RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 CCDC3Q9BQI4 270 aa15.25■□□□□ 0.03
CBX4-204ENST00000495122 GABARAPL3Q9BY60 117 aa15.25■□□□□ 0.03
CBX4-204ENST00000495122 AMBRA1Q9C0C7 1298 aa15.25■□□□□ 0.03
CBX4-204ENST00000495122 PRORYQ9H606 182 aa15.25■□□□□ 0.03
CBX4-204ENST00000495122 POLR1BQ9H9Y6 1135 aa15.25■□□□□ 0.03
CBX4-204ENST00000495122 VCX3AQ9NNX9 186 aa15.25■□□□□ 0.03
CBX4-204ENST00000495122 KRT84Q9NSB2 600 aa15.25■□□□□ 0.03
CBX4-204ENST00000495122 KCND3Q9UK17 655 aa15.25■□□□□ 0.03
CBX4-204ENST00000495122 POFUT2Q9Y2G5 429 aa15.25■□□□□ 0.03
CBX4-204ENST00000495122 MAGED1Q9Y5V3 778 aaPredicted RBP15.25■□□□□ 0.03
CBX4-204ENST00000495122 A0A087WV62 115 aa15.24■□□□□ 0.03
CBX4-204ENST00000495122 A0A1W2PNU3 283 aaPredicted RBP15.24■□□□□ 0.03
CBX4-204ENST00000495122 E9PQ18 207 aa15.24■□□□□ 0.03
CBX4-204ENST00000495122 BCKDKO14874 412 aa15.24■□□□□ 0.03
CBX4-204ENST00000495122 P2RX6O15547 441 aa15.24■□□□□ 0.03
CBX4-204ENST00000495122 SLC28A2O43868 658 aa15.24■□□□□ 0.03
CBX4-204ENST00000495122 KALRNO60229 2985 aa15.24■□□□□ 0.03
CBX4-204ENST00000495122 B4GALT2O60909 372 aa15.24■□□□□ 0.03
CBX4-204ENST00000495122 UBXN7O94888 489 aa15.24■□□□□ 0.03
CBX4-204ENST00000495122 CCDC159P0C7I6 412 aa15.24■□□□□ 0.03
CBX4-204ENST00000495122 NR2F1P10589 423 aa15.24■□□□□ 0.03
CBX4-204ENST00000495122 LSSP48449 732 aa15.24■□□□□ 0.03
CBX4-204ENST00000495122 DAPP51397 102 aa15.24■□□□□ 0.03
CBX4-204ENST00000495122 CSNK2BP67870 215 aa15.24■□□□□ 0.03
CBX4-204ENST00000495122 ZIK1Q3SY52 487 aaPredicted RBP15.24■□□□□ 0.03
CBX4-204ENST00000495122 ATAD3BQ5T9A4 648 aa15.24■□□□□ 0.03
CBX4-204ENST00000495122 IGF2-ASQ6U949 168 aa15.24■□□□□ 0.03
CBX4-204ENST00000495122 RBM44Q6ZP01 1051 aaKnown RBP15.24■□□□□ 0.03
CBX4-204ENST00000495122 LINC00471Q8N535 108 aa15.24■□□□□ 0.03
CBX4-204ENST00000495122 CSNK1A1LQ8N752 337 aa15.24■□□□□ 0.03
CBX4-204ENST00000495122 C19orf47Q8N9M1 422 aaKnown RBP15.24■□□□□ 0.03
CBX4-204ENST00000495122 ATG16L2Q8NAA4 619 aa15.24■□□□□ 0.03
CBX4-204ENST00000495122 OR4C15Q8NGM1 316 aa15.24■□□□□ 0.03
CBX4-204ENST00000495122 OR10Q1Q8NGQ4 319 aa15.24■□□□□ 0.03
CBX4-204ENST00000495122 KLHL6Q8WZ60 621 aa15.24■□□□□ 0.03
CBX4-204ENST00000495122 PMM1Q92871 262 aa15.24■□□□□ 0.03
CBX4-204ENST00000495122 ELP4Q96EB1 424 aa15.24■□□□□ 0.03
CBX4-204ENST00000495122 TCTN2Q96GX1 697 aa15.24■□□□□ 0.03
CBX4-204ENST00000495122 MS4A4EQ96PG1 132 aa15.24■□□□□ 0.03
CBX4-204ENST00000495122 MACROD1Q9BQ69 325 aa15.24■□□□□ 0.03
CBX4-204ENST00000495122 TUBA1CQ9BQE3 449 aa15.24■□□□□ 0.03
CBX4-204ENST00000495122 ACTRT3Q9BYD9 372 aa15.24■□□□□ 0.03
CBX4-204ENST00000495122 GRIP2Q9C0E4 1043 aa15.24■□□□□ 0.03
CBX4-204ENST00000495122 SYNPO2LQ9H987 977 aa15.24■□□□□ 0.03
CBX4-204ENST00000495122 ASCL3Q9NQ33 180 aa15.24■□□□□ 0.03
CBX4-204ENST00000495122 EPHA6Q9UF33 1036 aa15.24■□□□□ 0.03
CBX4-204ENST00000495122 DOLKQ9UPQ8 538 aa15.24■□□□□ 0.03
CBX4-204ENST00000495122 U3KQV3 271 aa15.24■□□□□ 0.03
CBX4-204ENST00000495122 B4DGG1 531 aa15.23■□□□□ 0.03
CBX4-204ENST00000495122 ZNF701M0R085 212 aaPredicted RBP15.23■□□□□ 0.03
CBX4-204ENST00000495122 SYT5O00445 386 aa15.23■□□□□ 0.03
CBX4-204ENST00000495122 GALR3O60755 368 aaPredicted RBP15.23■□□□□ 0.03
CBX4-204ENST00000495122 OXSR1O95747 527 aaPredicted RBP15.23■□□□□ 0.03
CBX4-204ENST00000495122 OPN1SWP03999 348 aa15.23■□□□□ 0.03
CBX4-204ENST00000495122 ATP6V1B1P15313 513 aa15.23■□□□□ 0.03
CBX4-204ENST00000495122 LIMS1P48059 325 aa15.23■□□□□ 0.03
CBX4-204ENST00000495122 PDX1P52945 283 aa15.23■□□□□ 0.03
CBX4-204ENST00000495122 EMP3P54852 163 aa15.23■□□□□ 0.03
CBX4-204ENST00000495122 SPIBQ01892 262 aa15.23■□□□□ 0.03
CBX4-204ENST00000495122 TEKQ02763 1124 aa15.23■□□□□ 0.03
CBX4-204ENST00000495122 TCEA2Q15560 299 aa15.23■□□□□ 0.03
CBX4-204ENST00000495122 NDUFA9Q16795 377 aa15.23■□□□□ 0.03
CBX4-204ENST00000495122 MICAQ29983 383 aa15.23■□□□□ 0.03
CBX4-204ENST00000495122 NADK2Q4G0N4 442 aa15.23■□□□□ 0.03
CBX4-204ENST00000495122 DEFB134Q4QY38 66 aa15.23■□□□□ 0.03
CBX4-204ENST00000495122 C3orf38Q5JPI3 329 aa15.23■□□□□ 0.03
CBX4-204ENST00000495122 GARNL3Q5VVW2 1013 aa15.23■□□□□ 0.03
CBX4-204ENST00000495122 FOXB2Q5VYV0 432 aa15.23■□□□□ 0.03
CBX4-204ENST00000495122 ZCCHC12Q6PEW1 402 aa15.23■□□□□ 0.03
CBX4-204ENST00000495122 ZNF773Q6PK81 442 aa15.23■□□□□ 0.03
CBX4-204ENST00000495122 TSEN54Q7Z6J9 526 aaKnown RBP15.23■□□□□ 0.03
CBX4-204ENST00000495122 TSPYL5Q86VY4 417 aaPredicted RBP15.23■□□□□ 0.03
CBX4-204ENST00000495122 SPACA3Q8IXA5 215 aa15.23■□□□□ 0.03
CBX4-204ENST00000495122 OFCC1Q8IZS5 231 aa15.23■□□□□ 0.03
CBX4-204ENST00000495122 HS3ST5Q8IZT8 346 aa15.23■□□□□ 0.03
CBX4-204ENST00000495122 ARL14Q8N4G2 192 aa15.23■□□□□ 0.03
CBX4-204ENST00000495122 NUP43Q8NFH3 380 aa15.23■□□□□ 0.03
CBX4-204ENST00000495122 NCSTNQ92542 709 aa15.23■□□□□ 0.03
CBX4-204ENST00000495122 DHRS1Q96LJ7 313 aa15.23■□□□□ 0.03
CBX4-204ENST00000495122 TRNT1Q96Q11 434 aaKnown RBP15.23■□□□□ 0.03
CBX4-204ENST00000495122 TREX2Q9BQ50 279 aaPredicted RBP15.23■□□□□ 0.03
CBX4-204ENST00000495122 SERHL2Q9H4I8 314 aa15.23■□□□□ 0.03
CBX4-204ENST00000495122 ENAMQ9NRM1 1142 aa15.23■□□□□ 0.03
CBX4-204ENST00000495122 TRPC4Q9UBN4 977 aa15.23■□□□□ 0.03
CBX4-204ENST00000495122 SEC14L3Q9UDX4 400 aa15.23■□□□□ 0.03
CBX4-204ENST00000495122 SATB2Q9UPW6 733 aa15.23■□□□□ 0.03
CBX4-204ENST00000495122 SLC9A8Q9Y2E8 581 aa15.23■□□□□ 0.03
CBX4-204ENST00000495122 COMMD3-BMI1R4GMX3 469 aa15.23■□□□□ 0.03
CBX4-204ENST00000495122 GCN1Q92616 2671 aaKnown RBP15.22■□□□□ 0.03
CBX4-204ENST00000495122 NTN3O00634 580 aaPredicted RBP15.22■□□□□ 0.03
CBX4-204ENST00000495122 PRAMEF10O60809 474 aa15.22■□□□□ 0.03
CBX4-204ENST00000495122 ATP1B1P05026 303 aa15.22■□□□□ 0.03
CBX4-204ENST00000495122 HMGN2P05204 90 aaKnown RBP15.22■□□□□ 0.03
CBX4-204ENST00000495122 FESP07332 822 aa15.22■□□□□ 0.03
CBX4-204ENST00000495122 OR12D1P0DN82 309 aa15.22■□□□□ 0.03
CBX4-204ENST00000495122 PORP16435 677 aaPredicted RBP15.22■□□□□ 0.03
CBX4-204ENST00000495122 CDH3P22223 829 aa15.22■□□□□ 0.03
CBX4-204ENST00000495122 PRKACGP22612 351 aa15.22■□□□□ 0.03
CBX4-204ENST00000495122 XKP51811 444 aa15.22■□□□□ 0.03
CBX4-204ENST00000495122 RAB38P57729 211 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms