RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 CPN1P15169 458 aa20.1■□□□□ 0.81
HDDC3-203ENST00000494993 CNTFP26441 200 aa20.1■□□□□ 0.81
HDDC3-203ENST00000494993 PPICP45877 212 aa20.1■□□□□ 0.81
HDDC3-203ENST00000494993 SLCO1A2P46721 670 aa20.1■□□□□ 0.81
HDDC3-203ENST00000494993 EMDP50402 254 aa20.1■□□□□ 0.81
HDDC3-203ENST00000494993 CDH13P55290 713 aa20.1■□□□□ 0.81
HDDC3-203ENST00000494993 FOXD4Q12950 439 aaPredicted RBP20.1■□□□□ 0.81
HDDC3-203ENST00000494993 LTB4RQ15722 352 aa20.1■□□□□ 0.81
HDDC3-203ENST00000494993 TRMT12Q53H54 448 aaKnown RBP20.1■□□□□ 0.81
HDDC3-203ENST00000494993 FBXW10Q5XX13 1052 aa20.1■□□□□ 0.81
HDDC3-203ENST00000494993 LINC01560Q8TB33 94 aa20.1■□□□□ 0.81
HDDC3-203ENST00000494993 CNRIP1Q96F85 164 aaPredicted RBP20.1■□□□□ 0.81
HDDC3-203ENST00000494993 ZNF681Q96N22 645 aa20.1■□□□□ 0.81
HDDC3-203ENST00000494993 TUBA1CQ9BQE3 449 aa20.1■□□□□ 0.81
HDDC3-203ENST00000494993 FAIM2Q9BWQ8 316 aa20.1■□□□□ 0.81
HDDC3-203ENST00000494993 C1QTNF3Q9BXJ4 246 aa20.1■□□□□ 0.81
HDDC3-203ENST00000494993 OR2B2Q9GZK3 357 aa20.1■□□□□ 0.81
HDDC3-203ENST00000494993 MRPL46Q9H2W6 279 aaKnown RBP20.1■□□□□ 0.81
HDDC3-203ENST00000494993 SERHLQ9NQF3 203 aa20.1■□□□□ 0.81
HDDC3-203ENST00000494993 NMRK1Q9NWW6 199 aa20.1■□□□□ 0.81
HDDC3-203ENST00000494993 TRPS1Q9UHF7 1281 aa20.1■□□□□ 0.81
HDDC3-203ENST00000494993 A8MT66 165 aa20.09■□□□□ 0.81
HDDC3-203ENST00000494993 TO15178 435 aa20.09■□□□□ 0.81
HDDC3-203ENST00000494993 CBR3O75828 277 aa20.09■□□□□ 0.81
HDDC3-203ENST00000494993 RAF1P04049 648 aa20.09■□□□□ 0.81
HDDC3-203ENST00000494993 PCSK2P16519 638 aa20.09■□□□□ 0.81
HDDC3-203ENST00000494993 TSPAN8P19075 237 aa20.09■□□□□ 0.81
HDDC3-203ENST00000494993 DRD5P21918 477 aa20.09■□□□□ 0.81
HDDC3-203ENST00000494993 ALDH9A1P49189 494 aa20.09■□□□□ 0.81
HDDC3-203ENST00000494993 TRA2BP62995 288 aaKnown RBP20.09■□□□□ 0.81
HDDC3-203ENST00000494993 MRPS35P82673 323 aaKnown RBP20.09■□□□□ 0.81
HDDC3-203ENST00000494993 FAM219BQ5XKK7 198 aa20.09■□□□□ 0.81
HDDC3-203ENST00000494993 FAM180BQ6P0A1 224 aa20.09■□□□□ 0.81
HDDC3-203ENST00000494993 C1orf52Q8N6N3 182 aaKnown RBP20.09■□□□□ 0.81
HDDC3-203ENST00000494993 WDSUB1Q8N9V3 476 aa20.09■□□□□ 0.81
HDDC3-203ENST00000494993 OR14L1PQ8NHC6 308 aa20.09■□□□□ 0.81
HDDC3-203ENST00000494993 ZNF225Q9UK10 706 aa20.09■□□□□ 0.81
HDDC3-203ENST00000494993 ZNF780BQ9Y6R6 833 aa20.09■□□□□ 0.81
HDDC3-203ENST00000494993 FRG2CA6NGY1 282 aa20.08■□□□□ 0.81
HDDC3-203ENST00000494993 ERN1O75460 977 aaKnown RBP20.08■□□□□ 0.81
HDDC3-203ENST00000494993 GOSR1O95249 250 aa20.08■□□□□ 0.81
HDDC3-203ENST00000494993 SBK3P0C264 359 aa20.08■□□□□ 0.81
HDDC3-203ENST00000494993 FOXF2Q12947 444 aa20.08■□□□□ 0.81
HDDC3-203ENST00000494993 ENPP6Q6UWR7 440 aa20.08■□□□□ 0.81
HDDC3-203ENST00000494993 ADGRE4PQ86SQ3 457 aa20.08■□□□□ 0.81
HDDC3-203ENST00000494993 RDH11Q8TC12 318 aa20.08■□□□□ 0.81
HDDC3-203ENST00000494993 ZFP3Q96NJ6 502 aa20.08■□□□□ 0.81
HDDC3-203ENST00000494993 HBEGFQ99075 208 aa20.08■□□□□ 0.81
HDDC3-203ENST00000494993 SFXN3Q9BWM7 321 aa20.08■□□□□ 0.81
HDDC3-203ENST00000494993 UTS2RQ9UKP6 389 aa20.08■□□□□ 0.81
HDDC3-203ENST00000494993 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.08■□□□□ 0.81
HDDC3-203ENST00000494993 PCNX3Q9H6A9 2034 aa20.08■□□□□ 0.8
HDDC3-203ENST00000494993 OR6C70A6NIJ9 312 aa20.07■□□□□ 0.8
HDDC3-203ENST00000494993 TRIM49D1C9J1S8 452 aa20.07■□□□□ 0.8
HDDC3-203ENST00000494993 H0Y3Z8 333 aa20.07■□□□□ 0.8
HDDC3-203ENST00000494993 OR4F21O95013 312 aa20.07■□□□□ 0.8
HDDC3-203ENST00000494993 RCBTB2O95199 551 aa20.07■□□□□ 0.8
HDDC3-203ENST00000494993 ATE1O95260 518 aa20.07■□□□□ 0.8
HDDC3-203ENST00000494993 ADAM8P78325 824 aa20.07■□□□□ 0.8
HDDC3-203ENST00000494993 SRYQ05066 204 aa20.07■□□□□ 0.8
HDDC3-203ENST00000494993 TRIM42Q8IWZ5 723 aa20.07■□□□□ 0.8
HDDC3-203ENST00000494993 TMEM151AQ8N4L1 468 aa20.07■□□□□ 0.8
HDDC3-203ENST00000494993 ZNF675Q8TD23 568 aa20.07■□□□□ 0.8
HDDC3-203ENST00000494993 DCAKDQ8WVC6 231 aa20.07■□□□□ 0.8
HDDC3-203ENST00000494993 TMBIM1Q969X1 311 aa20.07■□□□□ 0.8
HDDC3-203ENST00000494993 TMCO6Q96DC7 493 aa20.07■□□□□ 0.8
HDDC3-203ENST00000494993 COL21A1Q96P44 957 aa20.07■□□□□ 0.8
HDDC3-203ENST00000494993 TM9SF2Q99805 663 aa20.07■□□□□ 0.8
HDDC3-203ENST00000494993 RBM24Q9BX46 236 aaKnown RBP20.07■□□□□ 0.8
HDDC3-203ENST00000494993 TSPYL1Q9H0U9 437 aa20.07■□□□□ 0.8
HDDC3-203ENST00000494993 PLEKHF2Q9H8W4 249 aa20.07■□□□□ 0.8
HDDC3-203ENST00000494993 DLL4Q9NR61 685 aa20.07■□□□□ 0.8
HDDC3-203ENST00000494993 HEY2Q9UBP5 337 aa20.07■□□□□ 0.8
HDDC3-203ENST00000494993 VPS29Q9UBQ0 182 aa20.07■□□□□ 0.8
HDDC3-203ENST00000494993 ZNF180Q9UJW8 692 aa20.07■□□□□ 0.8
HDDC3-203ENST00000494993 GPR55Q9Y2T6 319 aaPredicted RBP20.07■□□□□ 0.8
HDDC3-203ENST00000494993 CLCA1A8K7I4 914 aa20.06■□□□□ 0.8
HDDC3-203ENST00000494993 POC1B-GALNT4F8VUJ3 575 aa20.06■□□□□ 0.8
HDDC3-203ENST00000494993 REM1O75628 298 aa20.06■□□□□ 0.8
HDDC3-203ENST00000494993 BCAS2O75934 225 aaPredicted RBP20.06■□□□□ 0.8
HDDC3-203ENST00000494993 ESRRBO95718 433 aa20.06■□□□□ 0.8
HDDC3-203ENST00000494993 HSD3B1P14060 373 aa20.06■□□□□ 0.8
HDDC3-203ENST00000494993 HSD3B2P26439 372 aa20.06■□□□□ 0.8
HDDC3-203ENST00000494993 HSD17B3P37058 310 aa20.06■□□□□ 0.8
HDDC3-203ENST00000494993 GFRA1P56159 465 aa20.06■□□□□ 0.8
HDDC3-203ENST00000494993 HMGCS1Q01581 520 aa20.06■□□□□ 0.8
HDDC3-203ENST00000494993 CLCQ05315 142 aa20.06■□□□□ 0.8
HDDC3-203ENST00000494993 KEAP1Q14145 624 aa20.06■□□□□ 0.8
HDDC3-203ENST00000494993 ZNF628Q5EBL2 1059 aa20.06■□□□□ 0.8
HDDC3-203ENST00000494993 TCHHL1Q5QJ38 904 aaPredicted RBP20.06■□□□□ 0.8
HDDC3-203ENST00000494993 IFNEQ86WN2 208 aa20.06■□□□□ 0.8
HDDC3-203ENST00000494993 PLCZ1Q86YW0 608 aa20.06■□□□□ 0.8
HDDC3-203ENST00000494993 SLC35A4Q96G79 324 aa20.06■□□□□ 0.8
HDDC3-203ENST00000494993 BTBD9Q96Q07 612 aa20.06■□□□□ 0.8
HDDC3-203ENST00000494993 UCN2Q96RP3 112 aa20.06■□□□□ 0.8
HDDC3-203ENST00000494993 YIPF4Q9BSR8 244 aa20.06■□□□□ 0.8
HDDC3-203ENST00000494993 PFDN4Q9NQP4 134 aa20.06■□□□□ 0.8
HDDC3-203ENST00000494993 MCM8Q9UJA3 840 aa20.06■□□□□ 0.8
HDDC3-203ENST00000494993 WIF1Q9Y5W5 379 aa20.06■□□□□ 0.8
HDDC3-203ENST00000494993 MANBAO00462 879 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms