723 DNAJA3Q96EY1 480 aa2.59□□□□□ -1.99
CD46-218ENST00000496723 OPN3Q9H1Y3 402 aaPredicted RBP2.59□□□□□ -1.99
CD46-218ENST00000496723 COMMD8Q9NX08 183 aa2.59□□□□□ -1.99
CD46-218ENST00000496723 TMEM9Q9P0T7 183 aa2.59□□□□□ -1.99
CD46-218ENST00000496723 LHX3Q9UBR4 397 aa2.59□□□□□ -1.99
CD46-218ENST00000496723 MIOXQ9UGB7 285 aa2.59□□□□□ -1.99
CD46-218ENST00000496723 APOBEC3BQ9UH17 382 aaKnown RBP2.59□□□□□ -1.99
CD46-218ENST00000496723 NOL7Q9UMY1 257 aaKnown RBP2.59□□□□□ -1.99
CD46-218ENST00000496723 TNRQ92752 1358 aa2.59□□□□□ -2
CD46-218ENST00000496723 MACROD2A1Z1Q3 448 aa2.58□□□□□ -2
CD46-218ENST00000496723 SDC3O75056 442 aa2.58□□□□□ -2
CD46-218ENST00000496723 LRP3O75074 770 aa2.58□□□□□ -2
CD46-218ENST00000496723 CXCL14O95715 111 aa2.58□□□□□ -2
CD46-218ENST00000496723 IGSF6O95976 241 aa2.58□□□□□ -2
CD46-218ENST00000496723 H2AFZP0C0S5 128 aa2.58□□□□□ -2
CD46-218ENST00000496723 TRPC1P48995 793 aa2.58□□□□□ -2
CD46-218ENST00000496723 NT5C2P49902 561 aa2.58□□□□□ -2
CD46-218ENST00000496723 CCL11P51671 97 aa2.58□□□□□ -2
CD46-218ENST00000496723 SGSHP51688 502 aa2.58□□□□□ -2
CD46-218ENST00000496723 NOP14P78316 857 aaKnown RBP2.58□□□□□ -2
CD46-218ENST00000496723 PPP1R8Q12972 351 aaKnown RBP2.58□□□□□ -2
CD46-218ENST00000496723 TSTA3Q13630 321 aaPredicted RBP2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms