RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, humanhuman

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-223ENST00000496024 ZNF764Q96H86 408 aaPredicted RBP9.05□□□□□ -0.96
CALD1-223ENST00000496024 SGCZQ96LD1 299 aa9.05□□□□□ -0.96
CALD1-223ENST00000496024 VSTM2LQ96N03 204 aa9.05□□□□□ -0.96
CALD1-223ENST00000496024 FRMD6Q96NE9 622 aa9.05□□□□□ -0.96
CALD1-223ENST00000496024 BARD1Q99728 777 aaKnown RBP9.05□□□□□ -0.96
CALD1-223ENST00000496024 DUSP26Q9BV47 211 aa9.05□□□□□ -0.96
CALD1-223ENST00000496024 SACM1LQ9NTJ5 587 aa9.05□□□□□ -0.96
CALD1-223ENST00000496024 ATAD3AQ9NVI7 634 aa9.05□□□□□ -0.96
CALD1-223ENST00000496024 ASIC5Q9NY37 505 aa9.05□□□□□ -0.96
CALD1-223ENST00000496024 TAS2R9Q9NYW1 312 aa9.05□□□□□ -0.96
CALD1-223ENST00000496024 NPIPA1Q9UND3 350 aa9.05□□□□□ -0.96
CALD1-223ENST00000496024 C19orf53Q9UNZ5 99 aaPredicted RBP9.05□□□□□ -0.96
CALD1-223ENST00000496024 OR10H1Q9Y4A9 318 aa9.05□□□□□ -0.96
CALD1-223ENST00000496024 SNX8Q9Y5X2 465 aa9.05□□□□□ -0.96
CALD1-223ENST00000496024 USH1CQ9Y6N9 552 aa9.05□□□□□ -0.96
CALD1-223ENST00000496024 MYO7BQ6PIF6 2116 aa9.05□□□□□ -0.96
CALD1-223ENST00000496024 RELNP78509 3460 aa9.04□□□□□ -0.96
CALD1-223ENST00000496024 A0A087WV62 115 aa9.04□□□□□ -0.96
CALD1-223ENST00000496024 ASPDHA6ND91 283 aa9.04□□□□□ -0.96
CALD1-223ENST00000496024 C9JVG2 144 aa9.04□□□□□ -0.96
CALD1-223ENST00000496024 PLOD2O00469 737 aa9.04□□□□□ -0.96
CALD1-223ENST00000496024 ZNF195O14628 629 aa9.04□□□□□ -0.96
CALD1-223ENST00000496024 TP53I11O14683 189 aa9.04□□□□□ -0.96
CALD1-223ENST00000496024 TFECO14948 347 aaPredicted RBP9.04□□□□□ -0.96
CALD1-223ENST00000496024 ZNHIT1O43257 154 aa9.04□□□□□ -0.96
CALD1-223ENST00000496024 UNC5CO95185 931 aa9.04□□□□□ -0.96
CALD1-223ENST00000496024 ZIC2O95409 532 aaPredicted RBP9.04□□□□□ -0.96
CALD1-223ENST00000496024 C6orf47O95873 294 aa9.04□□□□□ -0.96
CALD1-223ENST00000496024 EDN3P14138 238 aa9.04□□□□□ -0.96
CALD1-223ENST00000496024 CNR1P21554 472 aa9.04□□□□□ -0.96
CALD1-223ENST00000496024 DRD5P21918 477 aa9.04□□□□□ -0.96
CALD1-223ENST00000496024 RFX3P48380 749 aa9.04□□□□□ -0.96
CALD1-223ENST00000496024 TMED10P49755 219 aaKnown RBP9.04□□□□□ -0.96
CALD1-223ENST00000496024 KCNK10P57789 538 aa9.04□□□□□ -0.96
CALD1-223ENST00000496024 UFM1P61960 85 aa9.04□□□□□ -0.96
CALD1-223ENST00000496024 DCAF7P61962 342 aa9.04□□□□□ -0.96
CALD1-223ENST00000496024 KCNJ2P63252 427 aa9.04□□□□□ -0.96
CALD1-223ENST00000496024 RPS6KA2Q15349 733 aa9.04□□□□□ -0.96
CALD1-223ENST00000496024 NTRK2Q16620 822 aa9.04□□□□□ -0.96
CALD1-223ENST00000496024 TMEM198Q66K66 360 aa9.04□□□□□ -0.96
CALD1-223ENST00000496024 ZNF324BQ6AW86 544 aaPredicted RBP9.04□□□□□ -0.96
CALD1-223ENST00000496024 OR4F3Q6IEY1 312 aa9.04□□□□□ -0.96
CALD1-223ENST00000496024 NPSR1Q6W5P4 371 aa9.04□□□□□ -0.96
CALD1-223ENST00000496024 SPATA19Q7Z5L4 167 aa9.04□□□□□ -0.96
CALD1-223ENST00000496024 ANKRD46Q86W74 232 aa9.04□□□□□ -0.96
CALD1-223ENST00000496024 RIMKLAQ8IXN7 391 aa9.04□□□□□ -0.96
CALD1-223ENST00000496024 SLC34A3Q8N130 599 aa9.04□□□□□ -0.96
CALD1-223ENST00000496024 OR2L13Q8N349 312 aa9.04□□□□□ -0.96
CALD1-223ENST00000496024 GOLM1Q8NBJ4 401 aa9.04□□□□□ -0.96
CALD1-223ENST00000496024 OR4N2Q8NGD1 307 aa9.04□□□□□ -0.96
CALD1-223ENST00000496024 DIO2Q92813 273 aa9.04□□□□□ -0.96
CALD1-223ENST00000496024 COQ8BQ96D53 544 aa9.04□□□□□ -0.96
CALD1-223ENST00000496024 HSPBAP1Q96EW2 488 aa9.04□□□□□ -0.96
CALD1-223ENST00000496024 MAGEB18Q96M61 343 aa9.04□□□□□ -0.96
CALD1-223ENST00000496024 JSRP1Q96MG2 331 aaPredicted RBP9.04□□□□□ -0.96
CALD1-223ENST00000496024 C7orf26Q96N11 449 aa9.04□□□□□ -0.96
CALD1-223ENST00000496024 OR52B2Q96RD2 323 aa9.04□□□□□ -0.96
CALD1-223ENST00000496024 SLX1AQ9BQ83 275 aa9.04□□□□□ -0.96
CALD1-223ENST00000496024 FAM173AQ9BQD7 235 aa9.04□□□□□ -0.96
CALD1-223ENST00000496024 YIPF4Q9BSR8 244 aa9.04□□□□□ -0.96
CALD1-223ENST00000496024 C3orf14Q9HBI5 128 aa9.04□□□□□ -0.96
CALD1-223ENST00000496024 ACSS1Q9NUB1 689 aaPredicted RBP9.04□□□□□ -0.96
CALD1-223ENST00000496024 AIG1Q9NVV5 245 aa9.04□□□□□ -0.96
CALD1-223ENST00000496024 TUBA8Q9NY65 449 aaPredicted RBP9.04□□□□□ -0.96
CALD1-223ENST00000496024 SEC14L3Q9UDX4 400 aa9.04□□□□□ -0.96
CALD1-223ENST00000496024 GPR55Q9Y2T6 319 aaPredicted RBP9.04□□□□□ -0.96
CALD1-223ENST00000496024 CHCHD2Q9Y6H1 151 aaPredicted RBP9.04□□□□□ -0.96
CALD1-223ENST00000496024 LRRK2Q5S007 2527 aa9.04□□□□□ -0.96
CALD1-223ENST00000496024 PCNX1Q96RV3 2341 aa9.03□□□□□ -0.96
CALD1-223ENST00000496024 USP9XQ93008 2570 aaPredicted RBP9.03□□□□□ -0.96
CALD1-223ENST00000496024 FRG2CA6NGY1 282 aa9.03□□□□□ -0.96
CALD1-223ENST00000496024 ACOX3O15254 700 aa9.03□□□□□ -0.96
CALD1-223ENST00000496024 EMC8O43402 210 aa9.03□□□□□ -0.96
CALD1-223ENST00000496024 HS6ST1O60243 411 aa9.03□□□□□ -0.96
CALD1-223ENST00000496024 CDC40O60508 579 aaKnown RBP eCLIP9.03□□□□□ -0.96
CALD1-223ENST00000496024 PPM1BO75688 479 aa9.03□□□□□ -0.96
CALD1-223ENST00000496024 PDE9AO76083 593 aa9.03□□□□□ -0.96
CALD1-223ENST00000496024 SLITRK5O94991 958 aa9.03□□□□□ -0.96
CALD1-223ENST00000496024 CPSF4O95639 269 aaKnown RBP9.03□□□□□ -0.96
CALD1-223ENST00000496024 CT45A8P0DMV1 189 aa9.03□□□□□ -0.96
CALD1-223ENST00000496024 CT45A9P0DMV2 189 aa9.03□□□□□ -0.96
CALD1-223ENST00000496024 IL12BP29460 328 aa9.03□□□□□ -0.96
CALD1-223ENST00000496024 GABRA3P34903 492 aa9.03□□□□□ -0.96
CALD1-223ENST00000496024 SOAT1P35610 550 aa9.03□□□□□ -0.96
CALD1-223ENST00000496024 KRT20P35900 424 aa9.03□□□□□ -0.96
CALD1-223ENST00000496024 FRKP42685 505 aaPredicted RBP9.03□□□□□ -0.96
CALD1-223ENST00000496024 TDGF1P3P51864 188 aa9.03□□□□□ -0.96
CALD1-223ENST00000496024 DGKQP52824 942 aa9.03□□□□□ -0.96
CALD1-223ENST00000496024 PPIAP62937 165 aaKnown RBP9.03□□□□□ -0.96
CALD1-223ENST00000496024 HSF1Q00613 529 aa9.03□□□□□ -0.96
CALD1-223ENST00000496024 ZNHIT3Q15649 155 aaPredicted RBP9.03□□□□□ -0.96
CALD1-223ENST00000496024 LSM12Q3MHD2 195 aaKnown RBP9.03□□□□□ -0.96
CALD1-223ENST00000496024 SPDYE7PQ495Y7 208 aa9.03□□□□□ -0.96
CALD1-223ENST00000496024 CT45A2Q5DJT8 189 aa9.03□□□□□ -0.96
CALD1-223ENST00000496024 SPANXN4Q5MJ08 99 aa9.03□□□□□ -0.96
CALD1-223ENST00000496024 OGFOD2Q6N063 350 aa9.03□□□□□ -0.96
CALD1-223ENST00000496024 EPGNQ6UW88 154 aa9.03□□□□□ -0.96
CALD1-223ENST00000496024 GK5Q6ZS86 529 aa9.03□□□□□ -0.96
CALD1-223ENST00000496024 ACAD11Q709F0 780 aa9.03□□□□□ -0.96
CALD1-223ENST00000496024 DND1Q8IYX4 353 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms